基本信息
柏仕杰  男  硕导  中国科学院深海科学与工程研究所
电子邮件: baishijie@idsse.ac.cn
通信地址: 海南省三亚市鹿回头路28号
邮政编码:

招生信息

   
招生专业
070703-海洋生物学
招生方向
微生物学

教育背景

2009-10--2011-11   美国俄克拉荷马大学   联合培养博士研究生
2008-09--2012-06   厦门大学   博士
2005-09--2008-06   广东海洋大学   硕士
2001-09--2005-06   中南林业科技大学   学士

工作经历

   
工作简历
2021-01~现在, 中国科学院深海科学与工程研究所, 副研究员
2017-11~2018-12,美国俄亥俄州立大学, 访问学者
2014-01~2020-12,中国科学院深海科学与工程研究所, 助理研究员
2012-09~2013-12,中国科学院水生生物研究所, 博士后

专利与奖励

   
奖励信息
(1) 海南省拔尖人才, 省级, 2020

出版信息

   
发表论文
[1] Microorganisms. 2024,   通讯作者  
[2] Marine Genomics. 2024, 第 1 作者
[3] 柏仕杰, 黄兆松, 李学恭. Genome analysis of Rossellomorea sp. y25, a deep sea bacterium isolated from the sediments of South China Sea. Marine Genomics[J]. 2024, 第 1 作者
[4] 梁阳阳, 王子嘉, 高娜, 齐晓雪, 曾俊涛, 崔凯, 卢文轩, 柏仕杰. Variations and Interseasonal Changes in the Gut Microbial Communities of Seven Wild Fish Species in a Natural Lake with Limited Water Exchange during the Closed Fishing Season. Microorganisms[J]. 2024, 第 8 作者  通讯作者  
[5] Frontiers in Microbiology. 2023, 第 5 作者
[6] International Journal of Systematic and Evolutionary Microbiology. 2023, 第 5 作者
[7] The Innovation Geoscience. 2023, 第 4 作者
[8] Bai, Shijie, Zhang, Jian, Qi, Xiaoxue, Zeng, Juntao, Wu, Shijun, Peng, Xiaotong. Changes of In Situ Prokaryotic and Eukaryotic Communities in the Upper Sanya River to the Sea over a Nine-Hour Period. MICROORGANISMS[J]. 2023, 第 1 作者  通讯作者  11(2): http://dx.doi.org/10.3390/microorganisms11020536.
[9] Li, Taisi, Li, Jiwei, Longman, Jack, Zhang, ZheXuan, Qu, Yuangao, Chen, Shun, Bai, Shijie, Dasgupta, Shamik, Xu, Henchao, Ta, Kaiwen, Liu, Shuangquan, Peng, Xiaotong. Chemolithotrophic biosynthesis of organic carbon associated with volcanic ash in the Mariana Trough, Pacific Ocean. COMMUNICATIONS EARTH & ENVIRONMENT[J]. 2023, 第 7 作者4(1): 1, https://doaj.org/article/bdd14954600448d8b001427134426017.
[10] Ze-Xi Jiao, 李学恭, Huan-Huan Zhang, Jun Xu, Shi-Jie Bai, Jie Dai, Jin Lin, Wei-Jia Zhang, Xiao-Qing Qi, Long-Fei Wu. Crassaminicella indica sp. nov., a novel thermophilic anaerobic bacterium isolated from a deep-sea hydrothermal vent. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY[J]. 2023, 第 5 作者73(3): https://www.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.005725.
[11] Youyou Li, Meifang Xiao, Yun Zhang, Zihan Li, Shijie Bai, Haoxiang Su, Ruoyan Peng, Gaoyu Wang, Xiaoyuan Hu, Xinran Song, Xin Li, Chuanning Tang, Gang Lu, Feifei Yin, Peijun Zhang, Jiang Du. Identification of two novel papillomaviruses in belugas. FRONTIERS IN MICROBIOLOGY[J]. 2023, 第 5 作者14: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10411887/.
[12] Bai, Shijie, Zhang, Peijun, Zhang, Xianfeng, Yang, Zixin, Li, Songhai. Gut Microbial Characterization of Melon-Headed Whales (Peponocephala electra) Stranded in China. MICROORGANISMS[J]. 2022, 第 1 作者10(3): http://dx.doi.org/10.3390/microorganisms10030572.
