基本信息
杨超  男  硕导  中国科学院上海免疫与感染研究所
电子邮件: cyang@ips.ac.cn
通信地址: 上海市徐汇区岳阳路320号
邮政编码:

招生信息

   
招生专业
071005-微生物学
0710J3-生物信息学
100103-病原生物学
招生方向
微生物进化
微生物致病机制
微生物基因组流行病学

教育背景

2016-09--2019-06   军事科学院军事医学研究院   博士
2013-09--2015-06   中国海洋大学   硕士
2009-09--2013-06   中国海洋大学   本科

工作经历

   
工作简历
2021-10~现在, 中国科学院上海巴斯德研究所, 副研究员
2019-07~2021-10,深圳市疾病预防控制中心和南方医科大学, 博士后

专利与奖励

   
奖励信息
(1) 上海市“科技创新行动计划”启明星, 省级, 2023
(2) 中国科学院上海巴斯德所“青年巴斯德人才”, , 研究所(学校), 2023
(3) 中国科学院青年创新促进会会员, 院级, 2020

出版信息

   
发表论文
[1] Jiang, Min, Yang, Chao, Kwan, Patrick S L, Zhang, Liping, Fan, Hang, Jin, Yujuan, Sun, Lifang, Chen, Hongyu, Li, Baisheng, Chen, Qiuxia, Wu, Yarong, Guo, Yan, Shi, Yuanguo, Liao, Min, Shi, Xiaolu, Liu, Jianping, Jiang, Lijuan, Cai, Rui, Deng, Yinhua, Sun, Qun, Yang, Ruifu, Zhang, Qiaoli, Cui, Yujun, Hu, Qinghua. Rapid Multilateral and Integrated Public Health Response to a Cross-City Outbreak of Salmonella Enteritidis Infections Combining Analytical, Molecular, and Genomic Epidemiological Analysis. FRONTIERS IN MICROBIOLOGY[J]. 2022, 第 2 作者13: http://dx.doi.org/10.3389/fmicb.2022.772489.
[2] YuxiaoChang, XiangLi, LeiDing, ChaoYang, ZhiyuanPan, NiHan, YujunCui, FachaoZhi, RuifuYang, HongGao, YujingBi. Genetic and Functional Differences ofEscherichia coliStrains from Colorectal Cancer Mucosal Tissues. Engineering[J]. 2022, 第 4 作者16(9): 210-219, https://journal.hep.com.cn/engi/EN/10.1016/j.eng.2021.03.028.
[3] Yang, Chao, Li, Yinghui, Jiang, Min, Wang, Lei, Jiang, Yixiang, Hu, Lulu, Shi, Xiaolu, He, Lianhua, Cai, Rui, Wu, Shuang, Qiu, Yaqun, Lu, Linying, Zuo, Le, Chen, Qiongcheng, Wu, Yarong, MartinezUrtaza, Jaime, Wan, Chengsong, Yang, Ruifu, Cui, Yujun, Hu, Qinghua. Outbreak dynamics of foodborne pathogen Vibrio parahaemolyticus over a seventeen year period implies hidden reservoirs. NATURE MICROBIOLOGY[J]. 2022, 第 1 作者7(8): 1221-+, http://dx.doi.org/10.1038/s41564-022-01182-0.
[4] Yang, Chao, Li, Yinghui, Zuo, Le, Jiang, Min, Zhang, Xianglilan, Xie, Li, Luo, Miaomiao, She, Yiying, Wang, Lei, Jiang, Yixiang, Wu, Shuang, Cai, Rui, Shi, Xiaolu, Cui, Yujun, Wan, Chengsong, Hu, Qinghua. Genomic Epidemiology and Antimicrobial Susceptibility Profile of Enterotoxigenic Escherichia coli From Outpatients With Diarrhea in Shenzhen, China, 2015-2020. FRONTIERS IN MICROBIOLOGY[J]. 2021, 第 1 作者12: http://dx.doi.org/10.3389/fmicb.2021.732068.
[5] Xiao, Yue, Yang, Chao, Yu, Leilei, Tian, Fengwei, Wu, Yarong, Zhao, Jianxin, Zhang, Hao, Yang, Ruifu, Chen, Wei, Hill, Colin, Cui, Yujun, Zhai, Qixiao. Human gut-derived B. longum subsp. longum strains protect against aging in a D-galactose-induced aging mouse model. MICROBIOME[J]. 2021, 第 2 作者9(1): http://dx.doi.org/10.1186/s40168-021-01108-8.
