主要聚焦于基因功能及其调控网络的多层级解析，综合运用计算蛋白质组学、蛋白质基因组学及表观转录组学等多组学技术，并结合相关实验技术体系，从蛋白质与RNA修饰调控层面系统解析基因表达与功能实现机制

   

蛋白质翻译后修饰，定量蛋白质组学，蛋白质基因组学

   

蛋白质翻译后修饰，定量蛋白质组学，蛋白质基因组学

2017-09--2020-12   福建农林大学   生物化学与分子生物学，博士研究生
2008-09--2011-06   中国农科院研究生物技术研究所   生物化学与分子生物学，硕士研究生
2004-09--2008-06   海南师范大学   生物技术，学士

2017-09--2020-12   福建农林大学   生物化学与分子生物学，博士研究生
2008-09--2011-06   中国农科院研究生物技术研究所   生物化学与分子生物学，硕士研究生
2004-09--2008-06   海南师范大学   生物技术，学士

   

2017-01~现在, 中国科学院水生生物研究所, 高级实验师
2013-11~2016-12,中国科学院水生生物研究所, 实验师
2011-07~2013-10,中国科学院水生生物研究所, 助理实验师

2017-01~现在, 中国科学院水生生物研究所, 高级实验师
2013-11~2016-12,中国科学院水生生物研究所, 实验师
2011-07~2013-10,中国科学院水生生物研究所, 助理实验师

   

2017-01~现在, 中国科学院水生生物研究所, 高级实验师
2013-11~2016-12,中国科学院水生生物研究所, 实验师
2011-07~2013-10,中国科学院水生生物研究所, 助理实验师

2017-01~现在, 中国科学院水生生物研究所, 高级实验师
2013-11~2016-12,中国科学院水生生物研究所, 实验师
2011-07~2013-10,中国科学院水生生物研究所, 助理实验师

   

（1） 湖北省自然科学, 二等奖, 省级, 2019

[1] 葛峰, 杨明坤, 张珈, 洪斌. 一种快速分析真核生物蛋白质基因组学数据的方法. CN: CN108920898A, 2018-11-30.

[2] 杨明坤, 张珈, 葛峰, 熊倩, 莫然, 王炎. 一种基于串联质谱鉴定蛋白质乙酰化修饰位点的方法. CN: CN103646190A, 2014-03-19.

[3] 张珈, 杨明坤, 葛峰, 熊倩, 郑鹏, 李重阳. 一种基于串联质谱鉴定蛋白质磷酸化修饰位点的方法. CN: CN103268432A, 2013-08-28.

（1） 湖北省自然科学, 二等奖, 省级, 2019

[1] 葛峰, 杨明坤, 张珈, 洪斌. 一种快速分析真核生物蛋白质基因组学数据的方法. CN: CN108920898A, 2018-11-30.

[2] 杨明坤, 张珈, 葛峰, 熊倩, 莫然, 王炎. 一种基于串联质谱鉴定蛋白质乙酰化修饰位点的方法. CN: CN103646190A, 2014-03-19.

[3] 张珈, 杨明坤, 葛峰, 熊倩, 郑鹏, 李重阳. 一种基于串联质谱鉴定蛋白质磷酸化修饰位点的方法. CN: CN103268432A, 2013-08-28.

   

（1） 湖北省自然科学, 二等奖, 省级, 2019

[1] 葛峰, 杨明坤, 张珈, 洪斌. 一种快速分析真核生物蛋白质基因组学数据的方法. CN: CN108920898A, 2018-11-30.

[2] 杨明坤, 张珈, 葛峰, 熊倩, 莫然, 王炎. 一种基于串联质谱鉴定蛋白质乙酰化修饰位点的方法. CN: CN103646190A, 2014-03-19.

[3] 张珈, 杨明坤, 葛峰, 熊倩, 郑鹏, 李重阳. 一种基于串联质谱鉴定蛋白质磷酸化修饰位点的方法. CN: CN103268432A, 2013-08-28.

（1） 湖北省自然科学, 二等奖, 省级, 2019

[1] 葛峰, 杨明坤, 张珈, 洪斌. 一种快速分析真核生物蛋白质基因组学数据的方法. CN: CN108920898A, 2018-11-30.

[2] 杨明坤, 张珈, 葛峰, 熊倩, 莫然, 王炎. 一种基于串联质谱鉴定蛋白质乙酰化修饰位点的方法. CN: CN103646190A, 2014-03-19.

[3] 张珈, 杨明坤, 葛峰, 熊倩, 郑鹏, 李重阳. 一种基于串联质谱鉴定蛋白质磷酸化修饰位点的方法. CN: CN103268432A, 2013-08-28.

   

