071007-遗传学
071022-基因组学
071021-生物信息学

植物分子遗传学
植物比较基因组学
基因组进化

1991-09--1998-07 Purdue University 博士
1988-09--1991-07 中科院遗传所 硕士
1984-09--1988-07 南开大学 学士

-- 研究生

-- 博士

   

2002-05--今 中国科学院遗传与发育生物学研究所 研究员
2001-01--2002-12 Clemson University Genomics Institute Research Assistant Professor
1999-01--2000-12 University of California, San Diego 博士后

   

[1] 周俭民, 赵燕, 何朝族, 陈明生. 水稻抗病蛋白RWR1及其应用. CN: CN110283238A, 2019-09-27.

[2] 陈明生, 石金锋. 一个和棉花纤维启始基因紧密连锁的分子标记及其应用. 中国: CN1952128, 2007-04-25.

[3] 陈明生. 一种水稻叶舌叶耳发育相关蛋白及其编码基因与应用. 中国: CN1948336, 2007-04-18.

   

[1] Sun, Yanling, Liu, Yang, Shi, Jinfeng, Wang, Lun, Liang, Chengzhi, Yang, Jun, Chen, Jinfeng, Chen, Mingsheng. Biased mutations and gene losses underlying diploidization of the tetraploid broomcorn millet genome. PLANT JOURNAL. 2023, http://dx.doi.org/10.1111/tpj.16085.
[2] Zou, Xinhui, Du, Yusu, Wang, Xin, Wang, Qian, Zhang, Bing, Chen, Jinfeng, Chen, Mingsheng, Doyle, Jeff J, Ge, Song. Genome evolution in Oryza allopolyploids of various ages: Insights into the process of diploidization. PLANT JOURNAL[J]. 2021, 105(3): 721-735, http://dx.doi.org/10.1111/tpj.15066.
[3] Tian, Peng, Zhang, Xuemei, Xia, Rui, Liu, Yang, Wang, Meijiao, Li, Bo, Liu, Tieyan, Shi, Jinfeng, Wing, Rod A, Meyers, Blake C, Chen, Mingsheng. Evolution and diversification of reproductive phased small interfering RNAs in Oryza species. NEW PHYTOLOGIST[J]. 2021, 229(5): 2970-2983, http://dx.doi.org/10.1111/nph.17035.
[4] Yu, Hong, Lin, Tao, Meng, Xiangbing, Du, Huilong, Zhang, Jingkun, Liu, Guifu, Chen, Mingjiang, Jing, Yanhui, Kou, Liquan, Li, Xiuxiu, Gao, Qiang, Liang, Yan, Liu, Xiangdong, Fan, Zhilan, Liang, Yuntao, Cheng, Zhukuan, Chen, Mingsheng, Tian, Zhixi, Wang, Yonghong, Chu, Chengcai, Zuo, Jianru, Wan, Jianmin, Qian, Qian, Han, Bin, Zuccolo, Andrea, Wing, Rod A, Gao, Caixia, Liang, Chengzhi, Li, Jiayang. A route to de novo domestication of wild allotetraploid rice. CELL[J]. 2021, 184(5): 1156-+, http://dx.doi.org/10.1016/j.cell.2021.01.013.
[5] Yi Liao, Xuemei Zhang, Bo Li, Tieyan Liu, Jinfeng Chen, Zetao Bai, Meijiao Wang, Jinfeng Shi, Jason G Walling, Rod A Wing, Jiming Jiang, Mingsheng Chen. Comparison of Oryza sativa and Oryza brachyantha Genomes Reveals Selection-Driven Gene Escape from the Centromeric Regions. THE PLANT CELL[J]. 2018, 30(8): 1729-1744, https://www.webofscience.com/wos/woscc/full-record/WOS:000444293200011.
[6] Liao, Yi, Zhang, Xuemei, Li, Bo, Liu, Tieyan, Chen, Jinfeng, Bai, Zetao, Wang, Meijiao, Shi, Jinfeng, Walling, Jason G, Wing, Rod A, Jiang, Jiming, Chen, Mingsheng. Comparison of Oryza sativa and Oryza brachyantha Genomes Reveals Selection-Driven Gene Escape from the Centromeric Regions. PLANT CELL[J]. 2018, 30(8): 1729-1744, https://www.webofscience.com/wos/woscc/full-record/WOS:000444293200011.
