基本信息

贺思敏  男  博导  中国科学院计算技术研究所
电子邮件: smhe@ict.ac.cn
个人主页: http://pfind.org/people/smhe/Chinese/default.htm 

招生信息

   
招生专业
081203-计算机应用技术
招生方向
搜索引擎,应用算法学,生物信息学

教育背景

1991-09--1997-07   清华大学计算机科学与技术系   博士
1986-09--1991-07   清华大学计算机科学与技术系   学士
学历
清华大学 19910901--19970701 研究生毕业
学位
清华大学 19910901--19970701 工学博士学位

专利与奖励

   
奖励信息
(1) 中国计算机学会技术发明奖《蛋白质组海量质谱数据深度解析关键技术及应用》, 一等奖, 其他, 2019
(2) 中国科学院优秀导师奖, 院级, 2013
(3) 中创软件人才奖, 其他, 2009
(4) 数字视频广播编码传输与接收系统, 二等奖, 国家级, 2000

出版信息

   
发表论文
[1] Zhou, WenJing, Wei, ZhuoHong, He, SiMin, Chi, Hao. pValid 2: A deep learning based validation method for peptide identification in shotgun proteomics with increased discriminating power. JOURNAL OF PROTEOMICS[J]. 2022, 251: http://dx.doi.org/10.1016/j.jprot.2021.104414.
[2] Zeng, WenFeng, Cao, WeiQian, Liu, MingQi, He, SiMin, Yang, PengYuan. Precise, fast and comprehensive analysis of intact glycopeptides and modified glycans with pGlyco3. NATURE METHODS[J]. 2021, 18(12): 1515-+, http://dx.doi.org/10.1038/s41592-021-01306-0.
[3] Chen, ZhenLin, Mao, PengZhi, Zeng, WenFeng, Chi, Hao, He, SiMin. pDeepXL: MS/MS Spectrum Prediction for Cross-Linked Peptide Pairs by Deep Learning. JOURNAL OF PROTEOME RESEARCH[J]. 2021, 20(5): 2570-2582, http://dx.doi.org/10.1021/acs.jproteome.0c01004.
[4] Hao Yang, YanChang Li, MingZhi Zhao, FeiLin Wu, Xi Wang, WeiDi Xiao, YiHao Wang, JunLing Zhang, FuQiang Wang, Feng Xu, WenFeng Zeng, Christopher M Overall, SiMin He, Hao Chi, Ping Xu. Precision De Novo Peptide Sequencing Using Mirror Proteases of Ac-LysargiNase and Trypsin for Large-scale Proteomics *. Molecular & Cellular Proteomics : MCP[J]. 2019, 18(4): 773-785, http://dx.doi.org/10.1074/mcp.TIR118.000918.
[5] ZhenLin Chen, JiaMing Meng, Yong Cao, JiLi Yin, RunQian Fang, ShengBo Fan, Chao Liu, WenFeng Zeng, YueHe Ding, Dan Tan, Long Wu, WenJing Zhou, Hao Chi, RuiXiang Sun, MengQiu Dong, SiMin He. A high-speed search engine pLink 2 with systematic evaluation for proteome-scale identification of cross-linked peptides. Nature Communications[J]. 2019, 10(1): 1-12, http://dx.doi.org/10.1038/s41467-019-11337-z.
[6] Zeng, WenFeng, Zhou, XieXuan, Zhou, WenJing, Chi, Hao, Zhan, Jianfeng, He, SiMin. MS/MS Spectrum Prediction for Modified Peptides Using pDeep2 Trained by Transfer Learning. ANALYTICAL CHEMISTRY[J]. 2019, 91(15): 9724-9731, [7] Zuo, MeiQing, Sun, RuiXiang, Fang, RunQian, He, SiMin, Dong, MengQiu. Characterization of collision-induced dissociation of deprotonated peptides of 4-16 amino acids using high-resolution mass spectrometry. INTERNATIONAL JOURNAL OF MASS SPECTROMETRY[J]. 2019, 445: http://dx.doi.org/10.1016/j.ijms.2019.116186.
[8] Alexander X Jones, Yong Cao, YuLiang Tang, JianHua Wang, YueHe Ding, Hui Tan, ZhenLin Chen, RunQian Fang, Jili Yin, RongChang Chen, Xing Zhu, Yang She, Niu Huang, Feng Shao, Keqiong Ye, RuiXiang Sun, SiMin He, Xiaoguang Lei, MengQiu Dong. Improving mass spectrometry analysis of protein structures with arginine-selective chemical cross-linkers. Nature Communications[J]. 2019, 10(1): 1-11, http://dx.doi.org/10.1038/s41467-019-11917-z.
