
Yong HOU Male Doctoral Supervisor
Email: houyong@genomics.cn
Address: Building 11, Beishan Industrial Zone, Yantian District, Shenzhen (518083)
Research Areas
Education
2011-07--2014-01 Southeast University Master
2007-08--2011-06 Southeast University Bachelor
Professional Admission
PhD:
0710Z1 Genomics
Master:
0710Z1 Genomics
0710J3 Bioinformatics
086000 Biomedicine
Work Experience
President, BGI Group Europe
Director, Shenzhen Key Laboratory of Single-cell Omics
Publications
(1) Nanoparticles in Biology and Medicine, Humana Press, 2012-06, Third Author
(2) Single Cell Biomedicine, Spring Nature, 2018-05, Fifth Author
Papers
[1] Sun, Yunfan, Wu, Liang, Zhong, Yu, Zhou, Kaiqian, Hou, Yong, Wang, Zifei, Zhang, Zefan, Xie, Jiarui, Wang, Chunqing, Chen, Dandan, Huang, Yaling, Wei, Xiaochan, Shi, Yinghong, Zhao, Zhikun, Li, Yuehua, Guo, Ziwei, Yu, Qichao, Xu, Liqin, Volpe, Giacomo, Qiu, Shuangjian, Zhou, Jian, Ward, Carl, Sun, Huichuan, Yin, Ye, Xu, Xun, Wang, Xiangdong, Esteban, Miguel A, Yang, Huanming, Wang, Jian, Dean, Michael, Zhang, Yaguang, Liu, Shiping, Yang, Xinrong, Fan, Jia. Single-cell landscape of the ecosystem in early-relapse hepatocellular carcinoma. CELL[J]. 2021, 184(2): 404-+, http://dx.doi.org/10.1016/j.cell.2020.11.041.
[2] Liu, Xiaomin, Tang, Shanmei, Zhong, Huanzi, Tong, Xin, Jie, Zhuye, Ding, Qiuxia, Wang, Dan, Guo, Ruidong, Xiao, Liang, Xu, Xun, Yang, Huanming, Wang, Jian, Zong, Yang, Liu, Weibin, Liu, Xiao, Zhang, Yong, Brix, Susanne, Kristiansen, Karsten, Hou, Yong, Jia, Huijue, Zhang, Tao. A genome-wide association study for gut metagenome in Chinese adults illuminates complex diseases. CELL DISCOVERY[J]. 2021, 7(1): https://www.webofscience.com/wos/woscc/full-record/WOS:000616758600001.
[3] Guallar, Diana, FuentesIglesias, Alejandro, Souto, Yara, Ameneiro, Cristina, FreireAgulleiro, Oscar, Angel Pardavila, Jose, Escudero, Adriana, GarciaOuteiral, Vera, Moreira, Tiago, Saenz, Carmen, Xiong, Heng, Liu, Dongbing, Xiao, Shidi, Hou, Yong, Wu, Kui, Torrecilla, Daniel, Hartner, Jochen C, Blanco, Miguel G, Lee, Leo J, Lopez, Miguel, Walkley, Carl R, Wang, Jianlong, Fidalgo, Miguel. ADAR1-Dependent RNA Editing Promotes MET and iPSC Reprogramming by Alleviating ER Stress. CELL STEM CELL[J]. 2020, 27(2): 300-+, http://dx.doi.org/10.1016/j.stem.2020.04.016.
[4] Zhang, Wei, Wang, Longlong, Liu, Ke, Wei, Xiaofeng, Yang, Kai, Du, Wensi, Wang, Shiyu, Guo, Nannan, Ma, Chuanchuan, Luo, Lihua, Wu, Jinghua, Lin, Liya, Yang, Fan, Gao, Fei, Wang, Xie, Li, Tao, Zhang, Ruifang, Saksena, Nitin K, Yang, Huanming, Wang, Jian, Fang, Lin, Hou, Yong, Xu, Xun, Liu, Xiao. PIRD: Pan Immune Repertoire Database. BIOINFORMATICS[J]. 2020, 36(3): 897-903, https://www.webofscience.com/wos/woscc/full-record/WOS:000515095200032.
[5] Lei, Haoyun, Lyu, Bochuan, Gertz, E Michael, Schaffer, Alejandro A, Shi, Xulian, Wu, Kui, Li, Guibo, Xu, Liqin, Hou, Yong, Dean, Michael, Schwartz, Russell. Tumor Copy Number Deconvolution Integrating Bulk and Single-Cell Sequencing Data. JOURNAL OF COMPUTATIONAL BIOLOGY[J]. 2020, 27(4): 565-598, https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7185355/.