[7] Li, Hongchang, Ji, Guobiao, Wang, Yun, Qian, Qian, Xu, Jichen, Sodmergen, Liu, Guozhen, Zhao, Xianfeng, Chen, Mingsheng, Zhai, Wenxue, Li, Dayong, Zhu, Lihuang. WHITE PANICLE3, a Novel Nucleus-Encoded Mitochondrial Protein, Is Essential for Proper Development and Maintenance of Chloroplasts and Mitochondria in Rice. FRONTIERS IN PLANT SCIENCE[J]. 2018, 9: http://ir.siat.ac.cn:8080/handle/172644/14605.
[8] Li, Bo, Kremling, Karl A G, Wu, Penghao, Bukowski, Robert, Romay, Maria C, Xie, En, Buckler, Edward S, Chen, Mingsheng. Coregulation of ribosomal RNA with hundreds of genes contributes to phenotypic variation. GENOME RESEARCH[J]. 2018, 28(10): 1555-1565, https://www.webofscience.com/wos/woscc/full-record/WOS:000446043800011.
[9] Wang, Min, Li, Wenzhen, Fang, Chao, Xu, Fan, Liu, Yucheng, Wang, Zheng, Yang, Rui, Zhang, Min, Liu, Shulin, Lu, Sijia, Lin, Tao, Tang, Jiuyou, Wang, Yiqin, Wang, Hongru, Lin, Hao, Zhu, Baoge, Chen, Mingsheng, Kong, Fanjiang, Liu, Baohui, Zeng, Dali, Jackson, Scott A, Chu, Chengcai, Tian, Zhixi. Parallel selection on a dormancy gene during domestication of crops from multiple families. NATURE GENETICS[J]. 2018, 50(10): 1435-+, http://dx.doi.org/10.1038/s41588-018-0229-2.
[10] Stein, Joshua C, Yu, Yeisoo, Copetti, Dario, Zwickl, Derrick J, Zhang, Li, Zhang, Chengjun, Chougule, Kapeel, Gao, Dongying, Iwata, Aiko, Goicoechea, Jose Luis, Wei, Sharon, Wang, Jun, Liao, Yi, Wang, Muhua, Jacquemin, Julie, Becker, Claude, Kudrna, Dave, Zhang, Jianwei, Londono, Carlos E M, Song, Xiang, Lee, Seunghee, Sanchez, Paul, Zuccolo, Andrea, Ammiraju, Jetty S S, Talag, Jayson, Danowitz, Ann, Rivera, Luis F, Gschwend, Andrea R, Noutsos, Christos, Wu, Chengchieh, Kao, Shumin, Zeng, Jhihwun, Wei, Fujin, Zhao, Qiang, Feng, Qi, El Baidouri, Moaine, Carpentier, MarieChristine, Lasserre, Eric, Cooke, Richard, Farias, Daniel da Rosa, da Maia, Luciano Carlos, dos Santos, Railson S, Nyberg, Kevin G, McNally, Kenneth L, Mauleon, Ramil, Alexandrov, Nickolai, Schmutz, Jeremy, Flowers, Dave, Fan, Chuanzhu, Weigel, Detlef, Jena, Kshirod K, Wicker, Thomas, Chen, Mingsheng, Han, Bin, Henry, Robert, Hsing, Yueie C, Kurata, Nori, de Oliveira, Antonio Costa, Panaud, Olivier, Jackson, Scott A, Machado, Carlos A, Sanderson, Michael J, Long, Manyuan, Ware, Doreen, Wing, Rod A. Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza. NATURE GENETICS[J]. 2018, 50(2): 285-+, http://dx.doi.org/10.1038/s41588-018-0040-0.
[11] Wei, Guo, Tian, Peng, Zhang, Fengxia, Qin, Hao, Miao, Han, Chen, Qingwen, Hu, Zhongyi, Cao, Li, Wang, Meijiao, Gu, Xingfang, Huang, Sanwen, Chen, Mingsheng, Wang, Guodong. Integrative Analyses of Nontargeted Volatile Profiling and Transcriptome Data Provide Molecular Insight into VOC Diversity in Cucumber Plants (Cucumis sativus). PLANT PHYSIOLOGY[J]. 2016, 172(1): 603-618, http://dx.doi.org/10.1104/pp.16.01051.