[9] Zhou, WenJing, Yang, Hao, Zeng, WenFeng, Zhang, Kun, Chi, Hao, He, SiMin. pValid: Validation Beyond the Target-Decoy Approach for Peptide Identification in Shotgun Proteomics. JOURNAL OF PROTEOME RESEARCH[J]. 2019, 18(7): 2747-2758, [10] Yang, Hao, Chi, Hao, Zeng, WenFeng, Zhou, WenJing, He, SiMin. pNovo 3: precise de novo peptide sequencing using a learning-to-rank framework. BIOINFORMATICS[J]. 2019, 35(14): I183-I190, [11] Yang, Hao, Li, YanChang, Zhao, MingZhi, Wu, FeiLin, Wang, Xi, Xiao, WeiDi, Wang, YiHao, Zhang, JunLing, Wang, FuQiang, Xu, Feng, Zengt, WenFeng, Overall, Christopher M, He, SiMin, Chi, Hao, Xu, Ping. Precision De Novo Peptide Sequencing Using Mirror Proteases of Ac-LysargiNase and Trypsin for Large-scale Proteomics. MOLECULAR & CELLULAR PROTEOMICS[J]. 2019, 18(4): 773-785, http://dx.doi.org/10.1074/mcp.TIR118.000918.
[12] Lu Shan, Cao Yong, Fan Shengbo, Chen Zhenlin, Fang Runqian, He Simin, Dong Mengqiu. Mapping disulfide bonds from sub-micrograms of purified proteins or micrograms of complex protein mixtures. 生物物理学报:英文版[J]. 2018, 4(2): 68-81, http://lib.cqvip.com/Qikan/Article/Detail?id=675314443.
[13] Chi, Hao, Liu, Chao, Yang, Hao, Zeng, WenFeng, Wu, Long, Zhou, WenJing, Wang, RuiMin, Niu, XiuNan, Ding, YueHe, Zhang, Yao, Wang, ZhaoWei, Chen, ZhenLin, Sun, RuiXiang, Liu, Tao, Tan, GuangMing, Dong, MengQiu, Xu, Ping, Zhang, PeiHeng, He, SiMin. Comprehensive identification of peptides in tandem mass spectra using an efficient open search engine. NATURE BIOTECHNOLOGY[J]. 2018, 36(11): 1059-+, https://www.webofscience.com/wos/woscc/full-record/WOS:000450374000018.
[14] Yang, Hao, Chi, Hao, Zhou, WenJing, Zeng, WenFeng, Liu, Chao, Wang, RuiMin, Wang, ZhaoWei, Niu, XiuNan, Chen, ZhenLin, He, SiMin. pSite: Amino Acid Confidence Evaluation for Quality Control of De Novo Peptide Sequencing and Modification Site Localization. JOURNAL OF PROTEOME RESEARCH[J]. 2018, 17(1): 119-128, https://www.webofscience.com/wos/woscc/full-record/WOS:000419749800012.
[15] Ding, YueHe, Gong, Zhou, Dong, Xu, Liu, Kan, Liu, Zhu, Liu, Chao, He, SiMin, Dong, MengQiu, Tang, Chun. Modeling Protein Excited-state Structures from "Over-length" Chemical Cross-links. JOURNAL OF BIOLOGICAL CHEMISTRY[J]. 2017, 292(4): 1187-1196, http://dx.doi.org/10.1074/jbc.M116.761841.
[16] Zhou, XieXuan, Zeng, WenFeng, Chi, Hao, Luo, Chunjie, Liu, Chao, Zhan, Jianfeng, He, SiMin, Zhang, Zhifei. pDeep: Predicting MS/MS Spectra of Peptides with Deep Learning. ANALYTICAL CHEMISTRY[J]. 2017, 89(23): 12690-12697, https://www.webofscience.com/wos/woscc/full-record/WOS:000417549600014.
[17] MingQi Liu, WenFeng Zeng, Pan Fang, WeiQian Cao, Chao Liu, GuoQuan Yan, Yang Zhang, Chao Peng, JianQiang Wu, XiaoJin Zhang, HuiJun Tu, Hao Chi, RuiXiang Sun, Yong Cao, MengQiu Dong, BiYun Jiang, JiangMing Huang, HuaLi Shen, Catherine C L Wong, SiMin He, PengYuan Yang. pGlyco 2.0 enables precision N-glycoproteomics with comprehensive quality control and one-step mass spectrometry for intact glycopeptide identification. NATURE COMMUNICATIONS[J]. 2017, 8(1): https://doaj.org/article/06238f004d55472fb185f1b06f0ba1c5.