[13] Ma, Zhonglin, Gao, Long, Sun, Mingxue, Liao, Yongjie, Bai, Shijie, Wu, Zijun, Li, Jiangtao. Microbial Diversity in Groundwater and Its Response to Seawater Intrusion in Beihai City, Southern China. FRONTIERS IN MICROBIOLOGY[J]. 2022, 第 5 作者13: http://dx.doi.org/10.3389/fmicb.2022.876665.
[14] Peijun Zhang, et al.. Identification of a Novel Astrovirus in Pinnipeds. Frontiers in Microbiology[J]. 2022, 
[15] Li, Jiangtao, Gu, Lingyuan, Bai, Shijie, Wang, Jie, Su, Lei, Wei, Bingbing, Zhang, Li, Fang, Jiasong. Characterization of particle-associated and free-living bacterial and archaeal communities along the water columns of the South China Sea. BIOGEOSCIENCES[J]. 2021, 第 3 作者18(1): 113-133, https://doaj.org/article/4d9e170b52cb463da5ae1d60449970b3.
[16] Bai, Shijie, Zhang, Peijun, Lin, Mingli, Lin, Wenzhi, Yang, Zixin, Li, Songhai. Microbial diversity and structure in the gastrointestinal tracts of two stranded short-finned pilot whales (Globicephala macrorhynchus) and a pygmy sperm whale (Kogia breviceps). INTEGRATIVE ZOOLOGY[J]. 2021, 第 1 作者16(3): 324-335, https://www.webofscience.com/wos/woscc/full-record/WOS:000594766000001.
[17] Bai, Shijie, Zhang, Peijun, Zhang, Changhao, Du, Jiang, Du, Xinyi, Zhu, Chengwei, Liu, Jun, Xie, Peiyu, Li, Songhai. Comparative Study of the Gut Microbiota Among Four Different Marine Mammals in an Aquarium. FRONTIERS IN MICROBIOLOGY[J]. 2021, 第 1 作者12: http://dx.doi.org/10.3389/fmicb.2021.769012.
[18] Li, Jiangwei, Hu, Anyi, Bai, Shijie, Yang, Xiaoyong, Sun, Qian, Liao, Xu, Yu, ChangPing. Characterization and Performance of Lactate-Feeding Consortia for Reductive Dechlorination of Trichloroethene. MICROORGANISMS[J]. 2021, 第 3 作者9(4): https://doaj.org/article/577a976072f541d0aae1610827a2338b.
[19] Li, Jiwei, Li, Ling, Bai, Shijie, Chen, Shun, Xu, Hengchao, Ta, Kaiwen, Qu, Yuangao, Wang, Yuguang, Yao, Huiqiang, Dong, Yanhui, Dasgupta, Shamik, Du, Mengran, Liu, Shuangquan, Lin, Fanyu, Peng, Xiaotong. Geochemical and molecular characteristics of ferromanganese deposits and surrounding sediments in the Mariana Trench: An Implication for the geochemical Mn cycle in sedimentary environments of the trench zone. GEOCHIMICA ET COSMOCHIMICA ACTA[J]. 2021, 第 3 作者310: 155-168, http://dx.doi.org/10.1016/j.gca.2021.07.018.
[20] Bai, Shijie, Xu, Hengchao, Peng, Xiaotong. Microbial Communities of the Hydrothermal Scaly-Foot Snails From Kairei and Longqi Vent Fields. FRONTIERS IN MARINE SCIENCE[J]. 2021, 第 1 作者8: http://dx.doi.org/10.3389/fmars.2021.764000.
[21] Wang, Gaoyu, Huang, Yi, Zhang, Weijia, Peng, Ruoyan, Luo, Jun, Liu, Sisi, Bai, Shijie, Hu, Xiaoyuan, Wu, Zhiqiang, Yang, Fan, Shen, Shu, Zhang, Yun, Tang, Chuanning, Cui, Xiuji, Niu, Lina, Lu, Gang, Li, Songhai, Deng, Fei, Zhang, Peijun, Du, Jiang, Yin, Feifei. Identification and genome analysis of a novel picornavirus from captive belugas (Delphinapterus leucas) in China. SCIENTIFIC REPORTS[J]. 2021, 第 7 作者11(1): http://dx.doi.org/10.1038/s41598-021-00605-y.