（1） Small RNA ASpks2 promotes Mycobacterium tuberculosis survival in macrophages via targeting polyketide synthase 2, J. Biol. Chem., 2026, 第 5 作者  通讯作者
（2） Lysine methyltransferase Sll0171 modulates motility through PilA1 methylation in Synechocystis sp. PCC 6803, Plant Physiology, 2026, 第 5 作者  通讯作者
（3） Global discovery of RNA modifications and functional analysis of m5C methylome in cyanobacteria, JOURNAL OF BIOLOGICAL CHEMISTRY, 2026, 第 6 作者  通讯作者
（4） cKAT acetylation of the CO2 hydration protein ChpX regulates the CO2 concentrating mechanism in cyanobacteria, Plant Physiology, 2026, 第 8 作者  通讯作者
（5） Lysine acetylation in cyanobacteria: emerging mechanisms and functions, BIOCHEMICAL SOCIETY TRANSACTIONS, 2025, 第 2 作者
（6） Decoding the Nature of the Peritrich Stalk: A Distinctive Organelle in a Large Group of Ciliated Unicellular Eukaryotes, JOURNAL OF EUKARYOTIC MICROBIOLOGY, 2025, 第 12 作者
（7） Functional characterization of the plastidial enzyme GPAT in microalgae and its potential role in lipid biosynthesis, PLANT PHYSIOLOGY, 2025, 第 7 作者
（8） The role of CddA and cGNAT2 in crotonylation of proteins in cyanobacteria, NEW PHYTOLOGIST, 2025, 第 6 作者  通讯作者
（9） Interactome Analysis of ClpX Reveals Its Regulatory Role in Metabolism and Photosynthesis in Cyanobacteria, JOURNAL OF PROTEOME RESEARCH, 2024, 第 7 作者  通讯作者
（10） Identification and Functional Analysis of Lysine 2-Hydroxyisobutyrylation in Cyanobacteria, JOURNAL OF PROTEOME RESEARCH, 2024, 第 8 作者  通讯作者
（11） Deciphering the structure, function, and mechanism of lysine acetyltransferase cGNAT2 in cyanobacteria, PLANT PHYSIOLOGY, 2024, 第 2 作者
（12） Improving the genome and proteome annotations of the marine model diatom Thalassiosira pseudonana using a proteogenomics strategy, Improving the genome and proteome annotations of the marine model diatom Thalassiosira pseudonana using a proteogenomics strategy, MARINE LIFE SCIENCE & TECHNOLOGY, 2023, 第 2 作者
（13） iGDP: an integrated Genome Decontamination Pipeline for wild ciliated microeukaryotes, Molecular Ecology Resources, 2023, 
（14） ClpP2蛋白失活对集胞藻PCC6803生长、光合作用和蛋白质组的影响, Effects of ClpP2 protein inactivation on growth, photosynthesis, and proteome of Synechocystis sp. PCC6803, 微生物学通报, 2023, 第 4 作者
（15） cKMT1 is a New Lysine Methyltransferase That Methylates the Ferredoxin-NADP(+) Oxidoreductase and Regulates Energy Transfer in Cyanobacteria, MOLECULAR & CELLULAR PROTEOMICS, 2023, 第 11 作者  通讯作者
（16） Giant proteins in a giant cell: Molecular basis of ultrafast Ca2+-dependent cell contraction, SCIENCE ADVANCES, 2023, 第 6 作者
（17） Systematic Survey of the Regulatory Networks of the Long Noncoding RNA BANCR in Cervical Cancer Cells br, JOURNAL OF PROTEOME RESEARCH, 2022, 第 5 作者  通讯作者
（18） Polarization of Tumor-Associated Macrophages Promoted by Vitamin C-Loaded Liposomes for Cancer Immunotherapy, ACS NANO, 2022, 第 2 作者
（19） Systematic Survey of the Regulatory Networks of the Long Noncoding RNA BANCR in Cervical Cancer Cells, JOURNAL OF PROTEOME RESEARCH, 2022, 第 5 作者  通讯作者
（20） Proteomic analysis of the regulatory networks of ClpX in a model cyanobacterium Synechocystis sp. PCC 6803, FRONTIERS IN PLANT SCIENCE, 2022, 第 6 作者  通讯作者
（21） Ras subfamily GTPases regulate development, aflatoxin biosynthesis and pathogenicity in the fungus Aspergillus flavus, ENVIRONMENTAL MICROBIOLOGY, 2021, 第 3 作者
（22） Quantitative Proteomics Reveals the Protein Regulatory Network of Anabaena sp. PCC 7120 under Nitrogen Deficiency, JOURNAL OF PROTEOME RESEARCH, 2021, 第 4 作者  通讯作者
（23） Proteogenomic Analysis Provides Novel Insight into Genome Annotation and Nitrogen Metabolism in Nostoc sp. PCC 7120, MICROBIOLOGY SPECTRUM, 2021, 第 2 作者
（24） Proteogenomic Characterization of the Pathogenic Fungus Aspergillus flavus Reveals Novel Genes Involved in Aflatoxin Production, MOLECULAR & CELLULAR PROTEOMICS, 2021, 第 1 作者
（25） A novel phosphoinositide kinase Fab1 regulates biosynthesis of pathogenic aflatoxin in Aspergillus flavus, VIRULENCE, 2021, 第 1 作者
（26） Ras subfamily GTPases regulate development, aflatoxin biosynthesis and pathogenicity in the fungus Aspergillus flavus, ENVIRONMENTAL MICROBIOLOGY, 2021, 第 3 作者
（27） Proteogenomic Characterization of the Pathogenic Fungus Aspergillus flavus Reveals Novel Genes Involved in Aflatoxin Production, MOLECULAR & CELLULAR PROTEOMICS, 2021, 第 1 作者
（28） Quantitative Proteomics Reveals the Protein Regulatory Network of Anabaena sp. PCC 7120 under Nitrogen Deficiency, JOURNAL OF PROTEOME RESEARCH, 2021, 第 4 作者  通讯作者
（29） Characterization of Lysine Monomethylome and Methyltransferase in Model Cyanobacterium Synechocystis sp. PCC 6803, GENOMICS PROTEOMICS & BIOINFORMATICS, 2020, 第 2 作者
（30） Antioxidant-related catalase CTA1 regulates development, aflatoxin biosynthesis, and virulence in pathogenic fungus Aspergillus flavus, ENVIRONMENTAL MICROBIOLOGY, 2020, 第 2 作者
（31） Characterization of Lysine Monomethylome and Methyltransferase in Model Cyanobacterium Synechocystis sp.PCC 6803, Characterization of Lysine Monomethylome and Methyltransferase in Model Cyanobacterium Synechocystis sp. PCC 6803, GENOMICS PROTEOMICS & BIOINFORMATICS, 2020, 第 2 作者
（32） Antioxidant-related catalase CTA1 regulates development, aflatoxin biosynthesis, and virulence in pathogenic fungus Aspergillus flavus, ENVIRONMENTAL MICROBIOLOGY, 2020, 第 2 作者
（33） Structural and Functional Insights into a Lysine Deacylase in the Cyanobacterium Synechococcus sp. PCC 7002, PLANT PHYSIOLOGY, 2020, 第 2 作者
（34） Lysine Propionylation is a Widespread Post-Translational Modification Involved in Regulation of Photosynthesis and Metabolism in Cyanobacteria, INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2019, 第 1 作者
（35） Lysine acetylation contributes to development, aflatoxin biosynthesis and pathogenicity in Aspergillus flavus, ENVIRONMENTAL MICROBIOLOGY, 2019, 第 4 作者
（36） E6 Protein Expressed by High-Risk HPV Activates Super-Enhancers of the EGFR and c-MET Oncogenes by Destabilizing the Histone, CANCER RESEARCH, 2018, 第 7 作者
（37） Lysine Succinylation Contributes to Aflatoxin Production and Pathogenicity in Aspergillus flavus, MOLECULAR & CELLULAR PROTEOMICS, 2018, 第 2 作者
（38） Effects of PSII Manganese-Stabilizing Protein Succinylation on Photosynthesis in the Model Cyanobacterium Synechococcus sp PCC 7002, PLANT AND CELL PHYSIOLOGY, 2018, 第 2 作者
（39） Genome Annotation of a Model Diatom Phaeodactylum tricornutum Using an Integrated Proteogenomic Pipeline, MOLECULAR PLANT, 2018, 第 1 作者
（40） Systematic Identification of Mycobacterium tuberculosis Effectors Reveals that BfrB Suppresses Innate Immunity, MOLECULAR & CELLULAR PROTEOMICS, 2017, 第 10 作者
（41） Systematic Identification of Mycobacterium tuberculosis Effectors Reveals that BfrB Suppresses Innate Immunity, MOLECULAR & CELLULAR PROTEOMICS, 2017, 第 10 作者
（42） Lysine acetylation regulates the activity of Escherichia coli pyridoxine 5’-phosphate oxidase., Acta Biochimica et Biophysica Sinica, 2017, 第 5 作者
（43） Malonylome Analysis Reveals the Involvement of Lysine Malonylation in Metabolism and Photosynthesis in Cyanobacteria, JOURNAL OF PROTEOME RESEARCH, 2017, 第 2 作者
（44） Lysine acetylation regulates the activity of Escherichia coil pyridoxine 5＇-phosphate oxidase, Lysine acetylation regulates the activity of Escherichia coil pyridoxine 5＇-phosphate oxidase, 生物化学与生物物理学报：英文版, 2017, 第 5 作者
（45） Lysine Acetylome Analysis Reveals Photosystem II Manganese-stabilizing Protein Acetylation is Involved in Negative Regulation of Oxygen Evolution in Model Cyanobacterium Synechococcus sp PCC 7002, MOLECULARCELLULARPROTEOMICS, 2017, 第 3 作者
（46） 蓝藻的蛋白质翻译后修饰研究进展, PROGRESS ON PROTEIN POST-TRANSLATIONAL MODIFICATION IN CYANOBACTERIA, 水生生物学报, 2016, 第 1 作者
（47） GAPP: A Proteogenomic Software for Genome Annotation and Global Profiling of Post-translational Modifications in Prokaryotes, MOLECULAR & CELLULAR PROTEOMICS, 2016, 第 2 作者
（48） Global Phosphoproteomic Analysis Reveals the Involvement of Phosphorylation in Aflatoxins Biosynthesis in the Pathogenic Fungus Aspergillus flavus, SCIENTIFIC REPORTS, 2016, 第 2 作者
（49） Succinylome Analysis Reveals the Involvement of Lysine Succinylation in Metabolism in Pathogenic Mycobacterium tuberculosis, MOLECULAR & CELLULAR PROTEOMICS, 2015, 第 1 作者
（50） Systematic identification of arsenic-binding proteins reveals that hexokinase-2 is inhibited by arsenic, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2015, 第 9 作者
（51） Effects of Phosphorylation of beta Subunits of Phycocyanins on State Transition in the Model Cyanobacterium Synechocystis sp PCC 6803, PLANT AND CELL PHYSIOLOGY, 2015, 第 4 作者
（52） Unique diversity of the venom peptides from the scorpion Androctonus bicolor revealed by transcriptomic and proteomic analysis, JOURNAL OF PROTEOMICS, 2015, 第 5 作者
（53） Acetylome Analysis Reveals the Involvement of Lysine Acetylation in Photosynthesis and Carbon Metabolism in the Model Cyanobacterium Synechocystis sp PCC 6803, JOURNAL OF PROTEOME RESEARCH, 2015, 第 2 作者
（54） Analysis of phosphoproteome in rice pistil, PROTEOMICS, 2014, 第 5 作者
（55） Proteogenomic analysis and global discovery of posttranslational modifications in prokaryotes., PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2014, 第 1 作者
（56） Acetylome Analysis Reveals Diverse Functions of Lysine Acetylation in Mycobacterium tuberculosis, MOLECULAR & CELLULAR PROTEOMICS, 2014, 第 2 作者
（57） Phosphoproteomic Analysis Provides Novel Insights into Stress Responses in Phaeodactylum tricornutum, a Model Diatom, JOURNAL OF PROTEOME RESEARCH, 2014, 第 2 作者
（58） Global Phosphoproteomic Analysis Reveals Diverse Functions of Serine/Threonine/Tyrosine Phosphorylation in the Model Cyanobacterium Synechococcus sp Strain PCC 7002, JOURNAL OF PROTEOME RESEARCH, 2013, 第 1 作者
（59） Identification of Novel miR-21 Target Proteins in Multiple Myeloma Cells by Quantitative Proteomics, JOURNAL OF PROTEOME RESEARCH, 2012, 第 4 作者
（60） QUICK identification and SPR validation of signal transducers and activators of transcription 3 (Stat3) interacting proteins, JOURNAL OF PROTEOMICS, 2012, 第 4 作者
（61） 14-3-3 zeta Interacts with Stat3 and Regulates Its Constitutive Activation in Multiple Myeloma Cells, PLOS ONE, 2012, 第 5 作者