[18] Yang, Hao, Chi, Hao, Zhou, WenJing, Zeng, WenFeng, He, Kun, Liu, Chao, Sun, RuiXiang, He, SiMin. Open-pNovo: De Novo Peptide Sequencing with Thousands of Protein Modifications. JOURNAL OF PROTEOME RESEARCH[J]. 2017, 16(2): 645-654, https://www.webofscience.com/wos/woscc/full-record/WOS:000393539600026.
[19] Tan, Dan, Li, Qiang, Zhang, MeiJun, Liu, Chao, Ma, Chengying, Zhang, Pan, Ding, YueHe, Fan, ShengBo, Tao, Li, Yang, Bing, Li, Xiangke, Ma, Shoucai, Liu, Junjie, Feng, Boya, Liu, Xiaohui, Wang, HongWei, He, SiMin, Gao, Ning, Ye, Keqiong, Dong, MengQiu, Lei, Xiaoguang. Trifunctional cross-linker for mapping protein-protein interaction networks and comparing protein conformational states. ELIFE[J]. 2016, 5: https://doaj.org/article/d1b4dc53824b43dfb9c0301bb08e8ae7.
[20] Zeng, WenFeng, Liu, MingQi, Zhang, Yang, Wu, JianQiang, Fang, Pan, Peng, Chao, Nie, Aiying, Yan, Guoquan, Cao, Weiqian, Liu, Chao, Chi, Hao, Sun, RuiXiang, Wong, Catherine C L, He, SiMin, Yang, Pengyuan. pGlyco: a pipeline for the identification of intact N-glycopeptides by using HCD-and CID-MS/MS and MS3. SCIENTIFIC REPORTS[J]. 2016, 6: https://www.webofscience.com/wos/woscc/full-record/WOS:000375290500001.
[21] Ding, YueHe, Fan, ShengBo, Li, Shuang, Feng, BoYa, Gao, Ning, Ye, Keqiong, He, SiMin, Dong, MengQiu. Increasing the Depth of Mass-Spectrometry-Based Structural Analysis of Protein Complexes through the Use of Multiple Cross-Linkers. ANALYTICAL CHEMISTRY[J]. 2016, 88(8): 4461-4469, https://www.webofscience.com/wos/woscc/full-record/WOS:000374706000041.
[22] Sun, RuiXiang, Luo, Lan, Wu, Long, Wang, RuiMin, Zeng, WenFeng, Chi, Hao, Liu, Chao, He, SiMin. pTop 1.0: A High-Accuracy and High-Efficiency Search Engine for Intact Protein Identification. ANALYTICAL CHEMISTRY[J]. 2016, 88(6): 3082-3090, https://www.webofscience.com/wos/woscc/full-record/WOS:000372391500016.
[23] Zeng WenFeng, Zhang Yang, Liu MingQi, Wu JianQiang, Zhang XiaoJin, Yang Hao, Liu Chao, Chi Hao, Zhang Kun, Sun RuiXiang, Yang PengYuan, He SiMin. Trends in Mass Spectrometry-Based Large-scale N-Glycopeptides Analysis. PROGRESS IN BIOCHEMISTRY AND BIOPHYSICS[J]. 2016, 43(6): 550-562, https://www.webofscience.com/wos/woscc/full-record/WOS:000378458700002.
[24] Gao, Zhiqi, Wang, Zhiqiang, Zhang, Kun, Li, Yanchang, Zhang, Tao, Wang, Dongshu, Liu, Xiankai, Feng, Erling, Chang, Lei, Xu, Junjie, He, Simin, Xu, Ping, Zhu, Li, Wang, Hengliang. Experimental Validation of Bacillus anthracis A16R Proteogenomics. SCIENTIFIC REPORTS[J]. 2015, 5: https://www.webofscience.com/wos/woscc/full-record/WOS:000362082600001.
[25] Chi, Hao, He, Kun, Yang, Bing, Chen, Zhen, Sun, RuiXiang, Fan, ShengBo, Zhang, Kun, Liu, Chao, Yuan, ZuoFei, Wang, QuanHui, Liu, SiQi, Dong, MengQiu, He, SiMin. pFind-Alioth: A novel unrestricted database search algorithm to improve the interpretation of high-resolution MS/MS data (Reprinted from vol 125, pg 89-97, 2015). JOURNAL OF PROTEOMICS[J]. 2015, 129: 33-41, https://www.webofscience.com/wos/woscc/full-record/WOS:000364887600005.
[26] Zhang, Kun, Fu, Yan, Zeng, WenFeng, He, Kun, Chi, Hao, Liu, Chao, Li, YanChang, Gao, Yuan, Xu, Ping, He, SiMin. A note on the false discovery rate of novel peptides in proteogenomics. BIOINFORMATICS[J]. 2015, 31(20): 3249-3253, https://www.webofscience.com/wos/woscc/full-record/WOS:000362846600002.