[22] Li, Jiwei, Chen, Zhiyan, Li, Xinxin, Chen, Shun, Xu, Hengchao, Ta, Kaiwen, Dasgupta, Shamik, Bai, Shijie, Du, Mengran, Liu, Shuangquan, Peng, Xiaotong. The Sources of Organic Carbon in the Deepest Ocean: Implication From Bacterial Membrane Lipids in the Mariana Trench Zone. FRONTIERS IN EARTH SCIENCE[J]. 2021, 第 8 作者9: https://doaj.org/article/bf4d9082b5634f9f85c5d05937b7f32e.
[23] Chen, Zhiyan, Li, Jiwei, Li, Xinxin, Chen, Shun, Dasgupta, Shamik, Bai, Shijie, Ta, Kaiwen, Xu, Hengchao, Du, Mengran, Peng, Xiaotong. Characteristics and implications of isoprenoid and hydroxy tetraether lipids in hadal sediments of Mariana and Yap Trenches. CHEMICAL GEOLOGY[J]. 2020, 第 6 作者551: http://dx.doi.org/10.1016/j.chemgeo.2020.119742.
[24] Peng, X, Guo, Z, Du, M, Czaja, A D, Papineau, D, Chen, S, Xu, H, Li, J, Ta, K, Bai, S, Dasgupta, S. Past endolithic life in metamorphic ocean crust. GEOCHEMICAL PERSPECTIVES LETTERS[J]. 2020, 14: 14-19, https://www.webofscience.com/wos/woscc/full-record/WOS:000544339900001.
[25] Li, Jiangtao, Yang, Jingyu, Sun, Mingxue, Su, Lei, Wang, Hu, Gao, Jianqi, Bai, Shijie. Distribution and Succession of Microbial Communities Along the Dispersal Pathway of Hydrothermal Plumes on the Southwest Indian Ridge. FRONTIERS IN MARINE SCIENCE[J]. 2020, 第 7 作者  通讯作者  7: https://doaj.org/article/bcd2e5659de3474ea46c39a11f544c9e.
[26] Gao, Qun, Wang, Gangsheng, Xue, Kai, Yang, Yunfeng, Xie, Jianping, Yu, Hao, Bai, Shijie, Liu, Feifei, He, Zhili, Ning, Daliang, Hobbie, Sarah E, Reich, Peter B, Zhou, Jizhong. Stimulation of soil respiration by elevated CO2 is enhanced under nitrogen limitation in a decade-long grassland study. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA[J]. 2020, 第 7 作者117(52): 33317-33324, https://www.webofscience.com/wos/woscc/full-record/WOS:000604551600065.
[27] Li, Ling, Bai, Shijie, Li, Jiwei, Wang, Shiming, Tang, Limei, Dasgupta, Shamik, Tang, Yongjie, Peng, Xiaotong. Volcanic ash inputs enhance the deep-sea seabed metal-biogeochemical cycle: A case study in the Yap Trench, western Pacific Ocean. MARINE GEOLOGY[J]. 2020, 第 2 作者430: http://dx.doi.org/10.1016/j.margeo.2020.106340.
[28] Bai, Shijie, Hou, Gang. Microbial communities on fish eggs from Acanthopagrus schlegelii and Halichoeres nigrescens at the XuWen coral reef in the Gulf of Tonkin. PEERJ[J]. 2020, 第 1 作者8: https://doaj.org/article/4926e9742db9498d8c54ba73f178a1a6.
[29] Xu, Hengchao, Du, Mengran, Li, Jiangtao, Zhang, Haibin, Chen, Wanli, Wei, Jiangong, Wu, Zijun, Zhang, Hanyu, Li, Jiwei, Chen, Shun, Ta, Kaiwen, Bai, Shijie, Peng, Xiaotong. Spatial distribution of seepages and associated biological communities within Haima cold seep field, South China Sea. JOURNAL OF SEA RESEARCH[J]. 2020, 第 12 作者165: http://dx.doi.org/10.1016/j.seares.2020.101957.
