基本信息
贺超英  男  博导  中国科学院植物研究所
电子邮件: chaoying@ibcas.ac.cn
通信地址: 北京海淀香山南辛村20号系统与进化植物学国家重点实验室
邮政编码: 100093

招生信息

   
招生专业
071001-植物学
071007-遗传学
071008-发育生物学
招生方向
进化发育遗传学,功能基因组学
分子遗传学,基因组学
植物种质资源评估与利用

教育背景

1998-09--2001-09   中国科学院遗传研究所   博士学位
1995-09--1998-08   中国林业科学院亚热带林业研究所   硕士学位
1991-09--1995-08   西北师范大学   学士学位

工作经历

   
工作简历
2008-01~现在, 中国科学院植物研究所, 研究员
2006-06~2008-12,德国Max-Planck-Institute for Plant Breeding Research (Cologne), Co-group leader
2001-10~2006-05,德国Max-Planck-Institute for Plant Breeding Research (Cologne), 博士后
社会兼职
2020-01-01-今,Journal of Integrative Plant Biology, 编辑
2018-12-01-今,中国植物学会系统与进化植物学专业委员会, 副主任
2011-01-01-今,Journal of Systematics and Evolution, 副主编、编委

教授课程

进化发育生物学研讨课
进化发育生物学
植物的起源和系统发育

专利与奖励

   
专利成果
( 1 ) 一种与植物育性相关的蛋白及其编码基因与应用, 发明, 2011, 第 1 作者, 专利号: 201110087617.8
( 2 ) 粘果酸浆控制器官大小基因第一内含子的调控元件及应用, 发明, 2015, 第 1 作者, 专利号: 201410004958.8
( 3 ) 洋酸浆控制器官大小蛋白及其编码基因与应用, 发明, 2016, 第 1 作者, 专利号: 201410005276.9