（1） Small RNA ASpks2 promotes Mycobacterium tuberculosis survival in macrophages via targeting polyketide synthase 2, J. Biol. Chem., 2026, 第 5 作者  通讯作者
（2） Lysine methyltransferase Sll0171 modulates motility through PilA1 methylation in Synechocystis sp. PCC 6803, Plant Physiology, 2026, 第 5 作者  通讯作者
（3） Global discovery of RNA modifications and functional analysis of m5C methylome in cyanobacteria, JOURNAL OF BIOLOGICAL CHEMISTRY, 2026, 第 6 作者  通讯作者
（4） cKAT acetylation of the CO2 hydration protein ChpX regulates the CO2 concentrating mechanism in cyanobacteria, Plant Physiology, 2026, 第 8 作者  通讯作者
（5） Lysine acetylation in cyanobacteria: emerging mechanisms and functions, BIOCHEMICAL SOCIETY TRANSACTIONS, 2025, 第 2 作者
（6） Decoding the Nature of the Peritrich Stalk: A Distinctive Organelle in a Large Group of Ciliated Unicellular Eukaryotes, JOURNAL OF EUKARYOTIC MICROBIOLOGY, 2025, 第 12 作者
（7） Functional characterization of the plastidial enzyme GPAT in microalgae and its potential role in lipid biosynthesis, PLANT PHYSIOLOGY, 2025, 第 7 作者
（8） The role of CddA and cGNAT2 in crotonylation of proteins in cyanobacteria, NEW PHYTOLOGIST, 2025, 第 6 作者  通讯作者
（9） Interactome Analysis of ClpX Reveals Its Regulatory Role in Metabolism and Photosynthesis in Cyanobacteria, JOURNAL OF PROTEOME RESEARCH, 2024, 第 7 作者  通讯作者
（10） Identification and Functional Analysis of Lysine 2-Hydroxyisobutyrylation in Cyanobacteria, JOURNAL OF PROTEOME RESEARCH, 2024, 第 8 作者  通讯作者
（11） Deciphering the structure, function, and mechanism of lysine acetyltransferase cGNAT2 in cyanobacteria, PLANT PHYSIOLOGY, 2024, 第 2 作者
（12） Improving the genome and proteome annotations of the marine model diatom Thalassiosira pseudonana using a proteogenomics strategy, Improving the genome and proteome annotations of the marine model diatom Thalassiosira pseudonana using a proteogenomics strategy, MARINE LIFE SCIENCE & TECHNOLOGY, 2023, 第 2 作者
（13） iGDP: an integrated Genome Decontamination Pipeline for wild ciliated microeukaryotes, Molecular Ecology Resources, 2023, 
（14） ClpP2蛋白失活对集胞藻PCC6803生长、光合作用和蛋白质组的影响, Effects of ClpP2 protein inactivation on growth, photosynthesis, and proteome of Synechocystis sp. PCC6803, 微生物学通报, 2023, 第 4 作者
（15） cKMT1 is a New Lysine Methyltransferase That Methylates the Ferredoxin-NADP(+) Oxidoreductase and Regulates Energy Transfer in Cyanobacteria, MOLECULAR & CELLULAR PROTEOMICS, 2023, 第 11 作者  通讯作者
（16） Giant proteins in a giant cell: Molecular basis of ultrafast Ca2+-dependent cell contraction, SCIENCE ADVANCES, 2023, 第 6 作者
（17） Systematic Survey of the Regulatory Networks of the Long Noncoding RNA BANCR in Cervical Cancer Cells br, JOURNAL OF PROTEOME RESEARCH, 2022, 第 5 作者  通讯作者
（18） Polarization of Tumor-Associated Macrophages Promoted by Vitamin C-Loaded Liposomes for Cancer Immunotherapy, ACS NANO, 2022, 第 2 作者
（19） Systematic Survey of the Regulatory Networks of the Long Noncoding RNA BANCR in Cervical Cancer Cells, JOURNAL OF PROTEOME RESEARCH, 2022, 第 5 作者  通讯作者
（20） Proteomic analysis of the regulatory networks of ClpX in a model cyanobacterium Synechocystis sp. PCC 6803, FRONTIERS IN PLANT SCIENCE, 2022, 第 6 作者  通讯作者
（21） Ras subfamily GTPases regulate development, aflatoxin biosynthesis and pathogenicity in the fungus Aspergillus flavus, ENVIRONMENTAL MICROBIOLOGY, 2021, 第 3 作者
（22） Quantitative Proteomics Reveals the Protein Regulatory Network of Anabaena sp. PCC 7120 under Nitrogen Deficiency, JOURNAL OF PROTEOME RESEARCH, 2021, 第 4 作者  通讯作者
（23） Proteogenomic Analysis Provides Novel Insight into Genome Annotation and Nitrogen Metabolism in Nostoc sp. PCC 7120, MICROBIOLOGY SPECTRUM, 2021, 第 2 作者
（24） Proteogenomic Characterization of the Pathogenic Fungus Aspergillus flavus Reveals Novel Genes Involved in Aflatoxin Production, MOLECULAR & CELLULAR PROTEOMICS, 2021, 第 1 作者
（25） A novel phosphoinositide kinase Fab1 regulates biosynthesis of pathogenic aflatoxin in Aspergillus flavus, VIRULENCE, 2021, 第 1 作者
（26） Ras subfamily GTPases regulate development, aflatoxin biosynthesis and pathogenicity in the fungus Aspergillus flavus, ENVIRONMENTAL MICROBIOLOGY, 2021, 第 3 作者
（27） Proteogenomic Characterization of the Pathogenic Fungus Aspergillus flavus Reveals Novel Genes Involved in Aflatoxin Production, MOLECULAR & CELLULAR PROTEOMICS, 2021, 第 1 作者
（28） Quantitative Proteomics Reveals the Protein Regulatory Network of Anabaena sp. PCC 7120 under Nitrogen Deficiency, JOURNAL OF PROTEOME RESEARCH, 2021, 第 4 作者  通讯作者
（29） Characterization of Lysine Monomethylome and Methyltransferase in Model Cyanobacterium Synechocystis sp. PCC 6803, GENOMICS PROTEOMICS & BIOINFORMATICS, 2020, 第 2 作者
（30） Antioxidant-related catalase CTA1 regulates development, aflatoxin biosynthesis, and virulence in pathogenic fungus Aspergillus flavus, ENVIRONMENTAL MICROBIOLOGY, 2020, 第 2 作者
（31） Characterization of Lysine Monomethylome and Methyltransferase in Model Cyanobacterium Synechocystis sp.PCC 6803, Characterization of Lysine Monomethylome and Methyltransferase in Model Cyanobacterium Synechocystis sp. PCC 6803, GENOMICS PROTEOMICS & BIOINFORMATICS, 2020, 第 2 作者
