Publications
1. Lu K., Guo Z., Di S., Rehmani M.I.S., Rong C., Ding Y., Li W.* Ding C. (2023) OsMFT1 inhibits seed germination under salt stress through modulating abscisic acid signaling and gibberellin biosynthesis in rice. Plant and Cell Physiology.
2. Hossain M.M., Sultana F., Li W., Tran L.-S.P., Mostofa M.G. (2023). Sclerotinia sclerotiorum (Lib.) de Bary: Insights into the pathogenomic features of a global pathogen. Cells. 12, 1063.
3. Zheng X., Liu F., Yang X., Li W., Chen S., Yue X., Jia Q., Sun X. (2023) The MAX2-KAI2 module promotes salicylic acid-mediated immune responses in Arabidopsis. Journal of Integrative Plant Biology. doi: 10.1111/jipb.13463. Online ahead of print.
4. Yang H., Li Y., Qiao Y., Sun H., Liu W., Qiao W., Li W., Liu M., Dong B. (2023). Low light stress promotes new tiller regeneration by changing source-sink relationship and activating expression of expansin genes in wheat. Plant, Cell & Environment. 2023;46:1562–1581.
5. Yi F., An G., Song A., Cheng K., Liu J., Wang C., Wu S., Wang P., Zhu J., Liang Z., Chang Y., Cai C., Zhang X., Wang P., Chen A., Chu Z., Xu J., Burritt D.J., Herrera-Estrella L., L.S.P.*, Li W.* Cai Y.* (2023). Strigolactones positively regulate Verticillium wilt resistance in cotton through crosstalk with other hormone signaling pathways. Plant Physiology. Online ahead of print.
6. Li L., Li L., Cui S., Qian D., Lyu S., Liu W., Botella J.R., Li H., Burritt D.J., Tran L.S.P., Li W.*, Zhang Y., (2023). PDC1 is activated by ABF4 and inhibits seed germination by promoting ROS accumulation in Arabidopsis. Environmental and Experimental Botany 206:105188.
7. Mostofa M.H., Abdelrahman M., Rahman M.M., Tran C.D., Nguyen K.H., Watanabe Y., Itouga M., Li W., Wang Z., Mochida K., Tran L.-S.P. (2022). Karrikin receptor KAI2 coordinates salt tolerance mechanisms in Arabidopsis thaliana. Plant and Cell Physiology. 63(12):1927-1942. (2区)
8. Abdelrahman M., Mostofa M.H., Tran C.D., El-sayed M., Li W., Sulieman S., Tanaka M., Seki M., Tran L.-S.P. (2022). The karrikin receptor KARRIKIN INSENSITIVE2 positively regulates heat stress tolerance in Arabidopsis thaliana. Plant and Cell Physiology. 63(12):1914-1926. (2区)
9. Feng Z., Liang X., Tian H., Watanabe Y., Nguyen K.H., Tran C.D., Abdelrahman M., Xu K., Mostofa M.G., Ha C.V., Mochida K., Tian C., Tanaka M., Seki M., Liang Z., Miao Y., Tran L.-S.P., and Li W.* (2022). SUPPRESSOR of MAX2 1 (SMAX1) and SMAX1-LIKE2 (SMXL2) negatively regulate drought resistance in Arabidopsis thalian. Plant and Cell Physiology. 63(12):1900-1913. (2区)
10. Li W., Sun Y., Li K., Tian H., Jia J., Zhang H., Wang Y., Wang H., Bi B., Guo J., Tran L.-S.P. and Miao Y., (2022). Sinapate esters mediate UV-B-induced stomatal closure by regulating nitric oxide, hydrogen peroxide, and malate accumulation in Arabidopsis thaliana. Plant and Cell Physiology. 63(12):1890-1899.
11. Zhao, J., Deng, X., Qian, J., Liu, T., Ju, M., Li, J., Yang, Q., Zhu, X., Li, W., Liu, C.J., Jin, Z., and Zhang, K. (2022). Arabidopsis ABCG14 forms a homodimeric transporter for multiple cytokinins and mediates long-distance transport of isopentenyladenine-type cytokinins. Plant Communication, 100468.