[12] Wicker, Thomas, Yu, Yeisoo, Haberer, Georg, Mayer, Klaus F X, Marri, Pradeep Reddy, Rounsley, Steve, Chen, Mingsheng, Zuccolo, Andrea, Panaud, Olivier, Wing, Rod A, Roffler, Stefan. DNA transposon activity is associated with increased mutation rates in genes of rice and other grasses. NATURE COMMUNICATIONS[J]. 2016, 7(1): https://doaj.org/article/acfeae376dc24b259dfdd3b82a3b59e6.
[13] Bai, Zetao, Chen, Jinfeng, Liao, Yi, Wang, Meijiao, Liu, Rong, Ge, Song, Wing, Rod A, Chen, Mingsheng. The impact and origin of copy number variations in the Oryza species. BMC GENOMICS[J]. 2016, 17(1): http://dx.doi.org/10.1186/s12864-016-2589-2.
[14] Zhang, Yesheng, Zhang, Shilai, Liu, Hui, Fu, Binying, Li, Lijuan, Xie, Min, Song, Yue, Li, Xin, Cai, Jing, Wan, Wenting, Kui, Ling, Huang, Hui, Lyu, Jun, Dong, Yang, Wang, Wensheng, Huang, Liyu, Zhang, Jing, Yang, Qinzhong, Shan, Qinli, Li, Qiong, Huang, Wangqi, Tao, Dayun, Wang, Muhua, Chen, Mingsheng, Yu, Yeisoo, Wing, Rod A, Wang, Wen, Hu, Fengyi. Genome and Comparative Transcriptomics of African Wild Rice Oryza longistaminata Provide Insights into Molecular Mechanism of Rhizomatousness and Self-Incompatibility. MOLECULAR PLANT[J]. 2015, 8(11): 1683-1686, http://dx.doi.org/10.1016/j.molp.2015.08.006.
[15] Copetti, Dario, Zhang, Jianwei, El Baidouri, Moaine, Gao, Dongying, Wang, Jun, Barghini, Elena, Cossu, Rosa M, Angelova, Angelina, Maldonado, Carlos E L, Roffler, Stefan, Ohyanagi, Hajime, Wicker, Thomas, Fan, Chuanzhu, Zuccolo, Andrea, Chen, Mingsheng, de Oliveira, Antonio Costa, Han, Bin, Henry, Robert, Hsing, Yueie, Kurata, Nori, Wang, Wen, Jackson, Scott A, Panaud, Olivier, Wing, Rod A. RiTE database: a resource database for genus-wide rice genomics and evolutionary biology. BMC GENOMICS[J]. 2015, 16(1): http://dx.doi.org/10.1186/s12864-015-1762-3.
[16] Yesheng Zhang, Shilai Zhang, Hui Liu, Binying Fu, Lijuan Li, Min Xie, Yue Song, Xin Li, Jing Cai, Wenting Wan, Ling Kui, Hui Huang, Jun Lyu, Yang Dong, Wensheng Wang, Liyu Fluang, Jing Zhang, Qinzhong Yang, Qinfi Shan, Qiong Li, Wangqi Huang, Dayun Tao, Muhua Wang, Mingsheng Chen, Yeisoo Yu, Rod A. Wing, Wen Wang, Fengyi Hu. Genome and Comparative Transcriptomics of African Wild Rice Oryza Iongistaminata Provide Insights into Molecular Mechanism of Rhizomatousness and Self-Incompatibility. 分子植物：英文版[J]. 2015, 8(11): 1683-1686, http://lib.cqvip.com/Qikan/Article/Detail?id=666921961.
[17] Wang, Muhua, Yu, Yeisoo, Haberer, Georg, Marri, Pradeep Reddy, Fan, Chuanzhu, Goicoechea, Jose Luis, Zuccolo, Andrea, Song, Xiang, Kudrna, Dave, Ammiraju, Jetty S S, Cossu, Rosa Maria, Maldonado, Carlos, Chen, Jinfeng, Lee, Seunghee, Sisneros, Nick, de Baynast, Kristi, Golser, Wolfgang, Wissotski, Marina, Kim, Woojin, Sanchez, Paul, Ndjiondjop, MarieNoelle, Sanni, Kayode, Long, Manyuan, Carney, Judith, Panaud, Olivier, Wicker, Thomas, Machado, Carlos A, Chen, Mingsheng, Mayer, Klaus F X, Rounsley, Steve, Wing, Rod A. The genome sequence of African rice (Oryza glaberrima) and evidence for independent domestication. NATURE GENETICS[J]. 2014, 46(9): 982-+, https://www.webofscience.com/wos/woscc/full-record/WOS:000341579400012.