（32） Antioxidant-related catalase CTA1 regulates development, aflatoxin biosynthesis, and virulence in pathogenic fungus Aspergillus flavus, ENVIRONMENTAL MICROBIOLOGY, 2020, 第 2 作者
（33） Structural and Functional Insights into a Lysine Deacylase in the Cyanobacterium Synechococcus sp. PCC 7002, PLANT PHYSIOLOGY, 2020, 第 2 作者
（34） Lysine Propionylation is a Widespread Post-Translational Modification Involved in Regulation of Photosynthesis and Metabolism in Cyanobacteria, INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2019, 第 1 作者
（35） Lysine acetylation contributes to development, aflatoxin biosynthesis and pathogenicity in Aspergillus flavus, ENVIRONMENTAL MICROBIOLOGY, 2019, 第 4 作者
（36） E6 Protein Expressed by High-Risk HPV Activates Super-Enhancers of the EGFR and c-MET Oncogenes by Destabilizing the Histone, CANCER RESEARCH, 2018, 第 7 作者
（37） Lysine Succinylation Contributes to Aflatoxin Production and Pathogenicity in Aspergillus flavus, MOLECULAR & CELLULAR PROTEOMICS, 2018, 第 2 作者
（38） Effects of PSII Manganese-Stabilizing Protein Succinylation on Photosynthesis in the Model Cyanobacterium Synechococcus sp PCC 7002, PLANT AND CELL PHYSIOLOGY, 2018, 第 2 作者
（39） Genome Annotation of a Model Diatom Phaeodactylum tricornutum Using an Integrated Proteogenomic Pipeline, MOLECULAR PLANT, 2018, 第 1 作者
（40） Systematic Identification of Mycobacterium tuberculosis Effectors Reveals that BfrB Suppresses Innate Immunity, MOLECULAR & CELLULAR PROTEOMICS, 2017, 第 10 作者
（41） Systematic Identification of Mycobacterium tuberculosis Effectors Reveals that BfrB Suppresses Innate Immunity, MOLECULAR & CELLULAR PROTEOMICS, 2017, 第 10 作者
（42） Lysine acetylation regulates the activity of Escherichia coli pyridoxine 5’-phosphate oxidase., Acta Biochimica et Biophysica Sinica, 2017, 第 5 作者
（43） Malonylome Analysis Reveals the Involvement of Lysine Malonylation in Metabolism and Photosynthesis in Cyanobacteria, JOURNAL OF PROTEOME RESEARCH, 2017, 第 2 作者
（44） Lysine acetylation regulates the activity of Escherichia coil pyridoxine 5＇-phosphate oxidase, Lysine acetylation regulates the activity of Escherichia coil pyridoxine 5＇-phosphate oxidase, 生物化学与生物物理学报：英文版, 2017, 第 5 作者
（45） Lysine Acetylome Analysis Reveals Photosystem II Manganese-stabilizing Protein Acetylation is Involved in Negative Regulation of Oxygen Evolution in Model Cyanobacterium Synechococcus sp PCC 7002, MOLECULARCELLULARPROTEOMICS, 2017, 第 3 作者
（46） 蓝藻的蛋白质翻译后修饰研究进展, PROGRESS ON PROTEIN POST-TRANSLATIONAL MODIFICATION IN CYANOBACTERIA, 水生生物学报, 2016, 第 1 作者
（47） GAPP: A Proteogenomic Software for Genome Annotation and Global Profiling of Post-translational Modifications in Prokaryotes, MOLECULAR & CELLULAR PROTEOMICS, 2016, 第 2 作者
（48） Global Phosphoproteomic Analysis Reveals the Involvement of Phosphorylation in Aflatoxins Biosynthesis in the Pathogenic Fungus Aspergillus flavus, SCIENTIFIC REPORTS, 2016, 第 2 作者
（49） Succinylome Analysis Reveals the Involvement of Lysine Succinylation in Metabolism in Pathogenic Mycobacterium tuberculosis, MOLECULAR & CELLULAR PROTEOMICS, 2015, 第 1 作者
（50） Systematic identification of arsenic-binding proteins reveals that hexokinase-2 is inhibited by arsenic, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2015, 第 9 作者
（51） Effects of Phosphorylation of beta Subunits of Phycocyanins on State Transition in the Model Cyanobacterium Synechocystis sp PCC 6803, PLANT AND CELL PHYSIOLOGY, 2015, 第 4 作者
（52） Unique diversity of the venom peptides from the scorpion Androctonus bicolor revealed by transcriptomic and proteomic analysis, JOURNAL OF PROTEOMICS, 2015, 第 5 作者
（53） Acetylome Analysis Reveals the Involvement of Lysine Acetylation in Photosynthesis and Carbon Metabolism in the Model Cyanobacterium Synechocystis sp PCC 6803, JOURNAL OF PROTEOME RESEARCH, 2015, 第 2 作者
（54） Analysis of phosphoproteome in rice pistil, PROTEOMICS, 2014, 第 5 作者
（55） Proteogenomic analysis and global discovery of posttranslational modifications in prokaryotes., PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2014, 第 1 作者
（56） Acetylome Analysis Reveals Diverse Functions of Lysine Acetylation in Mycobacterium tuberculosis, MOLECULAR & CELLULAR PROTEOMICS, 2014, 第 2 作者
（57） Phosphoproteomic Analysis Provides Novel Insights into Stress Responses in Phaeodactylum tricornutum, a Model Diatom, JOURNAL OF PROTEOME RESEARCH, 2014, 第 2 作者
（58） Global Phosphoproteomic Analysis Reveals Diverse Functions of Serine/Threonine/Tyrosine Phosphorylation in the Model Cyanobacterium Synechococcus sp Strain PCC 7002, JOURNAL OF PROTEOME RESEARCH, 2013, 第 1 作者
（59） Identification of Novel miR-21 Target Proteins in Multiple Myeloma Cells by Quantitative Proteomics, JOURNAL OF PROTEOME RESEARCH, 2012, 第 4 作者
（60） QUICK identification and SPR validation of signal transducers and activators of transcription 3 (Stat3) interacting proteins, JOURNAL OF PROTEOMICS, 2012, 第 4 作者
（61） 14-3-3 zeta Interacts with Stat3 and Regulates Its Constitutive Activation in Multiple Myeloma Cells, PLOS ONE, 2012, 第 5 作者