[27] Chi, Hao, He, Kun, Yang, Bing, Chen, Zhen, Sun, RuiXiang, Fan, ShengBo, Zhang, Kun, Liu, Chao, Yuan, ZuoFei, Wang, QuanHui, Liu, SiQi, Dong, MengQiu, He, SiMin. pFind-Alioth: A novel unrestricted database search algorithm to improve the interpretation of high-resolution MS/MS data. JOURNAL OF PROTEOMICS[J]. 2015, 125: 89-97, http://dx.doi.org/10.1016/j.jprot.2015.05.009.
[28] Lu, Shan, Fan, ShengBo, Yang, Bing, Li, YuXin, Meng, JiaMing, Wu, Long, Li, Pin, Zhang, Kun, Zhang, MeiJun, Fu, Yan, Luo, Jincai, Sun, RuiXiang, He, SiMin, Dong, MengQiu. Mapping native disulfide bonds at a proteome scale. NATURE METHODS[J]. 2015, 12(4): 329-U73, http://dx.doi.org/10.1038/NMETH.3283.
[29] Liu, Chao, Song, ChunQing, Yuan, ZuoFei, Fu, Yan, Chi, Hao, Wang, LeHeng, Fan, ShengBo, Zhang, Kun, Zeng, WenFeng, He, SiMin, Dong, MengQiu, Sun, RuiXiang. pQuant Improves Quantitation by Keeping out Interfering Signals and Evaluating the Accuracy of Calculated Ratios. ANALYTICAL CHEMISTRY[J]. 2014, 86(11): 5286-5294, https://www.webofscience.com/wos/woscc/full-record/WOS:000336953100015.
[30] Fan ShengBo, Wu YanJie, Yang Bing, Chi Hao, Meng JiaMing, Lu Shan, Zhang Kun, Wu Long, Sun RuiXiang, Dong MengQiu, He SiMin. A New Approach to Protein Structure and Interaction Research: Chemical Cross-linking in Combination With Mass Spectrometry. PROGRESS IN BIOCHEMISTRY AND BIOPHYSICS[J]. 2014, 41(11): 1109-1125, https://www.webofscience.com/wos/woscc/full-record/WOS:000345267500003.
[31] Zhang Kun, Wang LeHeng, Chi Hao, Bu DeChao, Yuan ZuoFei, Liu Chao, Fan ShengBo, Chen HaiFeng, Zeng WenFeng, Luo HaiTao, Sun RuiXiang, He SiMin, Xie Lu, Zhao Yi. Proteogenomics: Improving Genomes Annotation by Proteomics. PROGRESS IN BIOCHEMISTRY AND BIOPHYSICS[J]. 2013, 40(4): 297-308, https://www.webofscience.com/wos/woscc/full-record/WOS:000318059500001.
[32] Chi, Hao, Chen, Haifeng, He, Kun, Wu, Long, Yang, Bing, Sun, RuiXiang, Liu, Jianyun, Zeng, WenFeng, Song, ChunQing, He, SiMin, Dong, MengQiu. pNovo+: De Novo Peptide Sequencing Using Complementary HCD and ETD Tandem Mass Spectra. JOURNAL OF PROTEOME RESEARCH[J]. 2013, 12(2): 615-625, https://www.webofscience.com/wos/woscc/full-record/WOS:000314558800007.
[33] Zhang Kun, Wang LeHeng, Chi Hao, Bu DeChao, Yuan ZuoFei, Liu Chao, Fan ShengBo, Chen HaiFeng, Zeng WenFeng, Luo HaiTao, Sun RuiXiang, He SiMin, Xie Lu, Zhao Yi. Proteogenomics: Improving Genomes Annotation by Proteomics. PROGRESS IN BIOCHEMISTRY AND BIOPHYSICS[J]. 2013, 40(4): 297-308, https://www.webofscience.com/wos/woscc/full-record/WOS:000318059500001.
[34] Yuan ZuoFei, Wu Long, Liu Chao, Chi Hao, Fan ShengBo, Zhang Kun, Zeng WenFeng, Sun RuiXiang, He SiMin. Accurate Determination of Precursor Ions for Peptides in Large-scale Protein Identification. PROGRESS IN BIOCHEMISTRY AND BIOPHYSICS[J]. 2013, 40(1): 80-92, https://www.webofscience.com/wos/woscc/full-record/WOS:000314003100012.
