同步辐射实验控制与数据采集软件开发

多维度衍射/散射成像方法学研究

分级生物材料结构与力学性能研究

   

070205-凝聚态物理

同步辐射成像与衍射方法学；算法与软件开发
同步辐射实验控制与数据采集软件
6D WAXD

2011-11--2016-09   英国玛丽女王大学   博士
2009-09--2012-03   华东理工大学   硕士
2005-09--2009-06   华东理工大学   本科

   

2018-04~现在, 中国科学院高能物理研究所, 特聘青年研究员
2016-03~2018-03,德国DESY同步辐射中心P06线站, 博士后

2021-10-30-今,中国光生物物理学会, 秘书长

Synchrotron Radiation for Materials Science Applications

   

（ 1 ） 一种面向科学大数据HDF5单个文件的高性能读写方法, 发明专利, 2022, 第 2 作者, 专利号: CN114995754A

（ 2 ） 光阑及光学装置, 发明专利, 2021, 第 5 作者, 专利号: CN113376190A

（ 3 ） 一种加压测试装置, 发明专利, 2021, 第 1 作者, 专利号: CN213275145U

（ 4 ） 一种原位机械性能测试装置及测试方法, 发明专利, 2020, 第 1 作者, 专利号: CN112113844A

   

[1] Zhen Zhang, Chun Li, Wenhui Wang, Zheng Dong, Gongfa Liu, Yuhui Dong, Yi Zhang. Towards full-stack deep learning-empowered data processing pipeline for synchrotron tomography experiments. THE INNOVATION[J]. 2024, 5(1): http://dx.doi.org/10.1016/j.xinn.2023.100539.
[2] Minghui Sun, Zheng Dong, Liyuan Wu, Haodong Yao, Wenchao Niu, Deting Xu, Ping Chen, Himadri Shikhar Gupta, Yi Zhang, Yuhui Dong, Chunying Chen, Lina Zhao. Fast extraction of three-dimensional nanofiber orientation from WAXD patterns using machine learning. IUCrJ[J]. 2023, 10(3): https://journals.iucr.org/m/issues/2023/03/00/ro5032/.
[3] Pengcheng Li, Chenglong Zhang, Zhongyang Yue, Xiaobao Deng, Chun Li, Aiyu Zhou, Gang Li, Yu Liu, Yi Zhang. Progress and Outlook on Advanced Fly Scans Based on Mamba. Synchrotron Radiation News[J]. 2023, 36(8): 1-7, [4] Xiang Li, Yi Zhang, Yu Liu, Pengcheng Li, Hao Hu, Liwen Wang, Ping He, Yuhui Dong, Chenglong Zhang, V FavreNicolin. A high-throughput big-data orchestration and processing system for the High Energy Photon Source. JOURNAL OF SYNCHROTRON RADIATION[J]. 2023, 30(Pt 6): 1086-1091, https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10624036/.
[5] Zhongzheng Zhou, Chun Li, Xiaoxue Bi, Chenglong Zhang, Yingke Huang, Jian Zhuang, Wenqiang Hua, Zheng Dong, Lina Zhao, Yi Zhang, Yuhui Dong. A machine learning model for textured X-ray scattering and diffraction image denoising. npj Computational Materials[J]. 2023, https://www.nature.com/articles/s41524-023-01011-w.
[6] Zhen Zhang, Xiaoxue Bi, Pengcheng Li, Chenglong Zhang, Yiming Yang, Yu Liu, Gang Chen, Yuhui Dong, Gongfa Liu, Yi Zhang. Automatic synchrotron tomographic alignment schemes based on genetic algorithms and human-in-the-loop software. Journal of Synchrotron Radiation[J]. 2023, 30(1): 169-178, https://journals.iucr.org/s/issues/2023/01/00/tv5039/index.html.
[7] 李鹏程, 张承龙, 张玉俊, 李纯, 郭志英, 雷革, 张一, 周爱玉, 毕筱雪, 刘玙. PandA(Box) flies on Bluesky: maintainable and user-friendly fly scans with Mamba at HEPS. 辐射探测技术与方法（英文）[J]. 2023, https://link.springer.com/article/10.1007/s41605-023-00416-x.
[8] Chun Li, ChengLong Zhang, Yu Liu, Yi Zhang, Xiaoxue Bi. Software and algorithms for high-throughput multimodal experiments at advanced synchrotron light sources. Conference on Infrared, Millimeter, Terahertz Waves and Applications (IMT2022)[J]. 2023, https://doi.org/10.1117/12.2663017.