   

（1） Small RNA ASpks2 promotes Mycobacterium tuberculosis survival in macrophages via targeting polyketide synthase 2, J. Biol. Chem., 2026, 第 5 作者  通讯作者
（2） Lysine methyltransferase Sll0171 modulates motility through PilA1 methylation in Synechocystis sp. PCC 6803, Plant Physiology, 2026, 第 5 作者  通讯作者
（3） Global discovery of RNA modifications and functional analysis of m5C methylome in cyanobacteria, JOURNAL OF BIOLOGICAL CHEMISTRY, 2026, 第 6 作者  通讯作者
（4） cKAT acetylation of the CO2 hydration protein ChpX regulates the CO2 concentrating mechanism in cyanobacteria, Plant Physiology, 2026, 第 8 作者  通讯作者
（5） Lysine acetylation in cyanobacteria: emerging mechanisms and functions, BIOCHEMICAL SOCIETY TRANSACTIONS, 2025, 第 2 作者
（6） Decoding the Nature of the Peritrich Stalk: A Distinctive Organelle in a Large Group of Ciliated Unicellular Eukaryotes, JOURNAL OF EUKARYOTIC MICROBIOLOGY, 2025, 第 12 作者
（7） Functional characterization of the plastidial enzyme GPAT in microalgae and its potential role in lipid biosynthesis, PLANT PHYSIOLOGY, 2025, 第 7 作者
（8） The role of CddA and cGNAT2 in crotonylation of proteins in cyanobacteria, NEW PHYTOLOGIST, 2025, 第 6 作者  通讯作者
（9） Interactome Analysis of ClpX Reveals Its Regulatory Role in Metabolism and Photosynthesis in Cyanobacteria, JOURNAL OF PROTEOME RESEARCH, 2024, 第 7 作者  通讯作者
（10） Identification and Functional Analysis of Lysine 2-Hydroxyisobutyrylation in Cyanobacteria, JOURNAL OF PROTEOME RESEARCH, 2024, 第 8 作者  通讯作者
（11） Deciphering the structure, function, and mechanism of lysine acetyltransferase cGNAT2 in cyanobacteria, PLANT PHYSIOLOGY, 2024, 第 2 作者
（12） Improving the genome and proteome annotations of the marine model diatom Thalassiosira pseudonana using a proteogenomics strategy, Improving the genome and proteome annotations of the marine model diatom Thalassiosira pseudonana using a proteogenomics strategy, MARINE LIFE SCIENCE & TECHNOLOGY, 2023, 第 2 作者
（13） iGDP: an integrated Genome Decontamination Pipeline for wild ciliated microeukaryotes, Molecular Ecology Resources, 2023, 
（14） ClpP2蛋白失活对集胞藻PCC6803生长、光合作用和蛋白质组的影响, Effects of ClpP2 protein inactivation on growth, photosynthesis, and proteome of Synechocystis sp. PCC6803, 微生物学通报, 2023, 第 4 作者
（15） cKMT1 is a New Lysine Methyltransferase That Methylates the Ferredoxin-NADP(+) Oxidoreductase and Regulates Energy Transfer in Cyanobacteria, MOLECULAR & CELLULAR PROTEOMICS, 2023, 第 11 作者  通讯作者
（16） Giant proteins in a giant cell: Molecular basis of ultrafast Ca2+-dependent cell contraction, SCIENCE ADVANCES, 2023, 第 6 作者
（17） Systematic Survey of the Regulatory Networks of the Long Noncoding RNA BANCR in Cervical Cancer Cells br, JOURNAL OF PROTEOME RESEARCH, 2022, 第 5 作者  通讯作者
（18） Polarization of Tumor-Associated Macrophages Promoted by Vitamin C-Loaded Liposomes for Cancer Immunotherapy, ACS NANO, 2022, 第 2 作者
（19） Systematic Survey of the Regulatory Networks of the Long Noncoding RNA BANCR in Cervical Cancer Cells, JOURNAL OF PROTEOME RESEARCH, 2022, 第 5 作者  通讯作者
（20） Proteomic analysis of the regulatory networks of ClpX in a model cyanobacterium Synechocystis sp. PCC 6803, FRONTIERS IN PLANT SCIENCE, 2022, 第 6 作者  通讯作者
（21） Ras subfamily GTPases regulate development, aflatoxin biosynthesis and pathogenicity in the fungus Aspergillus flavus, ENVIRONMENTAL MICROBIOLOGY, 2021, 第 3 作者
（22） Quantitative Proteomics Reveals the Protein Regulatory Network of Anabaena sp. PCC 7120 under Nitrogen Deficiency, JOURNAL OF PROTEOME RESEARCH, 2021, 第 4 作者  通讯作者
（23） Proteogenomic Analysis Provides Novel Insight into Genome Annotation and Nitrogen Metabolism in Nostoc sp. PCC 7120, MICROBIOLOGY SPECTRUM, 2021, 第 2 作者
（24） Proteogenomic Characterization of the Pathogenic Fungus Aspergillus flavus Reveals Novel Genes Involved in Aflatoxin Production, MOLECULAR & CELLULAR PROTEOMICS, 2021, 第 1 作者
（25） A novel phosphoinositide kinase Fab1 regulates biosynthesis of pathogenic aflatoxin in Aspergillus flavus, VIRULENCE, 2021, 第 1 作者
（26） Ras subfamily GTPases regulate development, aflatoxin biosynthesis and pathogenicity in the fungus Aspergillus flavus, ENVIRONMENTAL MICROBIOLOGY, 2021, 第 3 作者
（27） Proteogenomic Characterization of the Pathogenic Fungus Aspergillus flavus Reveals Novel Genes Involved in Aflatoxin Production, MOLECULAR & CELLULAR PROTEOMICS, 2021, 第 1 作者
（28） Quantitative Proteomics Reveals the Protein Regulatory Network of Anabaena sp. PCC 7120 under Nitrogen Deficiency, JOURNAL OF PROTEOME RESEARCH, 2021, 第 4 作者  通讯作者
（29） Characterization of Lysine Monomethylome and Methyltransferase in Model Cyanobacterium Synechocystis sp. PCC 6803, GENOMICS PROTEOMICS & BIOINFORMATICS, 2020, 第 2 作者
（30） Antioxidant-related catalase CTA1 regulates development, aflatoxin biosynthesis, and virulence in pathogenic fungus Aspergillus flavus, ENVIRONMENTAL MICROBIOLOGY, 2020, 第 2 作者
（31） Characterization of Lysine Monomethylome and Methyltransferase in Model Cyanobacterium Synechocystis sp.PCC 6803, Characterization of Lysine Monomethylome and Methyltransferase in Model Cyanobacterium Synechocystis sp. PCC 6803, GENOMICS PROTEOMICS & BIOINFORMATICS, 2020, 第 2 作者
