070703-海洋生物学
0707Z1-海洋生态学

海洋生物多样性与进化，遗传学与遗传工程，基因组学
生物资源生态学

2008-09--2012-10   德国不来梅大学   海洋生物学博士
2005-09--2008-06   中国海洋大学   生态学硕士
2001-09--2005-06   中国海洋大学   生态学学士

   

2016-01~现在, 中国科学院海洋研究所, 副研究员
2013-04~2015-12,中国科学院海洋研究所, 助理研究员

2020-04-02-今,比利时弗兰德斯研究基金会Research Foundation Flanders (FWO)评审会成员（FWO Review College）,

   

（1） 深海甲壳动物多样性及起源演化研究, 一等奖, 部委级, 2021

   

（1） Full-length 16S rRNA amplicon sequencing reveals the variation of epibiotic microbiota associated with two shrimp species of Alvinocarididae: possibly co-determined by environmental heterogeneity and specific recognition of hosts, PEERJ, 2022, 第 1 作者
（2） Full-Length Transcriptome Comparison Provides Novel Insights into the Molecular Basis of Adaptation to Different Ecological Niches of the Deep-Sea Hydrothermal Vent in Alvinocaridid Shrimps, DIVERSITY-BASEL, 2022, 通讯作者
（3） 深海化能生态系统大型生物多样性分布格局及其起源演化研究进展, 海洋与湖沼, 2021, 通讯作者
（4） Eyes of diff ering colors in Alvinocaris longirostris from deep-sea chemosynthetic ecosystems: genetic and molecular evidence of its formation mechanism, Eyes of differing colors in Alvinocaris longirostris from deep-sea chemosynthetic ecosystems: genetic and molecular evidence of its formation mechanism, JOURNAL OF OCEANOLOGY AND LIMNOLOGY, 2021, 第 2 作者
（5） Transcriptomic analysis reveals insights into deep-sea adaptations of the dominant species, Shinkaia crosnieri (Crustacea: Decapoda: Anomura), inhabiting both hydrothermal vents and cold seeps, BMC GENOMICS, 2019, 第 2 作者
（6） Molecular phylogeny of the genus Clibanarius (Decapoda: Anomura: Diogenidae) based on mitochondrial and nuclear DNA sequences, Molecular phylogeny of the genus Clibanarius (Decapoda:Anomura:Diogenidae) based on mitochondrial and nuclear DNA sequences, 海洋湖沼学报(英文), 2019, 第 3 作者
（7） Primary molecular basis of androgenic gland endocrine sex regulation revealed by transcriptome analysis in Eriocheir sinensis, JOURNAL OF OCEANOLOGY AND LIMNOLOGY, 2019, 第 3 作者
（8） Molecular phylogeny of the genus Clibanarius (Decapoda:Anomura:Diogenidae) based on mitochondrial and nuclear DNA sequences, JOURNAL OF OCEANOLOGY AND LIMNOLOGY, 2019, 第 3 作者
（9） Genetic population structure in the swimming crab, Portunus trituberculatus and its implications for fishery management, JOURNAL OF THE MARINE BIOLOGICAL ASSOCIATION OF THE UNITED KINGDOM, 2019, 通讯作者
（10） Adaptation to the deep-sea hydrothermal vents and cold seeps: Insights from the transcriptomes of Alvinocaris longirostris in both environments, DEEP-SEA RESEARCH PART I-OCEANOGRAPHIC RESEARCH PAPERS, 2018, 第 1 作者
（11） First comprehensive analysis of lysine acetylation in Alvinocaris longirostris from the deep-sea hydrothermal vents, BMC GENOMICS, 2018, 第 1 作者
（12） Adaptation to the deep-sea hydrothermal vents and cold seeps: Insights from the transcriptomes of Alvinocaris longirostris in both environments, DEEP-SEA RESEARCH PART I, 2018, 第 1 作者
（13） Concordance of microsatellite and mitochondrial DNA markers in detecting genetic population structure in the boring giant clam Tridacna crocea across the Indo-Malay Archipelago, MARINE ECOLOGY-AN EVOLUTIONARY PERSPECTIVE, 2017, 通讯作者
（14） Identification of genomic regions and candidate genes associated with growth of Eriocheir Sinensis by QTL mapping and marker annotation, AQUACULTURE RESEARCH, 2017, 第 1 作者
（15） Transcriptome profiles of embryos before and after cleavage in eriocheir sinensis: identification of developmental genes at the earliest stages, CHINESE JOURNAL OF OCEANOLOGY AND LIMNOLOGY, 2017, 第 1 作者
（16） Molecular characterization and expression profiles of four transformer-2 isoforms in the Chinese mitten crab Eriocheir sinensis, CHINESE JOURNAL OF OCEANOLOGY AND LIMNOLOGY, 2017, 第 3 作者
（17） Exploring the molecular basis of adaptive evolution in hydrothermal vent crab Austinograea alayseae by transcriptome analysis, PLOS ONE, 2017, 第 1 作者
（18） First complete mitochondrial genome of primitive crab Homologenus malayensis (Decapoda: Brachyura: Podotremata: Homolidae), MITOCHONDRIAL DNA PART A, 2016, 第 1 作者
（19） Unusual sequence features and gene rearrangements of primitive crabs revealed by three complete mitochondrial genomes of Dromiacea, COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY D-GENOMICS & PROTEOMICS, 2016, 第 3 作者
（20） Comparative genetic population structure of three endangered giant clams (Tridacnidae) throughout the Indo-West Pacific: implications for divergence, connectivity, and conservation, Journal of Molluscan Studies, 2016, 第 1 作者
（21） Comparative transcriptomic analysis provides insights into the molecular basis of the metamorphosis and nutrition metabolism change from zoeae to megalopae in Eriocheir sinensis, COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY - PART D: GENOMICS AND PROTEOMICS, 2015, 第 2 作者
（22） Comparative Transcriptome Analysis Reveals Sex-Biased Gene Expression in Juvenile Chinese Mitten Crab Eriocheir sinensis, PLOS ONE, 2015, 第 2 作者
（23） The complete mitochondrial genomes of Umalia orientalis and Lyreidus brevifrons: The phylogenetic position of the family Raninidae within Brachyuran crabs, MARINE GENOMICS, 2015, 第 3 作者
（24） High density linkage mapping aided by transcrptomics documents ZW sex determination system in the Chinese mitten crab Eriocheir sinensis, Heredity（并列1作）, 2015, 第 1 作者
（25） Comparative transcriptomic analysis provides insights into the molecular basis of brachyurization and adaptation to benthic lifestyle in Eriocheir sinensis, GENE, 2015, 第 3 作者
（26） Molecular characterization and expression profile of three Fem-1 genes in Eriocheir sinensis provide a new insight into crab sex-determining mechanism, COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY B-BIOCHEMISTRY & MOLECULAR BIOLOGY, 2015, 第 3 作者
（27） Comparative Transcriptome Analysis Reveals Sex-Biased Gene Expression in Juvenile Chinese Mitten Crab Eriocheir sinensis, PLOS ONE, 2015, 第 2 作者
（28） Comparative transcriptomic analysis provides insights into the molecular basis of the metamorphosis and nutrition metabolism change from zoeae to megalopae in Eriocheir sinensis, COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY D-GENOMICS & PROTEOMICS, 2015, 第 2 作者
（29） PtSerpin from the swimming crab Portunus trituberculatus, a putative regulator of prophenoloxidase activation with antibacterial activity, FISH & SHELLFISH IMMUNOLOGY, 2014, 第 7 作者
（30） Transcriptome Changes in Eriocheir sinensis Megalopae after Desalination Provide Insights into Osmoregulation and Stress Adaption in Larvae, PLOS ONE, 2014, 第 1 作者
（31） Development of 24 tri- and tetranucleotide microsatellite markers in the Zhikong scallop Chlamys farreri from fosmid library sequences, MARINE BIODIVERSITY, 2013, 通讯作者
（32） Transcriptome Profiling Analysis on Whole Bodies of Microbial Challenged Eriocheir sinensis Larvae for Immune Gene Identification and SNP Development, PLOS ONE, 2013, 第 5 作者
（33） Isolation and characterisation of nine microsatellite markers in the boring giant clam (Tridacna crocea) and cross-amplification in five other tridacnid species, MARINE BIODIVERSITY, 2012, 通讯作者
（34） Ten polymorphic dinucleotide microsatellite markers of the noble scallop Chlamys nobilis, MOLECULAR ECOLOGY NOTES, 2006, 第 1 作者