[6] Jiang, Min, Zhu, Feng, Yang, Chao, Deng, Yinhua, Kwan, Patrick S L, Li, Yinghui, Lin, Yiman, Qiu, Yaqun, Shi, Xiaolu, Chen, Hui, Cui, Yujun, Hu, Qinghua. Whole-Genome Analysis of Salmonella enterica Serovar Enteritidis Isolates in Outbreak Linked to Online Food Delivery, Shenzhen, China, 2018. EMERGING INFECTIOUS DISEASES[J]. 2020, 第 3 作者26(4): 789-792, https://doaj.org/article/ad5afdf952ed4c61ab69ae0f0fdb2558.
[7] Wang, Haoqiu, Yang, Chao, Sun, Zhou, Zheng, Wei, Zhang, Wei, Yu, Hua, Wu, Yarong, Didelot, Xavier, Yang, Ruifu, Pan, Jingcao, Cui, Yujun. Genomic epidemiology of Vibrio cholerae reveals the regional and global spread of two epidemic non-toxigenic lineages. PLOS NEGLECTED TROPICAL DISEASES[J]. 2020, 第 2 作者  通讯作者  14(2): https://doaj.org/article/f9bb9f4b079f45ca89764170bc0d24ff.
[8] Yang, Chao, Jiang, Min, Wang, Xiaohui, Tang, Xiujuan, Fang, Shisong, Li, Hao, Zuo, Le, Jiang, Yixiang, Zhong, Yifan, Chen, Qiongcheng, Zheng, Chenli, Wang, Lei, Wu, Shuang, Wu, Weihua, Liu, Hui, Yuan, Jing, Liao, Xuejiao, Zhang, Zhen, Shi, Xiaolu, Geng, Yijie, Zhang, Huan, Zheng, Huanying, Wan, Min, Lu, Linying, Ren, Xiaohu, Cui, Yujun, Zou, Xuan, Feng, Tiejian, Xia, Junjie, Yang, Ruifu, Liu, Yingxia, Mei, Shujiang, Li, Baisheng, Yang, Zhengrong, Hu, Qinghua. Viral RNA level, serum antibody responses, and transmission risk in recovered COVID-19 patients with recurrent positive SARS-CoV-2 RNA test results: a population-based observational cohort study. EMERGING MICROBES & INFECTIONS[J]. 2020, 第 1 作者9(1): 2368-2378, http://dx.doi.org/10.1080/22221751.2020.1837018.
[9] Cui, Yujun, Yang, Chao, Qiu, Hongling, Wang, Hui, Yang, Ruifu, Falush, Daniel. The landscape of coadaptation in Vibrio parahaemolyticus. ELIFE[J]. 2020, 第 2 作者9: 
[10] Yang, Chao, Pei, Xiaoyan, Wu, Yarong, Yan, Lin, Yan, Yanfeng, Song, Yuqin, Coyle, Nicola M, MartinezUrtaza, Jaime, Quince, Christopher, Hu, Qinghua, Jiang, Min, Feil, Edward, Yang, Dajin, Song, Yajun, Zhou, Dongsheng, Yang, Ruifu, Falush, Daniel, Cui, Yujun. Recent mixing of Vibrio parahaemolyticus populations. ISME JOURNAL[J]. 2019, 第 1 作者13(10): 2578-2588, http://dx.doi.org/10.1038/s41396-019-0461-5.
[11] Yang, Chao, Zhang, Xianglilan, Fan, Hang, Li, Yinghui, Hu, Qinghua, Yang, Ruifu, Cui, Yujun. Genetic diversity, virulence factors and farm-to-table spread pattern of Vibrio parahaemolyticus food-associated isolates. FOOD MICROBIOLOGY[J]. 2019, 第 1 作者84: 103270, http://dx.doi.org/10.1016/j.fm.2019.103270.

科研活动

   
科研项目
( 1 ) 副溶血弧菌多位点上位相互作用进化研究, 负责人, 国家任务, 2023-01--2026-12
( 2 ) 解析肠杆菌/艰难梭菌等继发感染重要菌株起源、遗传学特征和入侵机制, 参与, 国家任务, 2022-12--2025-11
( 3 ) 副溶血弧菌大流行群起源进化和致病机制研究, 负责人, 地方任务, 2023-04--2026-03
( 4 ) 基于三代纳米孔测序的现场、实时、 “菌株水平”病原检测技术平台, 负责人, 研究所自选, 2023-06--2024-05