（32） Antioxidant-related catalase CTA1 regulates development, aflatoxin biosynthesis, and virulence in pathogenic fungus Aspergillus flavus, ENVIRONMENTAL MICROBIOLOGY, 2020, 第 2 作者
（33） Structural and Functional Insights into a Lysine Deacylase in the Cyanobacterium Synechococcus sp. PCC 7002, PLANT PHYSIOLOGY, 2020, 第 2 作者
（34） Lysine Propionylation is a Widespread Post-Translational Modification Involved in Regulation of Photosynthesis and Metabolism in Cyanobacteria, INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2019, 第 1 作者
（35） Lysine acetylation contributes to development, aflatoxin biosynthesis and pathogenicity in Aspergillus flavus, ENVIRONMENTAL MICROBIOLOGY, 2019, 第 4 作者
（36） E6 Protein Expressed by High-Risk HPV Activates Super-Enhancers of the EGFR and c-MET Oncogenes by Destabilizing the Histone, CANCER RESEARCH, 2018, 第 7 作者
（37） Lysine Succinylation Contributes to Aflatoxin Production and Pathogenicity in Aspergillus flavus, MOLECULAR & CELLULAR PROTEOMICS, 2018, 第 2 作者
（38） Effects of PSII Manganese-Stabilizing Protein Succinylation on Photosynthesis in the Model Cyanobacterium Synechococcus sp PCC 7002, PLANT AND CELL PHYSIOLOGY, 2018, 第 2 作者
（39） Genome Annotation of a Model Diatom Phaeodactylum tricornutum Using an Integrated Proteogenomic Pipeline, MOLECULAR PLANT, 2018, 第 1 作者
（40） Systematic Identification of Mycobacterium tuberculosis Effectors Reveals that BfrB Suppresses Innate Immunity, MOLECULAR & CELLULAR PROTEOMICS, 2017, 第 10 作者
（41） Systematic Identification of Mycobacterium tuberculosis Effectors Reveals that BfrB Suppresses Innate Immunity, MOLECULAR & CELLULAR PROTEOMICS, 2017, 第 10 作者
（42） Lysine acetylation regulates the activity of Escherichia coli pyridoxine 5’-phosphate oxidase., Acta Biochimica et Biophysica Sinica, 2017, 第 5 作者
（43） Malonylome Analysis Reveals the Involvement of Lysine Malonylation in Metabolism and Photosynthesis in Cyanobacteria, JOURNAL OF PROTEOME RESEARCH, 2017, 第 2 作者
（44） Lysine acetylation regulates the activity of Escherichia coil pyridoxine 5＇-phosphate oxidase, Lysine acetylation regulates the activity of Escherichia coil pyridoxine 5＇-phosphate oxidase, 生物化学与生物物理学报：英文版, 2017, 第 5 作者
（45） Lysine Acetylome Analysis Reveals Photosystem II Manganese-stabilizing Protein Acetylation is Involved in Negative Regulation of Oxygen Evolution in Model Cyanobacterium Synechococcus sp PCC 7002, MOLECULARCELLULARPROTEOMICS, 2017, 第 3 作者
（46） 蓝藻的蛋白质翻译后修饰研究进展, PROGRESS ON PROTEIN POST-TRANSLATIONAL MODIFICATION IN CYANOBACTERIA, 水生生物学报, 2016, 第 1 作者
（47） GAPP: A Proteogenomic Software for Genome Annotation and Global Profiling of Post-translational Modifications in Prokaryotes, MOLECULAR & CELLULAR PROTEOMICS, 2016, 第 2 作者
（48） Global Phosphoproteomic Analysis Reveals the Involvement of Phosphorylation in Aflatoxins Biosynthesis in the Pathogenic Fungus Aspergillus flavus, SCIENTIFIC REPORTS, 2016, 第 2 作者
（49） Succinylome Analysis Reveals the Involvement of Lysine Succinylation in Metabolism in Pathogenic Mycobacterium tuberculosis, MOLECULAR & CELLULAR PROTEOMICS, 2015, 第 1 作者
（50） Systematic identification of arsenic-binding proteins reveals that hexokinase-2 is inhibited by arsenic, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2015, 第 9 作者
（51） Effects of Phosphorylation of beta Subunits of Phycocyanins on State Transition in the Model Cyanobacterium Synechocystis sp PCC 6803, PLANT AND CELL PHYSIOLOGY, 2015, 第 4 作者
（52） Unique diversity of the venom peptides from the scorpion Androctonus bicolor revealed by transcriptomic and proteomic analysis, JOURNAL OF PROTEOMICS, 2015, 第 5 作者
（53） Acetylome Analysis Reveals the Involvement of Lysine Acetylation in Photosynthesis and Carbon Metabolism in the Model Cyanobacterium Synechocystis sp PCC 6803, JOURNAL OF PROTEOME RESEARCH, 2015, 第 2 作者
（54） Analysis of phosphoproteome in rice pistil, PROTEOMICS, 2014, 第 5 作者
（55） Proteogenomic analysis and global discovery of posttranslational modifications in prokaryotes., PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2014, 第 1 作者
（56） Acetylome Analysis Reveals Diverse Functions of Lysine Acetylation in Mycobacterium tuberculosis, MOLECULAR & CELLULAR PROTEOMICS, 2014, 第 2 作者
（57） Phosphoproteomic Analysis Provides Novel Insights into Stress Responses in Phaeodactylum tricornutum, a Model Diatom, JOURNAL OF PROTEOME RESEARCH, 2014, 第 2 作者
（58） Global Phosphoproteomic Analysis Reveals Diverse Functions of Serine/Threonine/Tyrosine Phosphorylation in the Model Cyanobacterium Synechococcus sp Strain PCC 7002, JOURNAL OF PROTEOME RESEARCH, 2013, 第 1 作者
（59） Identification of Novel miR-21 Target Proteins in Multiple Myeloma Cells by Quantitative Proteomics, JOURNAL OF PROTEOME RESEARCH, 2012, 第 4 作者
（60） QUICK identification and SPR validation of signal transducers and activators of transcription 3 (Stat3) interacting proteins, JOURNAL OF PROTEOMICS, 2012, 第 4 作者
（61） 14-3-3 zeta Interacts with Stat3 and Regulates Its Constitutive Activation in Multiple Myeloma Cells, PLOS ONE, 2012, 第 5 作者