[6] Calabrese, Claudia, Davidson, Natalie R, Demircioglu, Deniz, Fonseca, Nuno A, He, Yao, Kahles, Andre, KjongVan Lehmann, Liu, Fenglin, Shiraishi, Yuichi, Soulette, Cameron M, Urban, Lara, Greger, Liliana, Li, Siliang, Liu, Dongbing, Perry, Marc D, Xiang, Qian, Zhang, Fan, Zhang, Junjun, Bailey, Peter, Erkek, Serap, Hoadley, Katherine A, Hou, Yong, Huska, Matthew R, Kilpinen, Helena, Korbel, Jan O, Marin, Maximillian G, Markowski, Julia, Nandi, Tannistha, PanHammarstrom, Qiang, Pedamallu, Chandra Sekhar, Siebert, Reiner, Stark, Stefan G, Su, Hong, Tan, Patrick, Waszak, Sebastian M, Yung, Christina, Zhu, Shida, Awadalla, Philip, Creighton, Chad J, Meyerson, Matthew, Ouellette, B F Francis, Wu, Kui, Yang, Huanming, Brazma, Alvis, Brooks, Angela N, Goke, Jonathan, Raetsch, Gunnar, Schwarz, Roland F, Stegle, Oliver, Zhang, Zemin, PCAWG Transcriptome Core Grp, PCAWG Transcriptome Working Grp, PCAWG Consortium. Genomic basis for RNA alterations in cancer. NATURE[J]. 2020, 578(7793): 129-+, https://www.webofscience.com/wos/woscc/full-record/WOS:000529097800012.
[7] Yi, Gang, Zhao, Yi, Xie, Feng, Zhu, Fuxiang, Wan, Ziyun, Wang, Jingwan, Wang, Xie, Gao, Kai, Cao, Lixia, Li, Xinyang, Chen, Chen, Kuang, Yashu, Qiu, Xiu, Yang, Huanming, Wang, Jian, Su, Bing, Chen, Lei, Zhang, Wei, Hou, Yong, Xu, Xun, He, Yinyan, Tsun, Andy, Liu, Xiao, Li, Bin. Single-cell RNA-seq unveils critical regulators of human FOXP3(+) regulatory T cell stability. SCIENCE BULLETIN[J]. 2020, 65(13): 1114-1124, http://dx.doi.org/10.1016/j.scib.2020.01.002.
[8] Gao, Qianqian, Ouyang, Wenjie, Kang, Bin, Han, Xu, Xiong, Ying, Ding, Renpeng, Li, Yijian, Wang, Fei, Huang, Lei, Chen, Lei, Wang, Dan, Dong, Xuan, Zhang, Zhao, Li, Yanshan, Ze, Baichen, Hou, Yong, Yang, Huanming, Ma, Yuanyuan, Gu, Ying, Chao, ChengChi. Selective targeting of the oncogenic KRAS G12S mutant allele by CRISPR/Cas9 induces efficient tumor regression. THERANOSTICS[J]. 2020, 10(11): 5137-5153, https://www.webofscience.com/wos/woscc/full-record/WOS:000534489700016.
[9] Wang, Mingyue, Liu, Yang, Wen, Tinggang, Liu, Weiwei, Gao, Qionghua, Zhao, Jie, Xiong, Zijun, Wang, Zhifeng, Jiang, Wei, Yu, Yeya, Wu, Liang, Yuan, Yue, Wei, Xiaoyu, Xu, Jiangshan, Cheng, Mengnan, Zhang, Pei, Li, Panyi, Hou, Yong, Yang, Huanming, Zhang, Guojie, Li, Qiye, Liu, Chuanyu, Liu, Longqi. Chromatin accessibility and transcriptome landscapes of Monomorium pharaonisbrain. SCIENTIFIC DATA[J]. 2020, 7(1): http://dx.doi.org/10.1038/s41597-020-0556-x.
[10] Mu, Tianhao, Xu, Liqin, Zhong, Yu, Liu, Xinyu, Zhao, Zhikun, Huang, Chaoben, Lan, Xiaofeng, Lufei, Chengchen, Zhou, Yi, Su, Yixun, Xu, Luang, Jiang, Miaomiao, Zhou, Hongpo, Lin, Xinxin, Wu, Liang, Peng, Siqi, Liu, Shiping, Brix, Susanne, Dean, Michael, Dunn, Norris R, Zaret, Kenneth S, Fu, XinYuan, Hou, Yong. Embryonic liver developmental trajectory revealed by single-cell RNA sequencing in the Foxa2(eGFP) mouse. COMMUNICATIONS BIOLOGY[J]. 2020, 3(1): https://www.webofscience.com/wos/woscc/full-record/WOS:000591682900001.