[35] Yuan, ZuoFei, Liu, Chao, Wang, HaiPeng, Sun, RuiXiang, Fu, Yan, Zhang, JingFen, Wang, LeHeng, Chi, Hao, Li, You, Xiu, LiYun, Wang, WenPing, He, SiMin. pParse: A method for accurate determination of monoisotopic peaks in high-resolution mass spectra. PROTEOMICS[J]. 2012, 12(2): 226-235, [36] Yang, Bing, Wu, YanJie, Zhu, Ming, Fan, ShengBo, Lin, Jinzhong, Zhang, Kun, Li, Shuang, Chi, Hao, Li, YuXin, Chen, HaiFeng, Luo, ShuKun, Ding, YueHe, Wang, LeHeng, Hao, Zhiqi, Xiu, LiYun, Chen, She, Ye, Keqiong, He, SiMin, Dong, MengQiu. Identification of cross-linked peptides from complex samples. NATURE METHODS[J]. 2012, 9(9): 904-+, http://dx.doi.org/10.1038/nmeth.2099.
[37] Zhao, Yanmei, Sun, Wei, Zhang, Pan, Chi, Hao, Zhang, MeiJun, Song, ChunQing, Ma, Xuan, Shang, Yunlong, Wang, Bin, Hu, Youqiao, Hao, Zhiqi, Huehmer, Andreas F, Meng, Fanxia, LHernault, Steven W, He, SiMin, Dong, MengQiu, Miao, Long. Nematode sperm maturation triggered by protease involves sperm-secreted serine protease inhibitor (Serpin). PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA[J]. 2012, 109(5): 1542-1547, http://www.irgrid.ac.cn/handle/1471x/756868.
[38] Fu, Yan, Xiu, LiYun, Jia, Wei, Ye, Ding, Sun, RuiXiang, Qian, XiaoHong, He, SiMin. DeltAMT: A Statistical Algorithm for Fast Detection of Protein Modifications From LC-MS/MS Data. MOLECULAR & CELLULAR PROTEOMICS[J]. 2011, 10(5): http://dx.doi.org/10.1074/mcp.M110.000455.
[39] Sun RuiXiang, Dong MengQiu, Chi Hao, Yang Bing, Xiu LiYun, Wang LeHeng, Fu Yan, He SiMin. ECD/ETD-based Tandem Mass Spectrometry in Proteomics. PROGRESS IN BIOCHEMISTRY AND BIOPHYSICS[J]. 2010, 37(1): 94-102, https://www.webofscience.com/wos/woscc/full-record/WOS:000273981400014.
[40] Sun, RuiXiang, Dong, MengQiu, Song, ChunQing, Chi, Hao, Yang, Bing, Xiu, LiYun, Tao, Li, Jing, ZiuYi, Liu, Chao, Wang, LeHeng, Fu, Yan, He, SiMin. Improved Peptide Identification for Proteomic Analysis Based on Comprehensive Characterization of Electron Transfer Dissociation Spectra. JOURNAL OF PROTEOME RESEARCH[J]. 2010, 9(12): 6354-6367, https://www.webofscience.com/wos/woscc/full-record/WOS:000284856200024.
[41] 孙瑞祥, 董梦秋, 迟浩, 杨兵, 秀丽蕴, 王乐珩, 付岩, 贺思敏. 基于电子捕获裂解/电子转运裂解串联质谱技术的蛋白质组学研究. 生物化学与生物物理进展[J]. 2010, 94-102, http://lib.cqvip.com/Qikan/Article/Detail?id=1001273964.
[42] Ye, Ding, Fu, Yan, Sun, RuiXiang, Wang, HaiPeng, Yuan, ZuoFei, Chi, Hao, He, SiMin. Open MS/MS spectral library search to identify unanticipated post-translational modifications and increase spectral identification rate. BIOINFORMATICS[J]. 2010, 26(12): i399-i406, http://www.corc.org.cn/handle/1471x/2410669.
[43] Zhou, Chen, Chi, Hao, Wang, LeHeng, Li, You, Wu, YanJie, Fu, Yan, Sun, RuiXiang, He, SiMin. Speeding up tandem mass spectrometry-based database searching by longest common prefix. BMC BIOINFORMATICS[J]. 2010, 11(1): 577-577, http://www.corc.org.cn/handle/1471x/2408973.
[44] Wang, Leheng, Wang, Wenping, Chi, Hao, Wu, Yanjie, Li, You, Fu, Yan, Zhou, Chen, Sun, Ruixiang, Wang, Haipeng, Liu, Chao, Yuan, Zuofei, Xiu, Liyun, He, SiMin. An efficient parallelization of phosphorylated peptide and protein identification. RAPID COMMUNICATIONS IN MASS SPECTROMETRY[J]. 2010, 24(12): 1791-1798, http://www.corc.org.cn/handle/1471x/2406611.