[9] Xinyu Pan, Shuo Wang, Zhongzheng Zhou, Liang Zhou, Peng Liu, Chun Li, Wenhui Wang, Chenglong Zhang, Yuhui Dong, Yi Zhang. An efficient ptychography reconstruction strategy through fine-tuning of large pre-trained deep learning model. ISCIENCE[J]. 2023, 26(12): 108420-, http://dx.doi.org/10.1016/j.isci.2023.108420.
[10] Zhen Zhang, Zheng Dong, Hanfei Yan, Ajith Pattammattel, Xiaoxue Bi, Yuhui Dong, Gongfa Liu, Xiaokang Sun, Yi Zhang. A general image misalignment correction method for tomography experiments. ISCIENCE[J]. 2023, 26(10): http://dx.doi.org/10.1016/j.isci.2023.107932.
[11] 齐法制, 李刚, 李纯, 汪璐, 张一, 张正德, 陈刚, 罗武鸣, 赵丽娜, 胡誉, 袁野. 基于人工智能的高能物理大数据技术与应用. 数据与计算发展前沿[J]. 2023, 5(2): 50-59, http://lib.cqvip.com/Qikan/Article/Detail?id=7109434376.
[12] 潘新宇, 毕筱雪, 董政, 耿直, 徐晗, 张一, 董宇辉, 张承龙. 叠层相干衍射成像算法发展综述. 物理学报[J]. 2023, 72(5): 102-122, https://wulixb.iphy.ac.cn/en/article/doi/10.7498/aps.72.20221889.
[13] Dong, Zheng, Chen, Chen, Wen, Kaihua, Zhao, Xiaoyi, Guo, Xihong, Zhou, Zhongzheng, Chang, Guangcai, Zhang, Yi, Dong, Yuhui. A Freestanding Chitin-Derived Hierarchical Nanocomposite for Developing Electrodes in Future Supercapacitor Industry. POLYMERS[J]. 2022, 14(1): http://dx.doi.org/10.3390/polym14010195.
[14] Dong, Yuhui, Li, Chun, Zhang, Yi, Li, Pengcheng, Qi, Fazhi. Exascale image processing for next-generation beamlines in advanced light sources. NATURE REVIEWS PHYSICS[J]. 2022, https://www.nature.com/articles/s42254-022-00465-z.
[15] Dong, Zheng, Chen, Sen, Gupta, Himadri S, Zhao, Xiaoyi, Yang, Yiming, Chang, Guangcai, Xue, Jian, Zhang, Yiyang, Luo, Shengnian, Dong, Yuhui, Zhang, Yi. In situ determination of the extreme damage resistance behavior in stomatopod dactyl club. JOURNAL OF SYNCHROTRON RADIATION[J]. 2022, 29(Pt 3): 775-786, https://www.doi.org/10.1107/S1600577522001217.
[16] Liu, Yu, Geng, YanDa, Bi, XiaoXue, Li, Xiang, Tao, Ye, Cao, JianShe, Dong, YuHui, Zhang, Yi. Mamba: a systematic software solution for beamline experiments at HEPS. JOURNAL OF SYNCHROTRON RADIATION[J]. 2022, 29(Pt 3): 664-669, http://dx.doi.org/10.1107/S1600577522002697.
[17] Xi, Li, Zhang, Yi, Gupta, Himadri, Terrill, Nick, Wang, Pan, Zhao, Tian, Fang, Daining. A multiscale study of structural and compositional changes in a natural nanocomposite: Osteoporotic bone with chronic endogenous steroid excess. BONE[J]. 2021, 143: http://dx.doi.org/10.1016/j.bone.2020.115666.
[18] Hu, Yu, Li, Ling, Tian, Haolai, Liu, Zhibing, Huang, Qiulan, Zhang, Yi, Hu, Hao, Qi, Fazhi. Daisy: Data analysis integrated software system for X-ray experiments. EPJ WEB OF CONFERENCES[J]. 2021, 251: http://arxiv.org/abs/2103.00786.
[19] Sprenger, Paul, Stehle, Matthias, Gaur, Abhijeet, Weiss, Jana, Brueckner, Dennis, Zhang, Yi, Garrevoet, Jan, Suuronen, JussiPetteri, Thomann, Michael, Fischer, Achim, Grunwaldt, JanDierk, Sheppard, Thomas L. Chemical Imaging of Mixed Metal Oxide Catalysts for Propylene Oxidation: From Model Binary Systems to Complex Multicomponent Systems. CHEMCATCHEM[J]. 2021, 13(10): 2483-2493, http://dx.doi.org/10.1002/cctc.202100054.