[11] Jin, Haoxuan, Huang, Xiaoyan, Shao, Kang, Li, Guibo, Wang, Jian, Yang, Huanming, Hou, Yong. Integrated bioinformatics analysis to identify 15 hub genes in breast cancer. ONCOLOGY LETTERS[J]. 2019, 18(2): 1023-1034, https://www.webofscience.com/wos/woscc/full-record/WOS:000476990900007.
[12] Longqi Liu, Chuanyu Liu, Andrs Quintero, Liang Wu, Yue Yuan, Mingyue Wang, Mengnan Cheng, Lizhi Leng, Liqin Xu, Guoyi Dong, Rui Li, Yang Liu, Xiaoyu Wei, Jiangshan Xu, Xiaowei Chen, Haorong Lu, Dongsheng Chen, Quanlei Wang, Qing Zhou, Xinxin Lin, Guibo Li, Shiping Liu, Qi Wang, Hongru Wang, J Lynn Fink, Zhengliang Gao, Xin Liu, Yong Hou, Shida Zhu, Huanming Yang, Yunming Ye, Ge Lin, Fang Chen, Carl Herrmann, Roland Eils, Zhouchun Shang, Xun Xu. Deconvolution of single-cell multi-omics layers reveals regulatory heterogeneity. Nature Communications[J]. 2019, 10(1): 1-10, http://119.78.100.205/handle/311034/9253.
[13] Zou, Yuanqiang, Xue, Wenbin, Luo, Guangwen, Deng, Ziqing, Qin, Panpan, Guo, Ruijin, Sun, Haipeng, Xia, Yan, Liang, Suisha, Dai, Ying, Wan, Daiwei, Jiang, Rongrong, Su, Lili, Feng, Qiang, Jie, Zhuye, Guo, Tongkun, Xia, Zhongkui, Liu, Chuan, Yu, Jinghong, Lin, Yuxiang, Tang, Shanmei, Huo, Guicheng, Xu, Xun, Hou, Yong, Liu, Xin, Wang, Jian, Yang, Huanming, Kristiansen, Karsten, Li, Junhua, Jia, Huijue, Xiao, Liang. 1,520 reference genomes from cultivated human gut bacteria enable functional microbiome analyses. NATURE BIOTECHNOLOGY[J]. 2019, 37(2): 179-+, https://www.webofscience.com/wos/woscc/full-record/WOS:000457576400022.
[14] Natarajan, Kedar Nath, Miao, Zhichao, Jiang, Miaomiao, Huang, Xiaoyun, Zhou, Hongpo, Xie, Jiarui, Wang, Chunqing, Qin, Shishang, Zhao, Zhikun, Wu, Liang, Yang, Naibo, Li, Bo, Hou, Yong, Liu, Shiping, Teichmann, Sarah A. Comparative analysis of sequencing technologies for single-cell transcriptomics. GENOME BIOLOGY[J]. 2019, 20(1): https://doaj.org/article/66b4691e7a7a49749d396ac0be8abd99.
[15] Guo, Jianping, Zhang, Tao, Cao, Hongzhi, Li, Xiaowei, Liang, Hao, Liu, Mengru, Zou, Yundong, Zhang, Yuanwei, Wang, Yuxuan, Sun, Xiaolin, Hu, Fanlei, Du, Yan, Mo, Xiaodong, Liu, Xu, Yang, Yue, Yang, Huanjie, Wu, Xinyu, Zhang, Xuewu, Jia, Huijue, Jiang, Hui, Hou, Yong, Liu, Xin, Su, Yin, Zhang, Mingrong, Yang, Huanming, Wang, Jian, Sun, Liangdan, Liu, Liang, Padyukov, Leonid, Lai, Luhua, Yamamoto, Kazuhiko, Zhang, Xuejun, Klareskog, Lars, Xu, Xun, Li, Zhanguo. Sequencing of the MHC region defines HLA-DQA1 as the major genetic risk for seropositive rheumatoid arthritis in Han Chinese population. ANNALS OF THE RHEUMATIC DISEASES[J]. 2019, 78(6): 773-780, [16] Yin, Jianhua, Wang, Zhifeng, Li, Guibo, Lin, Feng, Shao, Kang, Cao, Boyang, Hou, Yong. Characterization of circulating tumor cells in breast cancer patients by spiral microfluidics. CELL BIOLOGY AND TOXICOLOGY[J]. 2019, 35(1): 59-66, [17] Zhao, Yi, Li, Xiao, Zhao, Weihua, Wang, Jingwan, Yu, Jiawei, Wan, Ziyun, Gao, Kai, Yi, Gang, Wang, Xie, Fan, Bingbing, Wu, Qinkai, Chen, Bangwei, Xie, Feng, Wu, Jinghua, Zhang, Wei, Chen, Fang, Yang, Huanming, Wang, Jian, Xu, Xun, Li, Bin, Liu, Shiping, Hou, Yong, Liu, Xiao. Single-cell transcriptomic landscape of nucleated cells in umbilical cord blood. GIGASCIENCE[J]. 2019, 8(5): https://www.webofscience.com/wos/woscc/full-record/WOS:000474856100008.