[30] Fahnestock, M F, Bryce, J G, McCalley, C K, Montesdeoca, M, Bai, S, Li, Y, Driscoll, C T, Crill, P M, Rich, V, I, Varner, R K. Mercury reallocation in thawing subarctic peatlands. GEOCHEMICAL PERSPECTIVES LETTERS[J]. 2019, 11: 33-38, https://www.webofscience.com/wos/woscc/full-record/WOS:000489986100001.
[31] Jiwei Li, Ling Li, Shijie Bai, Kaiwen Ta, Hengchao Xu, Shun Chen, Jie Pan, Meng Li, Mengran Du, Xiaotong Peng. New insight into the biogeochemical cycling of methane, S and Fe above the Sulfate-Methane Transition Zone in methane hydrate-bearing sediments: A case study in the Dongsha area, South China Sea. DEEP-SEA RESEARCH PART I[J]. 2019, 第 3 作者145(1): 97-108, http://ir.idsse.ac.cn/handle/183446/6741.
[32] H Xu, X Peng, S Bai, K Ta, S Yang, S Liu, H B Jang, Z Guo. Precipitation of calcium carbonate mineral induced by viral lysis of cyanobacteria: evidence from laboratory experiments. BIOGEOSCIENCES[J]. 2019, 16(4): 949-960, https://doaj.org/article/cdf9b44042f840cd921e4ffb4f1c9200.
[33] Li, Jiwei, Li, Ling, Bai, Shijie, Ta, Kaiwen, Xu, Hengchao, Chen, Shun, Pan, Jie, Li, Meng, Du, Mengran, Peng, Xiaotong. New insight into the biogeochemical cycling of methane, S and Fe above the Sulfate-Methane Transition Zone in methane hydrate-bearing sediments: A case study in the Dongsha area, South China Sea. DEEP-SEA RESEARCH PART I-OCEANOGRAPHIC RESEARCH PAPERS[J]. 2019, 第 3 作者145(1): 97-108, http://ir.idsse.ac.cn/handle/183446/6741.
[34] Li, Jiwei, Peng, Xiaotong, Bai, Shijie, Chen, Zhiyan, Van Nostrand, Joy D. Biogeochemical processes controlling authigenic carbonate formation within the sediment column from the Okinawa Trough. GEOCHIMICA ET COSMOCHIMICA ACTA[J]. 2018, 第 3 作者222: 363-382, http://ir.idsse.ac.cn/handle/183446/5922.
[35] Peng, X, Chen, M, Chen, S, Dasgupta, S, Xu, H, Ta, K, Du, M, Li, J, Guo, Z, Bai, S. Microplastics contaminate the deepest part of the world's ocean. GEOCHEMICAL PERSPECTIVES LETTERS[J]. 2018, 9(1): 1-5, http://ir.idsse.ac.cn/handle/183446/6396.
[36] An, Weixing, Guo, Feng, Song, Yulong, Gao, Na, Bai, Shijie, Dai, Jingcheng, Wei, Hehong, Zhang, Liping, Yu, Dianzhen, Xia, Ming, Yu, Ying, Qi, Ming, Tian, Chunyuan, Chen, Haofeng, Wu, Zhenbin, Zhang, Tong, Qiu, Dongru. Comparative genomics analyses on EPS biosynthesis genes required for floc formation of Zoogloea resiniphila and other activated sludge bacteria. WATER RESEARCH[J]. 2016, 第 5 作者102: 494-504, http://dx.doi.org/10.1016/j.watres.2016.06.058.
[37] Bai, Shijie, Dai, Jingcheng, Xia, Ming, Ruan, Jing, Wei, Hehong, Yu, Dianzhen, Li, Ronghui, Jing, Hongmei, Tian, Chunyuan, Song, Lirong, Qiu, Dongru. Effects of intermediate metabolite carboxylic acids of TCA cycle on Microcystis with overproduction of phycocyanin. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH[J]. 2015, 第 1 作者22(7): 5531-5537, http://www.irgrid.ac.cn/handle/1471x/978615.