（1） Small RNA ASpks2 promotes Mycobacterium tuberculosis survival in macrophages via targeting polyketide synthase 2, J. Biol. Chem., 2026, 第 5 作者  通讯作者
（2） Lysine methyltransferase Sll0171 modulates motility through PilA1 methylation in Synechocystis sp. PCC 6803, Plant Physiology, 2026, 第 5 作者  通讯作者
（3） Global discovery of RNA modifications and functional analysis of m5C methylome in cyanobacteria, JOURNAL OF BIOLOGICAL CHEMISTRY, 2026, 第 6 作者  通讯作者
（4） cKAT acetylation of the CO2 hydration protein ChpX regulates the CO2 concentrating mechanism in cyanobacteria, Plant Physiology, 2026, 第 8 作者  通讯作者
（5） Lysine acetylation in cyanobacteria: emerging mechanisms and functions, BIOCHEMICAL SOCIETY TRANSACTIONS, 2025, 第 2 作者
（6） Decoding the Nature of the Peritrich Stalk: A Distinctive Organelle in a Large Group of Ciliated Unicellular Eukaryotes, JOURNAL OF EUKARYOTIC MICROBIOLOGY, 2025, 第 12 作者
（7） Functional characterization of the plastidial enzyme GPAT in microalgae and its potential role in lipid biosynthesis, PLANT PHYSIOLOGY, 2025, 第 7 作者
（8） The role of CddA and cGNAT2 in crotonylation of proteins in cyanobacteria, NEW PHYTOLOGIST, 2025, 第 6 作者  通讯作者
（9） Interactome Analysis of ClpX Reveals Its Regulatory Role in Metabolism and Photosynthesis in Cyanobacteria, JOURNAL OF PROTEOME RESEARCH, 2024, 第 7 作者  通讯作者
（10） Identification and Functional Analysis of Lysine 2-Hydroxyisobutyrylation in Cyanobacteria, JOURNAL OF PROTEOME RESEARCH, 2024, 第 8 作者  通讯作者
（11） Deciphering the structure, function, and mechanism of lysine acetyltransferase cGNAT2 in cyanobacteria, PLANT PHYSIOLOGY, 2024, 第 2 作者
（12） Improving the genome and proteome annotations of the marine model diatom Thalassiosira pseudonana using a proteogenomics strategy, Improving the genome and proteome annotations of the marine model diatom Thalassiosira pseudonana using a proteogenomics strategy, MARINE LIFE SCIENCE & TECHNOLOGY, 2023, 第 2 作者
（13） iGDP: an integrated Genome Decontamination Pipeline for wild ciliated microeukaryotes, Molecular Ecology Resources, 2023, 
（14） ClpP2蛋白失活对集胞藻PCC6803生长、光合作用和蛋白质组的影响, Effects of ClpP2 protein inactivation on growth, photosynthesis, and proteome of Synechocystis sp. PCC6803, 微生物学通报, 2023, 第 4 作者
（15） cKMT1 is a New Lysine Methyltransferase That Methylates the Ferredoxin-NADP(+) Oxidoreductase and Regulates Energy Transfer in Cyanobacteria, MOLECULAR & CELLULAR PROTEOMICS, 2023, 第 11 作者  通讯作者
（16） Giant proteins in a giant cell: Molecular basis of ultrafast Ca2+-dependent cell contraction, SCIENCE ADVANCES, 2023, 第 6 作者
（17） Systematic Survey of the Regulatory Networks of the Long Noncoding RNA BANCR in Cervical Cancer Cells br, JOURNAL OF PROTEOME RESEARCH, 2022, 第 5 作者  通讯作者
（18） Polarization of Tumor-Associated Macrophages Promoted by Vitamin C-Loaded Liposomes for Cancer Immunotherapy, ACS NANO, 2022, 第 2 作者
（19） Systematic Survey of the Regulatory Networks of the Long Noncoding RNA BANCR in Cervical Cancer Cells, JOURNAL OF PROTEOME RESEARCH, 2022, 第 5 作者  通讯作者
（20） Proteomic analysis of the regulatory networks of ClpX in a model cyanobacterium Synechocystis sp. PCC 6803, FRONTIERS IN PLANT SCIENCE, 2022, 第 6 作者  通讯作者
（21） Ras subfamily GTPases regulate development, aflatoxin biosynthesis and pathogenicity in the fungus Aspergillus flavus, ENVIRONMENTAL MICROBIOLOGY, 2021, 第 3 作者
（22） Quantitative Proteomics Reveals the Protein Regulatory Network of Anabaena sp. PCC 7120 under Nitrogen Deficiency, JOURNAL OF PROTEOME RESEARCH, 2021, 第 4 作者  通讯作者
（23） Proteogenomic Analysis Provides Novel Insight into Genome Annotation and Nitrogen Metabolism in Nostoc sp. PCC 7120, MICROBIOLOGY SPECTRUM, 2021, 第 2 作者
（24） Proteogenomic Characterization of the Pathogenic Fungus Aspergillus flavus Reveals Novel Genes Involved in Aflatoxin Production, MOLECULAR & CELLULAR PROTEOMICS, 2021, 第 1 作者
（25） A novel phosphoinositide kinase Fab1 regulates biosynthesis of pathogenic aflatoxin in Aspergillus flavus, VIRULENCE, 2021, 第 1 作者
（26） Ras subfamily GTPases regulate development, aflatoxin biosynthesis and pathogenicity in the fungus Aspergillus flavus, ENVIRONMENTAL MICROBIOLOGY, 2021, 第 3 作者
（27） Proteogenomic Characterization of the Pathogenic Fungus Aspergillus flavus Reveals Novel Genes Involved in Aflatoxin Production, MOLECULAR & CELLULAR PROTEOMICS, 2021, 第 1 作者
（28） Quantitative Proteomics Reveals the Protein Regulatory Network of Anabaena sp. PCC 7120 under Nitrogen Deficiency, JOURNAL OF PROTEOME RESEARCH, 2021, 第 4 作者  通讯作者
（29） Characterization of Lysine Monomethylome and Methyltransferase in Model Cyanobacterium Synechocystis sp. PCC 6803, GENOMICS PROTEOMICS & BIOINFORMATICS, 2020, 第 2 作者
（30） Antioxidant-related catalase CTA1 regulates development, aflatoxin biosynthesis, and virulence in pathogenic fungus Aspergillus flavus, ENVIRONMENTAL MICROBIOLOGY, 2020, 第 2 作者
（31） Characterization of Lysine Monomethylome and Methyltransferase in Model Cyanobacterium Synechocystis sp.PCC 6803, Characterization of Lysine Monomethylome and Methyltransferase in Model Cyanobacterium Synechocystis sp. PCC 6803, GENOMICS PROTEOMICS & BIOINFORMATICS, 2020, 第 2 作者