[18] Jacquemin, Julie, Ammiraju, Jetty S S, Haberer, Georg, Billheimer, Dean D, Yu, Yeisoo, Liu, Liana C, Rivera, Luis F, Mayer, Klaus, Chen, Mingsheng, Wing, Rod A. Fifteen Million Years of Evolution in the Oryza Genus Shows Extensive Gene Family Expansion. MOLECULAR PLANT[J]. 2014, 7(4): 642-656, http://dx.doi.org/10.1093/mp/sst149.
[19] 刘铁燕, 陈明生. 稻属植物的基因组进化. 生物多样性[J]. 2014, 22(1): 51-65, http://sciencechina.cn/gw.jsp?action=detail.jsp&internal_id=5051165&detailType=1.
[20] Sui, Yi, Li, Bo, Shi, Jinfeng, Chen, Mingsheng. Genomic, regulatory and epigenetic mechanisms underlying duplicated gene evolution in the natural allotetraploid Oryza minuta. BMC GENOMICS[J]. 2014, 15(1): 11-11, http://dx.doi.org/10.1186/1471-2164-15-11.
[21] Zhou, Hai, Zhou, Ming, Yang, Yuanzhu, Li, Jing, Zhu, Liya, Jiang, Dagang, Dong, Jingfang, Liu, Qinjian, Gu, Lianfeng, Zhou, Lingyan, Feng, Mingji, Qin, Peng, Hu, Xiaochun, Song, Chengli, Shi, Jinfeng, Song, Xianwei, Ni, Erdong, Wu, Xiaojin, Deng, Qiyun, Liu, Zhenlan, Chen, Mingsheng, Liu, YaoGuang, Cao, Xiaofeng, Zhuang, Chuxiong. RNase Z(S1) processes Ub(L40) mRNAs and controls thermosensitive genic male sterility in rice. NATURE COMMUNICATIONS[J]. 2014, 5: https://www.webofscience.com/wos/woscc/full-record/WOS:000342983300011.
[22] Gao, ZhenYu, Zhao, ShanCen, He, WeiMing, Guo, LongBiao, Peng, YouLin, Wang, JinJin, Guo, XiaoSen, Zhang, XueMei, Rao, YuChun, Zhang, Chi, Dong, GuoJun, Zheng, FengYa, Lu, ChangXin, Hu, Jiang, Zhou, Qing, Liu, HuiJuan, Wu, HaiYang, Xu, Jie, Ni, PeiXiang, Zeng, DaLi, Liu, DengHui, Tian, Peng, Gong, LiHui, Ye, Chen, Zhang, GuangHeng, Wang, Jian, Tian, FuKuan, Xue, DaWei, Liao, Yi, Zhu, Li, Chen, MingSheng, Li, JiaYang, Cheng, ShiHua, Zhang, GengYun, Wang, Jun, Qian, Qian. Dissecting yield-associated loci in super hybrid rice by resequencing recombinant inbred lines and improving parental genome sequences. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA[J]. 2013, 110(35): 14492-14497, https://www.webofscience.com/wos/woscc/full-record/WOS:000323564600082.
[23] Chen, Jinfeng, Huang, Quanfei, Gao, Dongying, Wang, Junyi, Lang, Yongshan, Liu, Tieyan, Li, Bo, Bai, Zetao, Goicoechea, Jose Luis, Liang, Chengzhi, Chen, Chengbin, Zhang, Wenli, Sun, Shouhong, Liao, Yi, Zhang, Xuemei, Yang, Lu, Song, Chengli, Wang, Meijiao, Shi, Jinfeng, Liu, Geng, Liu, Junjie, Zhou, Heling, Zhou, Weili, Yu, Qiulin, An, Na, Chen, Yan, Cai, Qingle, Wang, Bo, Liu, Binghang, Min, Jiumeng, Huang, Ying, Wu, Honglong, Li, Zhenyu, Zhang, Yong, Yin, Ye, Song, Wenqin, Jiang, Jiming, Jackson, Scott A, Wing, Rod A, Wang, Jun, Chen, Mingsheng. Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying Oryza genome evolution. NATURE COMMUNICATIONS[J]. 2013, 4: 1595-, http://dx.doi.org/10.1038/ncomms2596.