出版信息

   
发表论文
[1] Gong, Pichang, Song, Chunjing, Liu, Hongyan, Li, Peigang, Zhang, Mingshu, Zhang, Jisi, Zhang, Shaohua, He, Chaoying. Physalis floridana CRABS CLAW mediates neofunctionalization of GLOBOSA genes in carpel development. JOURNAL OF EXPERIMENTAL BOTANY[J]. 2021, 72(20): 6882-6903, http://dx.doi.org/10.1093/jxb/erab309.
[2] Li, Qiaoxia, Li, Jigang, Zhang, Li, Pan, Chaochao, Yang, Ning, Sun, Kun, He, Chaoying. Gibberellins are required for dimorphic flower development in Viola philippica. PLANT SCIENCE[J]. 2021, 303: http://dx.doi.org/10.1016/j.plantsci.2020.110749.
[3] Zhao, Jing, Gong, Pichang, Liu, Hongyan, Zhang, Mingshu, He, Chaoying. Multiple and integrated functions of floral C-class MADS-box genes in flower and fruit development of Physalis floridana. PLANT MOLECULAR BIOLOGY[J]. 2021, 107(1-2): 101-116, http://dx.doi.org/10.1007/s11103-021-01182-4.
[4] Lu, Jiangjie, Luo, Meifang, Wang, Li, Li, Kunpeng, Yu, Yongyi, Yang, Weifei, Gong, Pichang, Gao, Huihui, Li, Qiaoru, Zhao, Jing, Wu, Lanfeng, Zhang, Mingshu, Liu, Xueyang, Zhang, Xuemei, Zhang, Xian, Kang, Jieyu, Yu, Tongyuan, Li, Zhimin, Jiao, Yuannian, Wang, Huizhong, He, Chaoying. The Physalis floridana genome provides insights into the biochemical and morphological evolution of Physalis fruits. HORTICULTURE RESEARCH[J]. 2021, 8(1): http://dx.doi.org/10.1038/s41438-021-00705-w.
[5] Gao, Huihui, Li, Jing, Wang, Li, Zhang, Jisi, He, Chaoying. Transcriptomic variation of the flower-fruit transition inPhysalisandSolanum. PLANTA[J]. 2020, 252(2): https://www.webofscience.com/wos/woscc/full-record/WOS:000552695800001.
[6] Li, Jing, Song, Chunjing, He, Chaoying. Chinese lantern in Physalis is an advantageous morphological novelty and improves plant fitness. SCIENTIFIC REPORTS[J]. 2019, 9(1): https://doaj.org/article/4706b860e44e463e8c7b185480dd9098.
[7] Wang, Yan, Gao, Huihui, He, Lingli, Zhu, Weiwei, Yan, Lixin, Chen, Qingshan, He, Chaoying. The PHOSPHATE1 genes participate in salt and Pi signaling pathways and play adaptive roles during soybean evolution. BMC PLANT BIOLOGY[J]. 2019, 19(1): http://dx.doi.org/10.1186/s12870-019-1959-8.
[8] 贺超英, 王丽, 严立新, 李巧茹, 雍斌, 朱韦韦. 果实起源与多样化的进化发育机制. 中国科学:生命科学[J]. 2019, 301-319, http://lib.cqvip.com/Qikan/Article/Detail?id=74678875504849574852484851.
[9] Gao, Huihui, Wang, Yan, Li, Wei, Gu, Yongzhe, Lai, Yongcai, Bi, Yingdong, He, Chaoying. Transcriptomic comparison reveals genetic variation potentially underlying seed developmental evolution of soybeans. JOURNAL OF EXPERIMENTAL BOTANY[J]. 2018, 69(21): 5089-5104, https://www.webofscience.com/wos/woscc/full-record/WOS:000448163900009.
[10] Hao, Zhenzhen, Gong, Pichang, He, Chaoying, Lin, Jinxing. Peptide Aptamers to Inhibit Protein Function in Plants. TRENDS IN PLANT SCIENCEnull. 2018, 23(4): 281-284, http://dx.doi.org/10.1016/j.tplants.2018.02.007.
[11] Gong, Pichang, Li, Jing, He, Chaoying. Exon junction complex (EJC) core genes play multiple developmental roles in Physalis floridana. PLANT MOLECULAR BIOLOGY[J]. 2018, 98(6): 545-563, http://dx.doi.org/10.1007/s11103-018-0795-9.
[12] Gong, Pichang, Ao, Xiang, Liu, Gaixiu, Cheng, Fangyun, He, Chaoying. Duplication and Whorl-Specific-Down Regulation of the Obligate AP3-PI Heterodimer Genes Explain the Origin of Paeonia lactiflora Plants with Spontaneous Corolla Mutation. PLANT AND CELL PHYSIOLOGY[J]. 2017, 58(3): 411-425, http://ir.ibcas.ac.cn/handle/2S10CLM1/13111.
[13] Gu, Yongzhe, Li, Wei, Jiang, Hongwei, Wang, Yan, Gao, Huihui, Liu, Miao, Chen, Qingshan, Lai, Yongcai, He, Chaoying. Differential expression of a WRKY gene between wild and cultivated soybeans correlates to seed size. JOURNAL OF EXPERIMENTAL BOTANY[J]. 2017, 68(11): 2717-2729, http://ir.ibcas.ac.cn/handle/2S10CLM1/12951.
[14] Wang, Yan, Gu, Yongzhe, Gao, Huihui, Qiu, Lijuan, Chang, Ruzhen, Chen, Shouyi, He, Chaoying. Molecular and geographic evolutionary support for the essential role of GIGANTEAa in soybean domestication of flowering time. BMC EVOLUTIONARY BIOLOGY[J]. 2016, 16(-): http://ir.ibcas.ac.cn/handle/2S10CLM1/14899.
[15] Li, Qiaoxia, Huo, Qingdi, Wang, Juan, Zhao, Jing, Sun, Kun, He, Chaoying. Expression of B-class MADS-box genes in response to variations in photoperiod is associated with chasmogamous and cleistogamous flower development in Viola philippica. BMC PLANT BIOLOGY[J]. 2016, 16(1): http://dx.doi.org/10.1186/s12870-016-0832-2.
[16] Gu, Yongzhe, Xing, Shilai, He, Chaoying. Genome-Wide Analysis Indicates Lineage-Specific Gene Loss during Papilionoideae Evolution. GENOME BIOLOGY AND EVOLUTION[J]. 2016, 8(3): 635-648, http://ir.ibcas.ac.cn/handle/2S10CLM1/12554.
[17] Zhang, Shaohua, Zhang, JiSi, Zhao, Jing, He, Chaoying. Distinct subfunctionalization and neofunctionalization of the B-class MADS-box genes in Physalis floridana. PLANTA[J]. 2015, 241(2): 387-402, http://ir.ibcas.ac.cn/handle/2S10CLM1/16882.
[18] Zhao, Man, Gu, Yongzhe, He, Lingli, Chen, Qingshan, He, Chaoying. Sequence and expression variations suggest an adaptive role for the DA1-like gene family in the evolution of soybeans. BMC PLANT BIOLOGY[J]. 2015, 15(1): http://dx.doi.org/10.1186/s12870-015-0519-0.