[18] Zhu, Zhongyi, Qiu, Si, Shao, Kang, Hou, Yong. Progress and challenges of sequencing and analyzing circulating tumor cells. CELL BIOLOGY AND TOXICOLOGYnull. 2018, 34(5): 405-415, https://www.webofscience.com/wos/woscc/full-record/WOS:000442997300006.
[19] Zhao, Xin, Liu, Xiaomin, Zhang, Aiping, Chen, Huashuai, Huo, Qing, Li, Weiyang, Ye, Rui, Chen, Zhihua, Liang, Liping, Liu, Qiong A, Shen, Juan, Jin, Xin, Li, Wenwen, Nygaard, Marianne, Liu, Xiao, Hou, Yong, Ni, Ting, Bolund, Lars, Gottschalk, William, Tao, Wei, Gu, Jun, Tian, XiaoLi, Yang, Huanming, Wang, Jian, Xu, Xun, Lutz, Michael W, Min, Junxia, Zeng, Yi, Nie, Chao. The correlation of copy number variations with longevity in a genome-wide association study of Han Chinese. AGING-US[J]. 2018, 10(6): 1206-1222, https://www.webofscience.com/wos/woscc/full-record/WOS:000437446300007.
[20] Ren, Shancheng, Wei, GongHong, Liu, Dongbing, Wang, Liguo, Hou, Yong, Zhu, Shida, Peng, Lihua, Zhang, Qin, Cheng, Yanbing, Su, Hong, Zhou, Xiuqing, Zhang, Jibin, Li, Fuqiang, Zheng, Hancheng, Zhao, Zhikun, Yin, Changjun, He, Zengquan, Gao, Xin, Zhau, Haiyen E, Chu, ChiaYi, Wu, Jason Boyang, Collins, Colin, Volik, Stanislav V, Bell, Robert, Huang, Jiaoti, Wu, Kui, Xu, Danfeng, Ye, Dingwei, Yu, Yongwei, Zhu, Lianhui, Qiao, Meng, Lee, HangMao, Yang, Yuehong, Zhu, Yasheng, Shi, Xiaolei, Chen, Rui, Wang, Yang, Xu, Weidong, Cheng, Yanqiong, Xu, Chuanliang, Gao, Xu, Zhou, Tie, Yang, Bo, Hou, Jianguo, Liu, Li, Zhang, Zhensheng, Zhu, Yao, Qin, Chao, Shao, Pengfei, Pang, Jun, Chung, Leland W K, Xu, Jianfeng, Wu, ChinLee, Zhong, Weide, Xu, Xun, Li, Yingrui, Zhang, Xiuqing, Wang, Jian, Yang, Huanming, Wang, Jun, Huang, Haojie, Sun, Yinghao. Whole-genome and Transcriptome Sequencing of Prostate Cancer Identify New Genetic Alterations Driving Disease Progression. EUROPEAN UROLOGY[J]. 2018, 73(3): 322-339, http://dx.doi.org/10.1016/j.eururo.2017.08.027.