[24] Yang, Lu, Liu, Tieyan, Li, Bo, Sui, Yi, Chen, Jinfeng, Shi, Jinfeng, Wing, Rod A, Chen, Mingsheng. Comparative Sequence Analysis of the Ghd7 Orthologous Regions Revealed Movement of Ghd7 in the Grass Genomes. PLOS ONE[J]. 2012, 7(11): http://dx.doi.org/10.1371/journal.pone.0050236.
[25] Gao, Dongying, Chen, Jinfeng, Chen, Mingsheng, Meyers, Blake C, Jackson, Scott. A Highly Conserved, Small LTR Retrotransposon that Preferentially Targets Genes in Grass Genomes. PLOS ONE[J]. 2012, 7(2): https://doaj.org/article/cb24c15609334793bc2dbb1b511d061f.
[26] Xiang, Tingting, Zong, Na, Zhang, Jie, Chen, Jinfeng, Chen, Mingsheng, Zhou, JianMin. BAK1 Is Not a Target of the Pseudomonas syringae Effector AvrPto. MOLECULAR PLANT-MICROBE INTERACTIONS[J]. 2011, 24(1): 100-107, https://doaj.org/article/7c91748f9a354a288bbc26b6acab1216.
[27] Wang, Rongchen, Guan, Peizhu, Chen, Mingsheng, Xing, Xiujuan, Zhang, Yali, Crawford, Nigel M. Multiple Regulatory Elements in the Arabidopsis NIA1 Promoter Act Synergistically to Form a Nitrate Enhancer. PLANT PHYSIOLOGY[J]. 2010, 154(1): 423-432, https://www.webofscience.com/wos/woscc/full-record/WOS:000281570000034.
[28] Sanyal, Abhijit, Ammiraju, Jetty S S, Lu, Fei, Yu, Yeisoo, Rambo, Teri, Currie, Jennifer, Kollura, Kristi, Kim, HyeRan, Chen, Jinfeng, Ma, Jianxin, Miguel, Phillip San, Chen Mingsheng, Wing, Rod A, Jackson, Scott A. Orthologous Comparisons of the Hd1 Region across Genera Reveal Hd1 Gene Lability within Diploid Oryza Species and Disruptions to Microsynteny in Sorghum. MOLECULAR BIOLOGY AND EVOLUTION[J]. 2010, 27(11): 2487-2506, https://www.webofscience.com/wos/woscc/full-record/WOS:000283118000007.
[29] Wang, Chunfang, Chen, Jinfeng, Zhi, Hui, Yang, Lu, Li, Wei, Wang, Yongfang, Li, Haiquan, Zhao, Baohua, Chen, Mingsheng, Diao, Xianmin. Population genetics of foxtail millet and its wild ancestor. BMC GENETICS[J]. 2010, 11(1): 90-90, http://dx.doi.org/10.1186/1471-2156-11-90.
[30] Xianmin Diao, Mingsheng Chen, Baohua Zhao, Haiquan Li, Yongfang Wang, Wei Li, Lu Yang, Hui Zhi, Jinfeng Chen, Chunfang Wang. Population genetics of foxtail millet and its wild ancestor. 2010, http://oa.las.ac.cn/oainone/service/browseall/read1?ptype=JA&workid=JA201706296298818ZK.
[31] Li, Feng, Liu, Wenbo, Tang, Jiuyou, Chen, Jinfeng, Tong, Hongning, Hu, Bin, Li, Chunlai, Fang, Jun, Chen, Mingsheng, Chu, Chengcai. Rice DENSE AND ERECT PANICLE 2 is essential for determining panicle outgrowth and elongation. CELL RESEARCH[J]. 2010, 20(7): 838-849, http://www.corc.org.cn/handle/1471x/2411922.
[32] Feng Li, Wenbo Liu, Jiuyou Tang, Jinfeng Chen, Hongning Tong, Bin Hu, Chunlai Li, Jun Fang, Mingsheng Chen, Chengcai Chu. Rice DENSE AND ERECT PANICLE 2 is essential for determining panicle outgrowth and elongation. 细胞研究：英文版[J]. 2010, 838-849, http://lib.cqvip.com/Qikan/Article/Detail?id=34527318.