12. Ha C.V. Mostofa M.G., Nguyen K.H., Tran C. D., Watanabe Y., Li W., Osakabe Y., Sato Mayuko, Toyooka K., Tanaka M., Seki M., Burritt D.J., Anderson C., Zhang R. Nguyen H. M., Le V.Ph. Bui H. T., Mochida K., Tran L.-S.P. The histidine phosphotransfer AHP4 plays a negative role in Arabidopsis plant response to drought. The Plant Journal. 111(6):1732-1752. (1区)
13. Yu L., Liu S., Wang F., Liu Y., Wang Q., Tran L.-S.P. Dong Y., Li W. Strategies for agricultural production management based on land, water and carbon footprints on the Qinghai-Tibet Plateau. Journal of Cleaner Production. 362: 132563. (1区)
14. Sun H., Li W.*, Burritt D.J., Tian H., Zhang H., Liang X., Miao Y., Mostofa M.G and Tran L.-S.P. (2022). Strigolactones interact with other phytohormones in modulating root growth and development in plants. Crop Journal, 10(6): 1517-1527. (1区)
15. Tian H., Watanabe Y., Nguyen K.H., Tran C.D., Abdelrahman M. Liang X., Xu K., Sepulveda C., Mostofa M.G., Ha C.V, Nelson D.C., Mochida K., Tian C., Tanaka M., Seki M., Miao Y., Tran L.-S.P., and Li W.* (2022) KARRIKIN UPREGULATED F-BOX 1 negatively regulates drought resistance in Arabidopsis thaliana. Plant Physiology. 190: 2671–2687.
16. Luo Y., Wang Y., Xie Y., Gao Y., Li W., and Lang S. (2022). Transcriptomic and metabolomic analyses of the effects of exogenous trehalose on heat tolerance in wheat. Int. J. Mol. Sci. 2022, 23. (2区)
17. Yang F, Miao Y, Liu Y, Botella JR, Li W., Li K and Song C-P (2022). Function of Protein Kinases in Leaf Senescence of Plants. Front. Plant Sci. 13:864215. (2区, 小类1区)
18. Li K., Jia Q., Guo J., Zhu Z., Shao M., Wang J., Li W., Dai J., Guo M., Li R., Song J., Yang F., Du J., Botell J.R., Song C.P., Maio Y. (2022). The high chlorophyll fluorescence 244 (HCF244) is potentially involved in glutathione peroxidase 7-regulated high light stress in Arabidopsis thaliana. Environmental and Experimental Botany. 195: 104767. (2区, 小类1区)
19. Yu L., Liu S., Wang F., Liu Y., Li M., Wang Q., Dong S., Zhao W., Tran L.S.P., Sun Y., Li W., Dong Y., Beazley R., Qiang H., (2022). Effects of agricultural activities on energy-carbon-water nexus of the Qinghai-Tibet Plateau. Journal of Cleaner Production. 331: 129995. (1区)
20. Luo Y., Xie Y., Li W., Wei M., Dai T., Li Z., Wang B. (2021) Physiological and transcriptomic analyses reveal exogenous trehalose is involved in the responses of wheat roots to high temperature stress. Plants 2021, 10, 2644 (3区)
21. Abdelrahman M. Nishiyama R., Tran C.D., Kusano M., Nakabayashi R., Okazaki Y., Matsuda F., Montes R.A.C., Mostofa M.G., Li W., Watanabe Y., Fukushima A., Tanaka M., Seki M., Saito K. Herrera-Estrella L., Tran L.S.P. (2021). Defects in the cytokinin signaling reprogram lipid and flavonoid gene-to-metabolite networks to mitigate the effects of salinity in Arabidopsis thaliana. Proceedings of the National Academy of Sciences of the United States of America. 118: 48 e2105021118 (1区)
22. Sun Y., Tian L., Chang, J. Shi S., Zhang J., Xie H., Cai Y., Chen D., Kuramae E.E, van Veen J.A., Li W.*, Tran L.S.P., Tian C. (2021). Rice domestication influences the composition and function of the rhizosphere bacterial chemotaxis systems. Plant and Soil. doi: 10.1007/s11104-021-05036-2 (2区)
