
Lijun Shen Institute of Automation, Chinese Academy of Sciences
Email: lijun.shen@ia.ac.cn
Address: Room 207A, Automation Building, No. 95 Zhongguancun East Road, Haidian District, Beijing
Postal Code: 100190
Research Areas
Education
2016.9 – 2021.2, Macau University of Science and Technology, Ph.D.
2007.9 – 2010.7, Inner Mongolia University of Technology, Master's Degree
2000.9 – 2004.7, Northwest University, Bachelor's Degree
Experience
Work Experience
2021.4 – , Institute of Automation, Chinese Academy of Sciences, Associate Researcher
2013.6 – 2021.3, Institute of Automation, Chinese Academy of Sciences, Engineer
2010.7 – 2013.5, Institute of Automation, Chinese Academy of Sciences, Assistant Engineer
Publications
Papers
(1) A novel registration method for long-serial section images of EM with a serial split technique based on unsupervised optical flow network, BIOINFORMATICS, 2023.
(2) Fear memory-associated synaptic and mitochondrial changes revealed by deep learning-based processing of electron microscopy data, CELL REPORTS, 2022.
(3) Joint reconstruction of neuron and ultrastructure via connectivity consensus in electron microscope volumes, BMC Bioinformatics, 2022.
(4) Denoising of scanning electron microscope images for biological ultrastructure enhancement, JOURNAL OF BIOINFORMATICS AND COMPUTATIONAL BIOLOGY, 2022.
(5) Geolocation Error Estimation and Correction on Long-Term MWRI Data, IEEE TRANSACTIONS ON GEOSCIENCE AND REMOTE SENSING, 2021.
(6) Human attention-inspired volume reconstruction method on serial section electron microscopy images, CYTOMETRY PART A, 2021.
(7) Quality metrology of carbon nanotube thin films and its application for carbon nanotube-based electronics, Quality metrology of carbon nanotube thin films and its application for carbon nanotube-based electronics, NANO RESEARCH, 2020.
(8) A New Geolocation Error Estimation Method in MWRI Data Aboard FY3 Series Satellites, IEEE GEOSCIENCE AND REMOTE SENSING LETTERS, 2020.
(9) Massive Data Management and Sharing Module for Connectome Reconstruction, BRAIN SCIENCES, 2020.
(10) L(0 )sparse approximation of coastline inflection method on fy-3c mwri data, IEEE GEOSCIENCE AND REMOTE SENSING LETTERS, 2019.
(11) l(p)-ICP Coastline Inflection Method for Geolocation Error Estimation in FY-3 MWRI Data, REMOTESENSING, 2019.
(12) Skeleton-based Image Registration of Serial Electron Microscopy Sections, MEDICAL IMAGING 2019: DIGITAL PATHOLOGY, 2019.
(13) MORPHOLOGY-RETAINED NON-LINEAR IMAGE REGISTRATION OF SERIAL ELECTRON MICROSCOPY SECTIONS, 2018 25TH IEEE INTERNATIONAL CONFERENCE ON IMAGE PROCESSING (ICIP), 2018.
(14) Large-area and highly uniform carbon nanotube film for high-performance thin film transistors, NANO RESEARCH, 2018.
(15) Morphology-Retained Non-Linear Image Registration of Serial Electron Microscopy Sections, 2018 25TH IEEE INTERNATIONAL CONFERENCE ON IMAGE PROCESSING (ICIP), 2018.
(16) Large-area and highly uniform carbon nanotube film for nigh-performance thin film transistors, Large-area and highly uniform carbon nanotube film for nigh-performance thin film transistors, Nano Reseash, 2018.
(17) Efficient and Quantitative Characterization of Carbon Nanotube Thin Films, 2018 9TH INTHERNATIONAL CONFERENCE ON COMPUTER AIDED DESIGN FOR THIN-FILM TRANSISTORS (CAD-TFT), 2018.
(18) An Efficient Method for Neuronal Tracking in Electron Microscopy Images, 2017 IEEE INTERNATIONAL CONFERENCE ON MECHATRONICS AND AUTOMATION (ICMA), 2017.