[21] Zeng, Yi, Nie, Chao, Min, Junxia, Chen, Huashuai, Liu, Xiaomin, Ye, Rui, Chen, Zhihua, Bai, Chen, Xie, Enjun, Yin, Zhaoxue, Lv, Yuebin, Lu, Jiehua, Li, Jianxin, Ni, Ting, Bolund, Lars, Land, Kenneth C, Yashin, Anatoliy, ORand, Angela M, Sun, Liang, Yang, Ze, Tao, Wei, Gurinovich, Anastasia, Franceschi, Claudio, Xie, Jichun, Gu, Jun, Hou, Yong, Liu, Xiao, Xu, Xun, Robine, JeanMarie, Deelen, Ions, Sebastiani, Paola, Slagboom, Eline, Perls, Thomas, Hauser, Elizabeth, Gottschalk, William, Tan, Qihua, Christensen, Kaare, Shi, Xiaoming, Lutz, Mike, Tian, XiaoLi, Yang, Huanming, Vaupel, James. Sex Differences in Genetic Associations With Longevity. JAMA NETWORK OPEN[J]. 2018, 1(4): https://www.webofscience.com/wos/woscc/full-record/WOS:000452643200043.
[22] Huang, Xiaoyun, Liu, Shiping, Wu, Liang, Jiang, Miaomiao, Hou, Yong, Gu, J, Wang, X. High Throughput Single Cell RNA Sequencing, Bioinformatics Analysis and Applications. SINGLE CELL BIOMEDICINE[J]. 2018, 1068: 33-43, https://www.webofscience.com/wos/woscc/full-record/WOS:000453888200004.
[23] Ren, Weicheng, Ye, Xiaofei, Su, Hong, Li, Wei, Liu, Dongbing, Pirmoradian, Mohammad, Wang, Xianhuo, Zhang, Bo, Zhang, Qiang, Chen, Longyun, Nie, Man, Liu, Yao, Meng, Bin, Huang, Huiqiang, Jiang, Wenqi, Zeng, Yixin, Li, Wenyu, Wu, Kui, Hou, Yong, Wiman, Klas G, Li, Zhiming, Zhang, Huilai, Peng, Roujun, Zhu, Shida, PanHammarstrom, Qiang. Genetic landscape of hepatitis B virus-associated diffuse large B-cell lymphoma. BLOOD[J]. 2018, 131(24): 2670-2681, http://dx.doi.org/10.1182/blood-2017-11-817601.
[24] Timofeeva, Olga A, PalechorCeron, Nancy, Li, Guanglei, Yuan, Hang, Krawczyk, Ewa, Zhong, Xiaogang, Liu, Geng, Upadhyay, Geeta, Dakic, Aleksandra, Yu, Songtao, Fang, Shuang, Choudhury, Sujata, Zhang, Xueping, Ju, Andrew, Lee, MyeongSeon, Dan, Han C, Ji, Youngmi, Hou, Yong, Zheng, YunLing, Albanese, Chris, Rhim, Johng, Schlegel, Richard, Dritschilo, Anatoly, Liu, Xuefeng. Conditionally reprogrammed normal and primary tumor prostate epithelial cells: a novel patient-derived cell model for studies of human prostate cancer. ONCOTARGET[J]. 2017, 8(14): 22741-22758, https://www.webofscience.com/wos/woscc/full-record/WOS:000398211100039.
[25] Huang, Ao, Zhao, Xin, Yang, XinRong, Li, FuQiang, Zhou, XinLan, Wu, Kui, Zhang, Xin, Sun, QiMan, Cao, Ya, Zhu, HongMei, Wang, XiangDong, Yang, HuanMing, Wang, Jian, Tang, ZhaoYou, Hou, Yong, Fan, Jia, Zhou, Jian. Circumventing intratumoral heterogeneity to identify potential therapeutic targets in hepatocellular carcinoma. JOURNAL OF HEPATOLOGY[J]. 2017, 67(2): 293-301, http://dx.doi.org/10.1016/j.jhep.2017.03.005.
[26] Xiong, Heng, Liu, Dongbing, Li, Qiye, Lei, Mengyue, Xu, Liqin, Wu, Liang, Wang, Zongji, Ren, Shancheng, Li, Wangsheng, Xia, Min, Lu, Lihua, Lu, Haorong, Hou, Yong, Zhu, Shida, Liu, Xin, Sun, Yinghao, Wang, Jian, Yang, Huanming, Wu, Kui, Xu, Xun, Lee, Leo J. RED-ML: a novel, effective RNA editing detection method based on machine learning. GIGASCIENCE[J]. 2017, 6(5): 1-8, https://www.webofscience.com/wos/woscc/full-record/WOS:000403721200001.