[19] Wang, Li, Li, Jing, Zhao, Jing, He, Chaoying. Evolutionary developmental genetics of fruit morphological variation within the Solanaceae. FRONTIERS IN PLANT SCIENCEnull. 2015, 6(-): http://ir.ibcas.ac.cn/handle/2S10CLM1/17234.
[20] Li, Zhichao, He, Chaoying. Physalis floridana Cell Number Regulator1 encodes a cell membrane-anchored modulator of cell cycle and negatively controls fruit size. JOURNAL OF EXPERIMENTAL BOTANY[J]. 2015, 66(1): 257-270, http://ir.ibcas.ac.cn/handle/2S10CLM1/17204.
[21] Zhang, JiSi, Zhao, Jing, Zhang, Shaohua, He, Chaoying. Efficient Gene Silencing Mediated by Tobacco Rattle Virus in an Emerging Model Plant Physalis. PLOS ONE[J]. 2014, 9(1): http://ir.ibcas.ac.cn/handle/2S10CLM1/15005.
[22] Gong, Pichang, Quan, Hui, He, Chaoying. Targeting MAGO proteins with a peptide aptamer reinforces their essential roles in multiple rice developmental pathways. PLANT JOURNAL[J]. 2014, 80(5): 905-914, http://ir.ibcas.ac.cn/handle/2S10CLM1/14997.
[23] Gong, Pichang, Zhao, Man, He, Chaoying. Slow Co-Evolution of the MAGO and Y14 Protein Families Is Required for the Maintenance of Their Obligate Heterodimerization Mode. PLOS ONE[J]. 2014, 9(1): https://doaj.org/article/d81a4af6899246ee84ebf58294f7a84a.
[24] He CY, Zhao M, He LL, Gu YZ, Wang Y, Chen QS. Genome-wide analyses of a plant-specific LIM-domain gene family implicate its evolutionary roles in plant diversification.. Genome Biology and Evolution[J]. 2014, 6(4): 1000-1012, http://ir.ibcas.ac.cn/handle/2S10CLM1/16942.
[25] Pichang Gong, Chaoying He. Uncovering divergence of rice EJC core heterodimer gene duplication reveals their essential role in growth, development and reproduction.. PLANT PHYSIOLOGY[J]. 2014, 165(3): 1047-1061, http://ir.ibcas.ac.cn/handle/2S10CLM1/15029.
[26] JiSi Zhang, Zhichao Li, Jing Zhao, Shaohua Zhang, Hui Quan, Man Zhao, Chaoying He. Deciphering the Physalis floridana Double-Layered-Lantern1 Mutant Provides Insights into Functional Divergence of the GLOBOSA Duplicates within the Solanaceae 1 C W. Plant Physiology. 2014, 164(2): 748-764, https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3912103/.
[27] Jing Zhao, Ying Tian, JiSi Zhang, Man Zhao, Pichang Gong, Simone Riss, Rainer Saedler, Chaoying He. The euAP1 Protein MPF3 Represses MPF2 to Specify Floral Calyx Identity and Displays Crucial Roles in Chinese Lantern Development in Physalis C W. The Plant Cell. 2013, 25(6): 2002-2021, https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3723609/.
[28] He, Lingli, Zhao, Man, Wang, Yan, Gai, Junyi, He, Chaoying. Phylogeny, structural evolution and functional diversification of the plant PHOSPHATE1 gene family: a focus on Glycine max. BMC EVOLUTIONARY BIOLOGY[J]. 2013, 13(1): 103-103, http://ir.ibcas.ac.cn/handle/2S10CLM1/15848.
[29] Zhang, Jisi, Khan, Muhammad Ramzan, Tian, Ying, Li, Zhichao, Riss, Simone, He, Chaoying. Divergences of MPF2-like MADS-domain proteins have an association with the evolution of the inflated calyx syndrome within Solanaceae. PLANTA[J]. 2012, 236(4): 1247-1260, http://ir.ibcas.ac.cn/handle/2S10CLM1/12655.
[30] Khan, Muhammad Ramzan, Hu, Jinyong, He, Chaoying. Plant hormones including ethylene are recruited in calyx inflation in Solanaceous plants. JOURNAL OF PLANT PHYSIOLOGY[J]. 2012, 169(10): 940-948, http://dx.doi.org/10.1016/j.jplph.2012.02.015.
[31] Wang, Li, Li, Zhichao, He, Chaoying. Transcriptome-wide mining of the differentially expressed transcripts for natural variation of floral organ size in Physalis philadelphica. JOURNAL OF EXPERIMENTAL BOTANY[J]. 2012, 63(18): 6457-6465, http://ir.ibcas.ac.cn/handle/2S10CLM1/15720.
[32] Lingli HE, Jing ZHAO, Man ZHAO, Chaoying HE. Current development and application of soybean genomics. Frontiers in Biology[J]. 2011, 6(4): 337-348, [33] Zhang, Jisi, Tian, Ying, Wang, Li, He, Chaoying. Functional evolutionary developmental biology (evo-devo) of morphological novelties in plants. JOURNAL OF SYSTEMATICS AND EVOLUTIONnull. 2010, 48(2): 94-101, http://lib.cqvip.com/Qikan/Article/Detail?id=33395296.
[34] He, Chaoying, Tian, Ying, Saedler, Rainer, Efremova, Nadia, Riss, Simone, Khan, Muhammad Ramzan, Yephremov, Alexander, Saedler, Heinz. The MADS-domain protein MPF1 of Physalis floridana controls plant architecture, seed development and flowering time. PLANTA[J]. 2010, 231(3): 767-777, http://dx.doi.org/10.1007/s00425-009-1087-z.
[35] 贺超英. MPF2-like-A MADS-box genes control the inflated calyx syndrome in Withania (Solanaceae): roles of Darwinian’s selection. Mol Biol Evol. 2009, [36] 贺超英. PFMAGO, a MAGO NASHI-like factor, interacts with the MADS-box protein MPF2 from Physalis floridana. Molecular Evolution and Biology. 2007, [37] He, Chaoying, Saedler, Heinz. Hormonal control of the inflated calyx syndrome, a morphological novelty, in Physalis. PLANT JOURNAL[J]. 2007, 49(5): 935-946, https://www.webofscience.com/wos/woscc/full-record/WOS:000244280300014.
[38] He, CY, Saedler, H. Heterotopic expression of MPF2 is the key to the evolution of the Chinese lantern of Physalis, a morphological novelty in Solanaceae. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA[J]. 2005, 102(16): 5779-5784, https://www.webofscience.com/wos/woscc/full-record/WOS:000228565200028.