   

（ 1 ） 南海岛礁间关键造礁生物的物种多样性、遗传多样性与系统发育多样性, 负责人, 国家任务, 2022-09--2026-12
（ 2 ） 深海甲壳动物的基因组图谱构建与环境适应机制解析, 负责人, 地方任务, 2022-10--2025-09

（1）Adaptation to the deep-sea hydrothermal vents and cold seeps: insights from the transcriptome and lysine acetylome of Alvinocaris longirostris in both environments   2018-09-09
（2）基于比较转录组对长角阿尔文虾（Alvinocaris longirostris）适应深海热液环境的分子机制研究   中国甲壳动物学会第十四次学术研讨会   2017-10-13
（3）Molecular basis of adaptation to the deep sea hydrothermal vents and cold seeps: insights from transcriptome comparison of Alvinocaris longirostris in both environments   2017-07-23
（4）High density linkage mapping aided by transcriptomics documents ZW sex determination system in the Chinese mitten crab Eriocheir sinensis   2014-10-11
（5）Comparison of microsatellite and mitochondrial DNA markers in detecting genetic structure and connectivity in the boring giant clams, Tridacna crocea, across the Indo-Malay Archipelago   2012-10-19
（6）Comparative genetic population structure and connectivity of giant clams (Tridacnidae) in the Indo-Pacific   2010-12-13
（7）Genetic population structure of the giant clam (Tridacna squamosa)   2009-09-14

现指导学生

迟豪君  硕士研究生  086000-生物与医药