（32） Antioxidant-related catalase CTA1 regulates development, aflatoxin biosynthesis, and virulence in pathogenic fungus Aspergillus flavus, ENVIRONMENTAL MICROBIOLOGY, 2020, 第 2 作者
（33） Structural and Functional Insights into a Lysine Deacylase in the Cyanobacterium Synechococcus sp. PCC 7002, PLANT PHYSIOLOGY, 2020, 第 2 作者
（34） Lysine Propionylation is a Widespread Post-Translational Modification Involved in Regulation of Photosynthesis and Metabolism in Cyanobacteria, INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2019, 第 1 作者
（35） Lysine acetylation contributes to development, aflatoxin biosynthesis and pathogenicity in Aspergillus flavus, ENVIRONMENTAL MICROBIOLOGY, 2019, 第 4 作者
（36） E6 Protein Expressed by High-Risk HPV Activates Super-Enhancers of the EGFR and c-MET Oncogenes by Destabilizing the Histone, CANCER RESEARCH, 2018, 第 7 作者
（37） Lysine Succinylation Contributes to Aflatoxin Production and Pathogenicity in Aspergillus flavus, MOLECULAR & CELLULAR PROTEOMICS, 2018, 第 2 作者
（38） Effects of PSII Manganese-Stabilizing Protein Succinylation on Photosynthesis in the Model Cyanobacterium Synechococcus sp PCC 7002, PLANT AND CELL PHYSIOLOGY, 2018, 第 2 作者
（39） Genome Annotation of a Model Diatom Phaeodactylum tricornutum Using an Integrated Proteogenomic Pipeline, MOLECULAR PLANT, 2018, 第 1 作者
（40） Systematic Identification of Mycobacterium tuberculosis Effectors Reveals that BfrB Suppresses Innate Immunity, MOLECULAR & CELLULAR PROTEOMICS, 2017, 第 10 作者
（41） Systematic Identification of Mycobacterium tuberculosis Effectors Reveals that BfrB Suppresses Innate Immunity, MOLECULAR & CELLULAR PROTEOMICS, 2017, 第 10 作者
（42） Lysine acetylation regulates the activity of Escherichia coli pyridoxine 5’-phosphate oxidase., Acta Biochimica et Biophysica Sinica, 2017, 第 5 作者
（43） Malonylome Analysis Reveals the Involvement of Lysine Malonylation in Metabolism and Photosynthesis in Cyanobacteria, JOURNAL OF PROTEOME RESEARCH, 2017, 第 2 作者
（44） Lysine acetylation regulates the activity of Escherichia coil pyridoxine 5＇-phosphate oxidase, Lysine acetylation regulates the activity of Escherichia coil pyridoxine 5＇-phosphate oxidase, 生物化学与生物物理学报：英文版, 2017, 第 5 作者
（45） Lysine Acetylome Analysis Reveals Photosystem II Manganese-stabilizing Protein Acetylation is Involved in Negative Regulation of Oxygen Evolution in Model Cyanobacterium Synechococcus sp PCC 7002, MOLECULARCELLULARPROTEOMICS, 2017, 第 3 作者
（46） 蓝藻的蛋白质翻译后修饰研究进展, PROGRESS ON PROTEIN POST-TRANSLATIONAL MODIFICATION IN CYANOBACTERIA, 水生生物学报, 2016, 第 1 作者
（47） GAPP: A Proteogenomic Software for Genome Annotation and Global Profiling of Post-translational Modifications in Prokaryotes, MOLECULAR & CELLULAR PROTEOMICS, 2016, 第 2 作者
（48） Global Phosphoproteomic Analysis Reveals the Involvement of Phosphorylation in Aflatoxins Biosynthesis in the Pathogenic Fungus Aspergillus flavus, SCIENTIFIC REPORTS, 2016, 第 2 作者
（49） Succinylome Analysis Reveals the Involvement of Lysine Succinylation in Metabolism in Pathogenic Mycobacterium tuberculosis, MOLECULAR & CELLULAR PROTEOMICS, 2015, 第 1 作者
（50） Systematic identification of arsenic-binding proteins reveals that hexokinase-2 is inhibited by arsenic, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2015, 第 9 作者
（51） Effects of Phosphorylation of beta Subunits of Phycocyanins on State Transition in the Model Cyanobacterium Synechocystis sp PCC 6803, PLANT AND CELL PHYSIOLOGY, 2015, 第 4 作者
（52） Unique diversity of the venom peptides from the scorpion Androctonus bicolor revealed by transcriptomic and proteomic analysis, JOURNAL OF PROTEOMICS, 2015, 第 5 作者
（53） Acetylome Analysis Reveals the Involvement of Lysine Acetylation in Photosynthesis and Carbon Metabolism in the Model Cyanobacterium Synechocystis sp PCC 6803, JOURNAL OF PROTEOME RESEARCH, 2015, 第 2 作者
（54） Analysis of phosphoproteome in rice pistil, PROTEOMICS, 2014, 第 5 作者
（55） Proteogenomic analysis and global discovery of posttranslational modifications in prokaryotes., PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2014, 第 1 作者
（56） Acetylome Analysis Reveals Diverse Functions of Lysine Acetylation in Mycobacterium tuberculosis, MOLECULAR & CELLULAR PROTEOMICS, 2014, 第 2 作者
（57） Phosphoproteomic Analysis Provides Novel Insights into Stress Responses in Phaeodactylum tricornutum, a Model Diatom, JOURNAL OF PROTEOME RESEARCH, 2014, 第 2 作者
（58） Global Phosphoproteomic Analysis Reveals Diverse Functions of Serine/Threonine/Tyrosine Phosphorylation in the Model Cyanobacterium Synechococcus sp Strain PCC 7002, JOURNAL OF PROTEOME RESEARCH, 2013, 第 1 作者
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（60） QUICK identification and SPR validation of signal transducers and activators of transcription 3 (Stat3) interacting proteins, JOURNAL OF PROTEOMICS, 2012, 第 4 作者
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（ 1 ） 单细胞蛋白质组分析仪, 参与, 中国科学院计划, 2026-06--2028-06
（ 2 ） 结核菌多组学生物标志物发现, 参与, 国家任务, 2023-12--2026-11

（ 1 ） 单细胞蛋白质组分析仪, 参与, 中国科学院计划, 2026-06--2028-06
（ 2 ） 结核菌多组学生物标志物发现, 参与, 国家任务, 2023-12--2026-11

   

（ 1 ） 单细胞蛋白质组分析仪, 参与, 中国科学院计划, 2026-06--2028-06
（ 2 ） 结核菌多组学生物标志物发现, 参与, 国家任务, 2023-12--2026-11

（ 1 ） 单细胞蛋白质组分析仪, 参与, 中国科学院计划, 2026-06--2028-06
（ 2 ） 结核菌多组学生物标志物发现, 参与, 国家任务, 2023-12--2026-11