[27] Zhuye Jie, Huihua Xia, ShiLong Zhong, Qiang Feng, Shenghui Li, Suisha Liang, Huanzi Zhong, Zhipeng Liu, Yuan Gao, Hui Zhao, Dongya Zhang, Zheng Su, Zhiwei Fang, Zhou Lan, Junhua Li, Liang Xiao, Jun Li, Ruijun Li, Xiaoping Li, Fei Li, Huahui Ren, Yan Huang, Yangqing Peng, Guanglei Li, Bo Wen, Bo Dong, JiYan Chen, QingShan Geng, ZhiWei Zhang, Huanming Yang, Jian Wang, Jun Wang, Xuan Zhang, Lise Madsen, Susanne Brix, Guang Ning, Xun Xu, Xin Liu, Yong Hou, Huijue Jia, Kunlun He, Karsten Kristiansen. The gut microbiome in atherosclerotic cardiovascular disease. NATURE COMMUNICATIONS[J]. 2017, 8(1): https://doaj.org/article/9a74ff24d53a4aff81bd45b859de6179.
[28] Li, Junji, Shi, Xulian, Qiao, Yi, Chen, Liang, Duan, Mengqin, Hou, Yong, Ge, Qinyu, Tao, Yuhan, Tu, Jing, Lu, Zuhong. 1D-Reactor Decentralized MDA for Uniform and Accurate Whole Genome Amplification. ANALYTICAL CHEMISTRY[J]. 2017, 89(19): 10147-10152, https://www.webofscience.com/wos/woscc/full-record/WOS:000412716800008.
[29] Yu, Qichao, Zhang, Wei, Zhang, Xiaolong, Zeng, Yongli, Wang, Yeming, Wang, Yanhui, Xu, Liqin, Huang, Xiaoyun, Li, Nannan, Zhou, Xinlan, Lu, Jie, Guo, Xiaosen, Li, Guibo, Hou, Yong, Liu, Shiping, Li, Bo. Population-wide sampling of retrotransposon insertion polymorphisms using deep sequencing and efficient detection. GIGASCIENCE[J]. 2017, 6(9): 1-11, http://www.corc.org.cn/handle/1471x/2185166.
[30] Liu, Geng, Li, Dongli, Li, Zhang, Qiu, Si, Li, Wenhui, Chao, Chengchi, Yang, Naibo, Li, Handong, Cheng, Zhen, Song, Xin, Cheng, Le, Zhang, Xiuqing, Wang, Jian, Yang, Huanming, Ma, Kun, Hou, Yong, Li, Bo. PSSMHCpan: a novel PSSM-based software for predicting class I peptide-HLA binding affinity. GIGASCIENCE[J]. 2017, 6(5): 1-11, https://www.webofscience.com/wos/woscc/full-record/WOS:000403723400001.
[31] Zhikun Zhao, Lynn Goldin, Shiping Liu, Liang Wu, Weiyin Zhou, Hong Lou, Qichao Yu, Shirley X Tsang, Miaomiao Jiang, Fuqiang Li, MaryLou McMaster, Yang Li, Xinxin Lin, Zhifeng Wang, Liqin Xu, Gerald Marti, Guibo Li, Kui Wu, Meredith Yeager, Huanming Yang, Xun Xu, Stephen J Chanock, Bo Li, Yong Hou, Neil Caporaso, Michael Dean. Evolution of multiple cell clones over a 29-year period of a CLL patient. NATURE COMMUNICATIONS[J]. 2016, 7(1): https://doaj.org/article/baef2f4116554396b7b5cc41c7e33bf1.
[32] Pei, Na, Zhang, Jiaosheng, Ma, Jinmin, Li, Liqiang, Li, Meng, Li, Jiandong, Sun, Yisuo, Ji, Jingkai, Jiang, Hui, Hou, Yong, Xu, Fengping, Lu, Haorong, Zhang, Ruimu, Wei, Xuemei, Xu, Xun, Deng, Jikui. First report of human salivirus/klassevirus in respiratory specimens of a child with fatal adenovirus infection. VIRUS GENES[J]. 2016, 52(5): 620-624, https://www.webofscience.com/wos/woscc/full-record/WOS:000382637500004.
[33] Wu, Song, Yang, Zhao, Ye, Rui, An, Dan, Li, Chong, Wang, Yitian, Wang, Yongqiang, Huang, Yi, Liu, Huan, Li, Feida, He, Luyun, Sun, Da, Yu, Yuan, Li, Qiaoling, Huang, Peide, Zhang, Meng, Zhao, Xin, Bi, Tengteng, Zhuang, Xuehan, Zhang, Liyan, Lu, Jingxiao, Sun, Xiaojuan, Zhou, Fangjian, Liu, Chunxiao, Yang, Guosheng, Hou, Yong, Fan, Zusen, Cai, Zhiming. Novel variants in MLL confer to bladder cancer recurrence identified by whole-exome sequencing. ONCOTARGET[J]. 2016, 7(3): 2629-2645, https://www.webofscience.com/wos/woscc/full-record/WOS:000369951800036.