[33] Goicoechea, Jose Luis, Ammiraju, Jetty Siva S, Marri, Pradeep Reddy, Chen, Mingsheng, Jackson, Scott, Yu, Yeisoo, Rounsley, Steve, Wing, Rod A. The Future of Rice Genomics: Sequencing the Collective Oryza Genome. RICE[J]. 2010, 3(2-3): 89-97, https://www.webofscience.com/wos/woscc/full-record/WOS:000282788200002.
[34] Ammiraju, Jetty S S, Fan, Chuanzhu, Yu, Yeisoo, Song, Xiang, Cranston, Karen A, Pontaroli, Ana Clara, Lu, Fei, Sanyal, Abhijit, Jiang, Ning, Rambo, Teri, Currie, Jennifer, Collura, Kristi, Talag, Jayson, Bennetzen, Jeffrey L, Chen, Mingsheng, Jackson, Scott, Wing, Rod A. Spatio-temporal patterns of genome evolution in allotetraploid species of the genus Oryza. PLANT JOURNAL[J]. 2010, 63(3): 430-442, http://dx.doi.org/10.1111/j.1365-313X.2010.04251.x.
[35] Cui, Haitao, Wang, Yujing, Xue, Li, Chu, Jinfang, Yan, Cunyu, Fu, Jihong, Chen, Mingsheng, Innes, Roger W, Zhou, JianMin. Pseudomonas syringae Effector Protein AvrB Perturbs Arabidopsis Hormone Signaling by Activating MAP Kinase 4. CELL HOST & MICROBE[J]. 2010, 7(2): 164-175, http://dx.doi.org/10.1016/j.chom.2010.01.009.
[36] 陈明生. Dynamic Genome Evolution of Oryza - A Genus-Wide Comparative Analysis. In DARWIN S HERITAGE TODAY: Proceedings of the Darwin 200 Beijing International Conference. 2010, [37] Deng, Zhiyong, Li, Yin, Xia, Ran, Wang, Weiquan, Huang, Xiahe, Zhang, Ling, Zhang, Shengli, Yang, Cuiping, Zhang, Yiyue, Chen, Mingsheng, Xie, Qi. Structural analysis of 83-kb genomic DNA from Thellungiella halophila: Sequence features and microcolinearity between salt cress and Arabidopsis thaliana. GENOMICS[J]. 2009, 94(5): 324-332, http://dx.doi.org/10.1016/j.ygeno.2009.07.006.
[38] 陈明生. Comparative sequence analysis of the MONOCULM1 orthologous regions in fourteen Oryza genomes. Proc Natl Acad Sci U S A. 2009, [39] Mueller, Lukas A, Lankhorst, Rene Klein, Tanksley, Steven D, Giovannoni, James J, White, Ruth, Vrebalov, Julia, Fei, Zhangjun, van Eck, Joyce, Buels, Robert, Mills, Adri A, Menda, Naama, Tecle, Isaak Y, Bombarely, Aureliano, Stack, Stephen, Royer, Suzanne M, Chang, SongBin, Shearer, Lindsay A, Kim, Byung Dong, Jo, SungHwan, Hur, CheolGoo, Choi, Doil, Li, ChangBao, Zhao, Jiuhai, Jiang, Hongling, Geng, Yu, Dai, Yuanyuan, Fan, Huajie, Chen, Jinfeng, Lu, Fei, Shi, Jinfeng, Sun, Shouhong, Chen, Jianjun, Yang, Xiaohua, Lu, Chen, Chen, Mingsheng, Cheng, Zhukuan, Li, Chuanyou, Ling, Hongqing, Xue, Yongbiao, Wang, Ying, Seymour, Graham B, Bishop, Gerard J, Bryan, Glenn, Rogers, Jane, Sims, Sarah, Butcher, Sarah, Buchan, Daniel, Abbott, James, Beasley, Helen, Nicholson, Christine, Riddle, Clare, Humphray, Sean, McLaren, Karen, Mathur, Saloni, Vyas, Shailendra, Solanke, Amolkumar U, Kumar, Rahul, Gupta, Vikrant, Sharma, Arun K, Khurana, Paramjit, Khurana, Jitendra