[20] Zhang, Yi, Garrevoet, Jan, Wang, Yanhong, Roeh, Jan Torben, Terrill, Nicholas J, Falkenberg, Gerald, Dong, Yuhui, Gupta, Himadri S. Molecular to Macroscale Energy Absorption Mechanisms in Biological Body Armour Illuminated by Scanning X-ray Diffraction with In Situ Compression. ACS NANO[J]. 2020, 14(12): 16535-16546, http://dx.doi.org/10.1021/acsnano.0c02879.
[21] Wang, Yanhong, Zhang, Yi, Terrill, Nicholas J, Barbieri, Ettore, Pugno, Nicola M, Gupta, Himadri S. Matrix-induced pre-strain and mineralization-dependent interfibrillar shear transfer enable 3D fibrillar deformation in a biogenic armour. ACTA BIOMATERIALIA[J]. 2019, 100: 18-28, http://dx.doi.org/10.1016/j.actbio.2019.09.036.
[22] Dean, Christopher, Le Cabec, Adeline, Spiers, Kathryn, Zhang, Yi, Garrevoet, Jan, 张一. Incremental distribution of strontium and zinc in great ape and fossil hominin cementum using synchrotron X-ray fluorescence mapping. JOURNAL OF THE ROYAL SOCIETY INTERFACE[J]. 2018, 15(138): https://www.webofscience.com/wos/woscc/full-record/WOS:000423770900006.
[23] Zhang, Y, De Falco, P, Wang, Y, Barbieri, E, Paris, O, Terrill, N J, Falkenberg, G, Pugno, N M, Gupta, H S, 张一. Towards in situ determination of 3D strain and reorientation in the interpenetrating nanofibre networks of cuticle. NANOSCALE[J]. 2017, 9(31): 11249-11260, https://www.webofscience.com/wos/woscc/full-record/WOS:000407336600031.
[24] Zhang, Y, Paris, O, Terrill, N J, Gupta, H S. Uncovering three-dimensional gradients in fibrillar orientation in an impact-resistant biological armour. SCIENTIFIC REPORTS[J]. 2016, 6: https://www.nature.com/articles/srep26249.
[25] Min Chen, Yi Zhang, Yan Zhou, Yan Zhang, Meidong Lang, Zhaoyang Ye, Wen-Song Tan. Pendant small functional groups on poly(ϵ-caprolactone) substrate modulate adhesion, proliferation and differentiation of human mesenchymal stem cells. COLLOIDS AND SURFACES B: BIOINTERFACES. 2015, 134: 322-331, http://dx.doi.org/10.1016/j.colsurfb.2015.07.018.
[26] Yan Zhang, Yi Zhang, Min Chen, Yan Zhou, Meidong Lang. Galactosylated poly(ε-caprolactone) membrane promoted liver-specific functions of HepG2 cells in vitro. MATERIALS SCIENCE & ENGINEERING C. 2014, 41: 52-58, http://dx.doi.org/10.1016/j.msec.2014.03.059.
[27] Zhang, Yi, Zhang, Yan, Chen, Min, Yan, Jinliang, Ye, Zhaoyang, Zhou, Yan, Tan, Wensong, Lang, Meidong. Surface properties of amino-functionalized poly(epsilon-caprolactone) membranes and the improvement of human mesenchymal stem cell behavior. JOURNAL OF COLLOID AND INTERFACE SCIENCE[J]. 2012, 368: 64-69, https://www.webofscience.com/wos/woscc/full-record/WOS:000299490500009.

   

（ 1 ） 率先行动“****”C类, 负责人, 中国科学院计划, 2019-01--2020-12
（ 2 ） 生物大分子复合体结果与功能的跨尺度研究, 参与, 中国科学院计划, 2020-01--2024-12
（ 3 ） 基于同步辐射微束X射线衍射实验研究高抗冲击性螳螂虾外骨骼多尺度形变机制, 负责人, 国家任务, 2021-01--2023-12
（ 4 ） 高能同步辐射光源, 参与, 国家任务, 2019-06--2025-12
（ 5 ） 基于人工智能的高能物理大数据技术研究与示范, 负责人, 中国科学院计划, 2022-12--2024-07
（ 6 ） 基于虚拟束线技术的同步辐射自动化与智能化软件系统研究, 负责人, 研究所自主部署, 2022-01--2024-12
（ 7 ） 面向先进同步辐射光源的全流程自动化与智能化实验软件系统, 负责人, 国家任务, 2023-12--2028-11

（1）新一代“科学软件系统”与“物理大脑”推动的智能光源   中国科学院第二届雁栖青年论坛   2023-11-02

现指导学生

李想  博士研究生  082703-核技术及应用  

汪祖登  博士研究生  070205-凝聚态物理