[34] Qiu, Si, Li, Wenhui, Xiong, Heng, Liu, Dongbing, Bai, Yali, Wu, Kui, Zhang, Xiuqing, Yang, Huanming, Ma, Kun, Hou, Yong, Li, Bo. Single-cell RNA sequencing reveals dynamic changes in A-to-I RNA editome during early human embryogenesis. BMC GENOMICS[J]. 2016, 17(1): http://www.corc.org.cn/handle/1471x/2374279.
[35] Zhang, Xiaolong, Zhang, Meng, Hou, Yong, Xu, Liqin, Li, Weidong, Zou, Zhihui, Liu, Chunxiao, Xu, Abai, Wu, Song. Single-cell analyses of transcriptional heterogeneity in squamous cell carcinoma of urinary bladder. ONCOTARGET[J]. 2016, 7(40): 66069-66076, https://www.webofscience.com/wos/woscc/full-record/WOS:000387281000119.
[36] Georgiou, Konstantinos, Chen, Longyun, Berglund, Mattias, Ren, Weicheng, de Miranda, Noel F C C, Lisboa, Susana, Fangazio, Marco, Zhu, Shida, Hou, Yong, Wu, Kui, Fang, Wenfeng, Wang, Xianhuo, Meng, Bin, Zhang, Li, Zeng, Yixin, Bhagat, Govind, Nordenskjold, Magnus, Sundstrom, Christer, Enblad, Gunilla, DallaFavera, Riccardo, Zhang, Huilai, Teixeira, Manuel R, Pasqualucci, Laura, Peng, Roujun, PanHammarstrom, Qiang. Genetic basis of PD-L1 overexpression in diffuse large B-cell lymphomas. BLOOD[J]. 2016, 127(24): 3026-3034, http://dx.doi.org/10.1182/blood-2015-12-686550.
[37] Han, Binyue, Yuan, Hui, Wang, Tao, Li, Bo, Ma, Li, Yu, Shuyang, Huang, Tian, Li, Yan, Fang, Dongming, Chen, Xiaoli, Wang, Yongsi, Qiu, Si, Guo, Ying, Fei, Jing, Ren, Liming, PanHammarstrom, Qiang, Hammarstrom, Lennart, Wang, Jun, Wang, Jian, Hou, Yong, Pan, Qingjie, Xu, Xun, Zhao, Yaofeng. Multiple IgH Isotypes Including IgD, Subclasses of IgM, and IgY Are Expressed in the Common Ancestors of Modern Birds. JOURNAL OF IMMUNOLOGY[J]. 2016, 196(12): 5138-5147, http://www.corc.org.cn/handle/1471x/2048608.
[38] Wang, Yongqiang, Yu, Yuan, Ye, Rui, Zhang, Duo, Li, Qiaoling, An, Dan, Fang, Lu, Lin, Youcheng, Hou, Yong, Xu, Abai, Fu, Yu, Lu, Wei, Chen, Xin, Chen, Mingwei, Zhang, Meng, Jiang, Huiling, Zhang, Chuanxia, Dong, Pei, Li, Chong, Chen, Jun, Yang, Guosheng, Liu, Chunxiao, Cai, Zhiming, Zhou, Fangjian, Wu, Song. An epigenetic biomarker combination of PCDH17 and POU4F2 detects bladder cancer accurately by methylation analyses of urine sediment DNA in Han Chinese. ONCOTARGET[J]. 2016, 7(3): 2754-2764, https://www.webofscience.com/wos/woscc/full-record/WOS:000369951800045.
[39] Hansen, Stine Ninel, Ehlers, Natasja Spring, Zhu, Shida, Thomsen, Mathilde Borg Houlberg, Nielsen, Rikke Linnemann, Liu, Dongbing, Wang, Guangbiao, Hou, Yong, Zhang, Xiuqing, Xu, Xun, Bolund, Lars, Yang, Huanming, Wang, Jun, Moreira, Jose, Ditzel, Henrik J, Brunner, Nils, Schrohl, AnneSofie, Stenvang, Jan, Gupta, Ramneek. The stepwise evolution of the exome during acquisition of docetaxel resistance in breast cancer cells. BMC GENOMICS[J]. 2016, 17(1): http://dx.doi.org/10.1186/s12864-016-2749-4.