[38] Su, JianQiang, Ding, LongJun, Xue, Kai, Yao, HuaiYing, Quensen, John, Bai, ShiJie, Wei, WenXue, Wu, JinShui, Zhou, Jizhong, Tiedje, James M, Zhu, YongGuan. Long-term balanced fertilization increases the soil microbial functional diversity in a phosphorus-limited paddy soil. MOLECULAR ECOLOGY[J]. 2015, 第 6 作者24(1): 136-150, http://ir.rcees.ac.cn/handle/311016/32898.
[39] Mengxin Zhao, Feng Wang, Shanshan Liu, Kai Xue, Yuting Liang, Shijie Bai, Zhili He, Joy D Van Nostrand, Jizhong Zhou, Yunfeng Yang, Bo Sun. GeoChip profiling of microbial community in response to global changes simulated by soil transplant and cropping. GENOMICS DATA[J]. 2014, 第 6 作者2(C): 166-169, http://dx.doi.org/10.1016/j.gdata.2014.06.002.
[40] Bai, Shijie, Li, Jiangwei, He, Zhili, Van Nostrand, Joy D, Tian, Yun, Lin, Guanghui, Zhou, Jizhong, Zheng, Tianling. GeoChip-based analysis of the functional gene diversity and metabolic potential of soil microbial communities of mangroves. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY[J]. 2013, 第 1 作者97(15): 7035-7048, http://dx.doi.org/10.1007/s00253-012-4496-z.
[41] []. Mangrovimonas yunxiaonensis gen. nov., sp. nov., isolated from mangrove sediment. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY[J]. 2012, 
[42] Bai, Shijie J, Huang, Liping P, Su, Jianqiang Q, Tian, Yun, Zheng, Tianling L. Algicidal Effects of a Novel Marine Actinomycete on the Toxic Dinoflagellate Alexandrium tamarense. CURRENT MICROBIOLOGY[J]. 2011, 62(6): 1774-1781, https://www.webofscience.com/wos/woscc/full-record/WOS:000292561100018.
[43] Wang, B X, Zhou, Y Y, Bai, S J, Su, J Q, Tian, Y, Zheng, T L, Yang, X R. A novel marine bacterium algicidal to the toxic dinoflagellate Alexandrium tamarense. LETTERS IN APPLIED MICROBIOLOGY[J]. 2010, 51(5): 552-557, https://www.webofscience.com/wos/woscc/full-record/WOS:000282816000011.
[44] Zhao Mengxin, Xue Kai, Wang Feng, Liu Shanshan, Bai Shijie, Sun Bo, Zhou Jizhong, Yang Yunfeng. Microbial mediation of biogeochemical cycles revealed by simulation of global changes with soil transplant and cropping. THE ISME JOURNAL. 第 5 作者8(10): 2045-2055, 
[45] Zhang, Peijun, Goodman, Simon J, OConnell, Mary J, Bai, Shijie, Li, Songhai. Marine mammal genomes: Important resources for unravelling adaptation and evolution in the marine environment. THE INNOVATION GEOSCIENCE[J]. 第 4 作者-: 

科研活动

   
科研项目
( 1 ) ROV生物地球化学探查技术应用, 负责人, 国家任务, 2017-07--2021-12
( 2 ) 原位微生物富集与实验系统研制, 负责人, 国家任务, 2021-12--2025-12
( 3 ) 火山灰输入对深海生态环境演变和深海铁循环的作用机理, 负责人, 地方任务, 2022-07--2025-06
( 4 ) 三亚湾沉积物中病毒的时空分布特征及环境制约因素研究, 负责人, 地方任务, 2023-03--2026-02
( 5 ) 深海沉积物孔隙水保压取样器, 负责人, 地方任务, 2022-11--2024-12

指导学生

现指导学生

曾俊滔  硕士研究生  070703-海洋生物学