P, Tyagi, Akhilesh, Sarita, Chowdhury, Parul, Shridhar, Smriti, Chattopadhyay, Debasis, Pandit, Awadhesh, Singh, Pradeep, Kumar, Ajay, Dixit, Rekha, Singh, Archana, Praveen, Sumera, Dalal, Vivek, Yadav, Mahavir, Ghazi, Irfan Ahmad, Gaikwad, Kishor, Sharma, Tilak Raj, Mohapatra, Trilochan, Singh, Nagendra Kumar, Szinay, Dora, de Jong, Hans, Peters, Sander, van Staveren, Marjo, Datema, Erwin, Fiers, Mark W E J, van Ham, Roeland C H J, Lindhout, P, Philippot, Murielle, Frasse, Pierre, Regad, Farid, Zouine, Mohamed, Bouzayen, Mondher, Asamizu, Erika, Sato, Shusei, Fukuoka, Hiroyuki, Tabata, Satoshi, Shibata, Daisuke, Botella, Miguel A, PerezAlonso, M, FernandezPedrosa, V, Osorio, Sonia, Mico, Amparo, Granell, Antonio, Zhang, Zhonghua, He, Jun, Huang, Sanwen, Du, Yongchen, Qu, Dongyu, Liu, Longfei, Liu, Dongyuan, Wang, Jun, Ye, Zhibiao, Yang, Wencai, Wang, Guoping, Vezzi, Alessandro, Todesco, Sara, Valle, Giorgio, Falcone, Giulia, Pietrella, Marco, Giuliano, Giovanni, Grandillo, Silvana, Traini, Alessandra, DAgostino, Nunzio, Chiusano, Maria Luisa, Ercolano, Mara, Barone, Amalia, Frusciante, Luigi, Schoof, Heiko, Joecker, Anika, Bruggmann, Remy, Spannagl, Manuel, Mayer, Klaus X F, Guigo, Roderic, Camara, Francisco, Rombauts, Stephane, Fawcett, Jeffrey A, Van de Peer, Yves, Knapp, Sandra, Zamir, Dani, Stiekema, Willem. A Snapshot of the Emerging Tomato Genome Sequence. PLANT GENOME[J]. 2009, 2(1): 78-92, https://doaj.org/article/1858359b6c874685a9198d615b63ad63.
[40] Lu, Fei, Ammiraju, Jetty S S, Sanyal, Abhijit, Zhang, Shengli, Song, Rentao, Chen, Jinfeng, Li, Guisheng, Sui, Yi, Song, Xiang, Cheng, Zhukuan, de Oliveira, Antonio Costa, Bennetzen, Jeffrey L, Jackson, Scott A, Wing, Rod A, Chen, Mingsheng. Comparative sequence analysis of MONOCULM1-orthologous regions in 14 Oryza genomes. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA[J]. 2009, 106(6): 2071-2076, http://dx.doi.org/10.1073/pnas.0812798106.
[41] Li, Changbao, Zhao, Jiuhai, Jiang, Hongling, Geng, Yu, Dai, Yuanyuan, Fan, HuaJie, Zhang, Dongfen, Chen, Jinfeng, Lu, Fei, Shi, Jinfeng, Sun, Shouhong, Chen, Jianjun, Yan, Xiaohua, Lu, Chen, Chen, Mingsheng, Cheng, Zhukuan, Ling, Hongqing, Wang, Ying, Xue, Yongbiao, Li, Chuanyou. A snapshot of the Chinese SOL Project. JOURNAL OF GENETICS AND GENOMICS[J]. 2008, 35(7): 387-390, http://dx.doi.org/10.1016/S1673-8527(08)60056-9.
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（1） 利用进化印迹鉴定水稻基因组的功能元件，主持，国家级，2013-01--2016-12
（2） 稻属基因组异染色质区域的进化，主持，国家级，2012-01--2015-12
（3） 基于全基因组序列的稻属比较基因组学研究 ，主持，其他级，2011-01--2013-12

已指导学生

刘铁燕  博士研究生  071007-遗传学  

吴玉峰  博士研究生  071007-遗传学  

隋毅  博士研究生  071007-遗传学  

鲁非  博士研究生  071007-遗传学  

崔海涛  博士研究生  071007-遗传学  

孙玉芬  硕士研究生  071007-遗传学  

杨璐  博士研究生  071007-遗传学  

陈金锋  博士研究生  071007-遗传学  

宋成丽  博士研究生  071007-遗传学  

廖毅  博士研究生  071007-遗传学  

张雪梅  博士研究生  071007-遗传学  

白泽涛  博士研究生  071021-生物信息学  

现指导学生

王美蛟  博士研究生  071007-遗传学  

田鹏  博士研究生  071007-遗传学  

杨群  博士研究生  0710J3-生物信息学  

刘阳  博士研究生  0710J3-生物信息学