[40] Wu, Kui, Zhang, Xin, Li, Fuqiang, Xiao, Dakai, Hou, Yong, Zhu, Shida, Liu, Dongbing, Ye, Xiaofei, Ye, Mingzhi, Yang, Jie, Shao, Libin, Pan, Hui, Lu, Na, Yu, Yuan, Liu, Liping, Li, Jin, Huang, Liyan, Tang, Hailing, Deng, Qiuhua, Zheng, Yue, Peng, Lihua, Liu, Geng, Gu, Xia, He, Ping, Gu, Yingying, Lin, Weixuan, He, Huiming, Xie, Guoyun, Liang, Han, An, Na, Wang, Hui, Teixeira, Manuel, Vieira, Joana, Liang, Wenhua, Zhao, Xin, Peng, Zhiyu, Mu, Feng, Zhang, Xiuqing, Xu, Xun, Yang, Huanming, Kristiansen, Karsten, Wang, Jian, Zhong, Nanshan, Wang, Jun, PanHammarstrom, Qiang, He, Jianxing. Frequent alterations in cytoskeleton remodelling genes in primary and metastatic lung adenocarcinomas. NATURE COMMUNICATIONS[J]. 2015, 6: https://www.webofscience.com/wos/woscc/full-record/WOS:000367570600002.
[41] Wu, Liang, Zhang, Xiaolong, Zhao, Zhikun, Wang, Ling, Li, Bo, Li, Guibo, Dean, Michael, Yu, Qichao, Wang, Yanhui, Lin, Xinxin, Rao, Weijian, Mei, Zhanlong, Li, Yang, Jiang, Runze, Yang, Huan, Li, Fuqiang, Xie, Guoyun, Xu, Liqin, Wu, Kui, Zhang, Jie, Chen, Jianghao, Wang, Ting, Kristiansen, Karsten, Zhang, Xiuqing, Li, Yingrui, Yang, Huanming, Wang, Jian, Hou, Yong, Xu, Xun. Full-length single-cell RNA-seq applied to a viral human cancer: applications to HPV expression and splicing analysis in HeLa S3 cells. GIGASCIENCE[J]. 2015, 4(1): http://www.corc.org.cn/handle/1471x/2374348.
[42] Xu, Xun, Hou, Yong, Yin, Xuyang, Bao, Li, Tang, Aifa, Song, Luting, Li, Fuqiang, Tsang, Shirley, Wu, Kui, Wu, Hanjie, He, Weiming, Zeng, Liang, Xing, Manjie, Wu, Renhua, Jiang, Hui, Liu, Xiao, Cao, Dandan, Guo, Guangwu, Hu, Xueda, Gui, Yaoting, Li, Zesong, Xie, Wenyue, Sun, Xiaojuan, Shi, Min, Cai, Zhiming, Wang, Bin, Zhong, Meiming, Li, Jingxiang, Lu, Zuhong, Gu, Ning, Zhang, Xiuqing, Goodman, Laurie, Bolund, Lars, Wang, Jian, Yang, Huanming, Kristiansen, Karsten, Dean, Michael, Li, Yingrui, Wang, Jun. Single-Cell Exome Sequencing Reveals Single-Nucleotide Mutation Characteristics of a Kidney Tumor. CELL[J]. 2012, 148(5): 886-895, http://dx.doi.org/10.1016/j.cell.2012.02.025.
[43] Hou, Yong, Song, Luting, Zhu, Ping, Zhang, Bo, Tao, Ye, Xu, Xun, Li, Fuqiang, Wu, Kui, Liang, Jie, Shao, Di, Wu, Hanjie, Ye, Xiaofei, Ye, Chen, Wu, Renhua, Jian, Min, Chen, Yan, Xie, Wei, Zhang, Ruren, Chen, Lei, Liu, Xin, Yao, Xiaotian, Zheng, Hancheng, Yu, Chang, Li, Qibin, Gong, Zhuolin, Mao, Mao, Yang, Xu, Yang, Lin, Li, Jingxiang, Wang, Wen, Lu, Zuhong, Gu, Ning, Laurie, Goodman, Bolund, Lars, Kristiansen, Karsten, Wang, Jian, Yang, Huanming, Li, Yingrui, Zhang, Xiuqing, Wang, Jun. Single-Cell Exome Sequencing and Monoclonal Evolution of a JAK2-Negative Myeloproliferative Neoplasm. CELL[J]. 2012, 148(5): 873-885, http://dx.doi.org/10.1016/j.cell.2012.02.028.
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