(19) Deep Learning and Shapes Similarity for Joint Segmentation and Tracing single Neurons in SEM images, MEDICAL IMAGING 2017: IMAGE PROCESSING, 2017.
(20) Research on Microscopic Brain Reconstruction Systems, Micro reconstruction system for brain, Systems Engineering — Theory & Practice, 2017.
(21) Deep Learning and Shapes Similarity for Joint Segmentation and Tracing single Neurons in SEM images, MEDICAL IMAGING 2017: IMAGE PROCESSING, 2017.
(22) Automatically Segmenting and Reconstructing Neurons in SEM images, 2016 IEEE INTERNATIONAL CONFERENCE ON MECHATRONICS AND AUTOMATION, 2016.
(23) Automatically Segmenting and Reconstructing Neurons in SEM images, ICMA2016 PROCEEDINGS, 2016.
(24) Wrinkle Image Registration for Serial Microscopy Sections, 2015 11TH INTERNATIONAL CONFERENCE ON SIGNAL-IMAGE TECHNOLOGY & INTERNET-BASED SYSTEMS (SITIS), 2015.
(25) Image super-resolution based on null space pursuit, INTERNATIONAL CONGRESS ON IMAGE AND SIGNAL PROCESSING (CISP), 2010.
Patents
(1) A System and Method for Acquiring 3D Images of Scanning Electron Microscope for Serial Sections, Invention Patent, 2022, 3rd Author, Patent No.: CN114049252A
(2) Method and System for Automatic Recognition of Metal Circular Holes in Integrated Circuits Based on Electron Microscope Images, Authorized Patent, 2021, 1st Author, Patent No.: CN112200164A
(3) Rapid Virus Detection System Combining Scanning Electron Microscope Transmission Mode and Transmission Electron Microscope, Invention Patent, 2021, 1st Author, Patent No.: CN112381817A
(4) Automatic Stitching Method, System, and Device for Microscopic Serial Images Based on Affine Transformation, Authorized Patent, 2021, 4th Author, Patent No.: CN112381718A
(5) Method, System, and Device for Behavior Analysis of Caged Animals Based on Siamese Networks, Invention Patent, 2020, 3rd Author, Patent No.: CN111582214A
(6) Large-Field Optical Microscope Imaging Device and Method, Authorized Patent, 2019, 3rd Author, Patent No.: CN109283679A
(7) Microscopic Serial Image Stitching Method and Device, Invention Patent, 2019, 3rd Author, Patent No.: CN109584156A
(8) Microscopic Serial Image Stitching Method and Device, 2022, 3rd Author, Patent No.: CN109584156B
(9) Grayscale Correction Method and Device in Microscopic Image Stitching, Invention Patent, 2018, 4th Author, Patent No.: CN107958442A
(10) Real-Time Registration Device and Method for Scanning Electron Microscope Images for Serial Sections, Authorized Patent, 2018, 5th Author, Patent No.: CN108038874A
(11) Registration Method and Device for Microscopic Images of Biological Tissue Serial Sections, Authorized Patent, 2018, 4th Author, Patent No.: CN107545567A
(12) Synapse Detection Method Based on Electron Microscope Serial Section Images, Authorized Patent, 2017, 4th Author, Patent No.: CN106407988A
(13) Synapse Detection Method Based on Two-Photon Images, Authorized Patent, 2017, 3rd Author, Patent No.: CN106373116A
(14) Image Restoration Method Using Wavelet Neighborhood Gaussian Model, Invention Patent, 2014, 4th Author, Patent No.: CN106508111B
(15) Similar Scale Image Fusion Method Based on Multi-Scale Basic Patterns, Invention Patent, 2014, 6th Author, Patent No.: CN106508048B
(16) Method for Image Fusion Using Adaptive Multi-Scale Basic Patterns, Invention Patent, 2014, 1st Author, Patent No.: CN106508047B
(17) Super-Resolution Reconstruction Method Based on Edge-Preserving Adaptive Decomposition of Images, Invention Patent, 2014, 4th Author, Patent No.: CN106508045B
(18) Time-Frequency Image Analysis Method Based on Band-Limited 2D EMD and Gabor Adaptive Filtering, Invention Patent, 2014, 4th Author, Patent No.: CN106508110B