[45] Song LiNa, Wang JingLan, Liu JinFeng, Lu Zhuang, Sui ShaoHui, Jia Wei, Yang Bing, Chi Hao, Wang LeHeng, He SiMin, Yu WenFeng, Meng LingYan, Chen Shuo, Peng Xu, Liang Yimin, Cai Yun, Qian XiaoHong. N-glycosylation proteome of endoplasmic reticulum in mouse liver by ConA affinity chromatography coupled with LTQ-FT mass spectrometry. SCIENCE CHINA-CHEMISTRY[J]. 2010, 53(4): 768-777, https://www.webofscience.com/wos/woscc/full-record/WOS:000278263400010.
[46] Chi, Hao, Sun, RuiXiang, Yang, Bing, Song, ChunQing, Wang, LeHeng, Liu, Chao, Fu, Yan, Yuan, ZuoFei, Wang, HaiPeng, He, SiMin, Dong, MengQiu. pNovo: De novo Peptide Sequencing and Identification Using HCD Spectra. JOURNAL OF PROTEOME RESEARCH[J]. 2010, 9(5): 2713-2724, http://www.corc.org.cn/handle/1471x/2406807.
[47] Li, You, Chi, Hao, Wang, LeHeng, Wang, HaiPeng, Fu, Yan, Yuan, ZuoFei, Li, SuJun, Liu, YanSheng, Sun, RuiXiang, Zeng, Rong, He, SiMin. Speeding up tandem mass spectrometry based database searching by peptide and spectrum indexing. RAPID COMMUNICATIONS IN MASS SPECTROMETRY[J]. 2010, 24(6): 807-814, https://www.webofscience.com/wos/woscc/full-record/WOS:000276111100014.
[48] Fu, Yan, Jia, Wei, Lu, Zhuang, Wang, Haipeng, Yuan, Zuofei, Chi, Hao, Li, You, Xiu, Liyun, Wang, Wenping, Liu, Chao, Wang, Leheng, Sun, Ruixiang, Gao, Wen, Qian, Xiaohong, He, SiMin. Efficient discovery of abundant post-translational modifications and spectral pairs using peptide mass and retention time differences. BMC BIOINFORMATICS[J]. 2009, 10(Suppl 1): S50-S50, https://www.webofscience.com/wos/woscc/full-record/WOS:000265601900050.
[49] Jia, Wei, Lu, Zhuang, Fu, Yan, Wang, HaiPeng, Wang, LeHeng, Chi, Hao, Yuan, ZuoFei, Zheng, ZhaoBin, Song, LiNa, Han, HuanHuan, Liang, YiMin, Wang, JingLan, Cai, Yun, Zhang, YuKui, Deng, YuLin, Ying, WanTao, He, SiMin, Qian, XiaoHong. A Strategy for Precise and Large Scale Identification of Core Fucosylated Glycoproteins. MOLECULAR & CELLULAR PROTEOMICS[J]. 2009, 8(5): 913-923, http://dx.doi.org/10.1074/mcp.M800504-MCP200.
[50] He, SiMin, Sun, ShuTao, Guan, HongTao, Zheng, Qiang, Zhao, YouJian, Gao, Wen. On guaranteed smooth switching for buffered crossbar switches. IEEE-ACM TRANSACTIONS ON NETWORKING[J]. 2008, 16(3): 718-731, https://www.webofscience.com/wos/woscc/full-record/WOS:000256967100018.
[51] Zhang, Jingfen, He, Simin, Ling, Charles X, Ca, Xingjun, Zeng, Rong, Gao, Wen. PeakSelect: preprocessing tandem mass spectra for better peptide identification. RAPID COMMUNICATIONS IN MASS SPECTROMETRY[J]. 2008, 22(8): 1203-1212, https://www.webofscience.com/wos/woscc/full-record/WOS:000255362300016.
[52] 孙书韬, 贺思敏, 郑燕峰, 高文. 缓冲交叉开关交换结构性能分析. 软件学报[J]. 2007, 18(11): 2800-2809, http://lib.cqvip.com/Qikan/Article/Detail?id=25789688.
[53] 孙书韬, 贺思敏, 郑燕峰, 高文. 缓冲交叉开关交换结构多播调度算法研究. 计算机研究与发展[J]. 2006, 43(6): 1036-1043, http://lib.cqvip.com/Qikan/Article/Detail?id=22033342.
[54] 孙瑞祥, 付岩, 李德泉, 张京芬, 王晓彪, 盛泉虎, 曾嵘, 陈益强, 贺思敏, 高文. 基于质谱技术的计算蛋白质组学研究. 中国科学. E辑, 技术科学[J]. 2006, 36(2): 222-234, [55] 孙书韬, 贺思敏, 郑燕峰, 高文. 队列长度加权服务的输入排队交换结构匹配算法. 计算机学报[J]. 2006, 29(6): 875-883, http://lib.cqvip.com/Qikan/Article/Detail?id=22019845.
[56] 贺思敏, 赵巍, 孙书韬, 高文. 用于数字视频广播传输网络的均匀复用方法. 科技开发动态. 2004, 37-37, http://lib.cqvip.com/Qikan/Article/Detail?id=11496929.
[57] 庞斌, 贺思敏, 高文. 高速IP路由器中输入排队调度算法综述. 软件学报[J]. 2003, 14(5): 1011-1022, http://lib.cqvip.com/Qikan/Article/Detail?id=7775109.