科研活动

   
科研项目
( 1 ) “中国灯笼”进化发育与适应环境的分子基础研究, 主持, 国家级, 2014-01--2016-12
( 2 ) 植物外显子拼接复合体(EJC)功能与进化研究, 主持, 国家级, 2014-01--2017-12
( 3 ) 植物果实进化发育遗传学, 主持, 国家级, 2016-01--2020-12
( 4 ) 大豆高产分子模块解析, 主持, 部委级, 2014-06--2018-07
( 5 ) BTZ基因家族调控花器官发育稳态的功能进化研究, 主持, 国家级, 2019-01--2022-12
( 6 ) 茄科酸浆属果实发育调控与进化机制研究, 主持, 部委级, 2018-08--2023-08
( 7 ) 大豆高产分子模块解析, 主持, 部委级, 2019-01--2022-12
( 8 ) 植物生殖器官适应性进化和可塑性的遗传基础研究, 主持, 国家级, 2020-01--2024-12

指导学生

已指导学生

张吉斯  博士研究生  071001-植物学  

公丕昌  博士研究生  071001-植物学  

李志超  博士研究生  071001-植物学  

何玲莉  博士研究生  071001-植物学  

张少华  硕士研究生  071001-植物学  

赵嫚  博士研究生  071001-植物学  

全慧  博士研究生  071001-植物学  

赵婧  博士研究生  071001-植物学  

谷勇哲  博士研究生  071001-植物学  

宋春静  硕士研究生  071001-植物学  

李菁  博士研究生  071001-植物学  

贺文超  硕士研究生  071001-植物学  

高慧慧  博士研究生  071001-植物学  

现指导学生

严立新  硕士研究生  071001-植物学  

罗媚方  硕士研究生  071001-植物学  

李巧茹  博士研究生  071001-植物学  

魏思明  博士研究生  071001-植物学  

朱韦韦  博士研究生  071001-植物学  

孙中惠  硕士研究生  071001-植物学  

柳雪阳  硕士研究生  071001-植物学  

武兰凤  硕士研究生  071001-植物学  

张铭书  硕士研究生  071001-植物学  

雍斌  博士研究生  071001-植物学  

李培纲  博士研究生  071001-植物学  

刘洪岩  硕士研究生  071001-植物学  

许楠  硕士研究生  071001-植物学  

安正红  硕士研究生  071001-植物学  

李兵兵  博士研究生  071001-植物学