科研活动

   
科研项目
( 1 ) 面向数据库搜索的蛋白质组精准鉴定技术研究, 主持, 国家级, 2016-07--2021-06
( 2 ) 计算蛋白质组学创新交叉团队, 主持, 部委级, 2016-01--2018-12
( 3 ) 蛋白质组海量质谱数据的深度解析, 主持, 国家级, 2010-01--2014-08

指导学生

已指导学生

郑强  硕士研究生  081203-计算机应用技术  

王一  硕士研究生  081203-计算机应用技术  

迟浩  博士研究生  081203-计算机应用技术  

王文平  硕士研究生  081201-计算机系统结构  

周郴  硕士研究生  081203-计算机应用技术  

吴妍洁  硕士研究生  081203-计算机应用技术  

刘超  博士研究生  081203-计算机应用技术  

陈海丰  硕士研究生  081203-计算机应用技术  

何昆  硕士研究生  081203-计算机应用技术  

邬龙  硕士研究生  081203-计算机应用技术  

张昆  博士研究生  081203-计算机应用技术  

樊盛博  博士研究生  081203-计算机应用技术  

曾文锋  博士研究生  081203-计算机应用技术  

杨皓  博士研究生  081203-计算机应用技术  

王钊伟  硕士研究生  081203-计算机应用技术  

张晓今  硕士研究生  081203-计算机应用技术  

涂慧君  硕士研究生  081203-计算机应用技术  

吴建强  硕士研究生  085212-软件工程  

方润乾  硕士研究生  081203-计算机应用技术  

徐心仪  硕士研究生  081203-计算机应用技术  

王曦  硕士研究生  081203-计算机应用技术  

陈镇霖  博士研究生  081203-计算机应用技术  

现指导学生

周文婧  博士研究生  081203-计算机应用技术  

谭永卿  硕士研究生  081202-计算机软件与理论  

李金洋  硕士研究生  081203-计算机应用技术  

毛鹏志  博士研究生  081203-计算机应用技术