23. Luo Y., Liu X., Li W. (2021). Exogenously-supplied trehalose inhibits the growth of wheat seedlings under high temperature by affecting plant hormone levels and cell cycle processes. Plant Signaling & Behavior, DOI: 10.1080/15592324.2021.1907043. (4区)
24. Zhang S., Guo Y., Zhang Y., Guo J., Li K., Fu W., Jia Z., Li W., Tran L.S.P., Jia K., Miao Y. (2021). Genome‑wide identifcation, characterization and expression profles of the CCD gene family in Gossypium species. 3 Biotech 11:249. (4区)
25. Liu S., Sun Y., Wu X., Li W., Liu Y., Tran L.S.P. (2021). Driving factor analysis of ecosystem service balance for watershed management in the Lancang River Valley, Southwest China. Land 10, 522. DOI: 10.1007/s13205-021-02805-9 (3区)
26. Mostofa M.G., Rahman M.M., Kien Huu Nguyen K.H., Li W., Watanabe Y., Tran C.D., Zhang M., Misao Itouga M., Fujita M., Tran L.S.P. (2021). Strigolactones regulate arsenate uptake, vacuolar-sequestration and antioxidant defense responses to resist arsenic toxicity in rice roots. Journal of Hazardous Materials. 415, 125589. (1区)
27. Shao Y., Feng X., Otie V., Li W., Irshad M., Zheng Y., Qiman Y., An P. (2021). Differential responses of roots for varying tolerance to salinity stress in wheat with special reference to elasticity. Plant Growth Regulation. 94, 83–193 (3区)
28. Echeverria A., Larrainzar E., Li W., Watanabe Y., Sato M., Hirai MY., Sawada Y., Moler J.A., Tran L.S.P., Gonzalez E.M. (2021). Medicago sativa and Medicago truncatula show contrasting root metabolic responses to drought. Front in Plant Science. 12:652143. doi: 10.3389/fpls.2021.652143 (2区)
29. Patel M.K., Kumar M., Li W., Luo Y., Burritt D.J., Alkan N., Tran L.S.P. (2020). Enhancing salt tolerance of plants: From metabolic reprogramming to exogenous chemical treatments and molecular approaches. Cells. 9, 2492. doi:10.3390/cells9112492 (3区)
30. Niu L., Chu H.D., Tran C.D., Nguyen K.H. Pham, H.X. Le D.T., Li W. Wang W., Le T.D. Tran L.S.P. (2020). The GATA gene family in chickpea: structure analysis and transcriptional responses to abscisic acid and dehydration treatments revealed potential genes involved in drought adaptation. Journal of Plant Growth Regulation. 39:1647-1660. (3区)
31. Nasir F., Li W., Tran L.S.P., Tian C. (2020). Does karrikin signaling recruit rhizomicrobiome via strigolactone pathway? Trends in Plant Science. 25, 1184-1187 (1区)
32. Yin X., Fan H., Chen Y., Li L.Z., Song W., Fan Y., Zhou W., Ma G., Alolga R.N., Li W., Zhang B., Li P., Tran L.S.P., Lu X., Qi L.W. (2020). Integrative omic and transgenic analyses reveal the positive effect of ultraviolet-B irradiation on salvianolic acid biosynthesis through up-regulation of SmNAC1. Plant J. 104(3), 781-799. DOI: 10.1111/tpj.14952. IF=6.1 (1区)
33. Li W., Gupta A., Tian H., Nguyen K.H., Tran C.D., Watanabe Y., Tian C., Li K., Yang Y., Guo J., Luo Y., Miao Y., Tran L.S.P. (2020). Different strategies of strigolactone and karrikin signals in regulating the resistance of Arabidopsis thaliana to water-deficit stress. Plant Signaling & Behavior. 15(9), 1789321. doi.org/10.1080/15592324.2020.1789321. (4区)
34. Liu Z., Zhou Y., Guo J., Li J., Tian Z., Zhu Z., Wang J., Wu R., Zhang B., Hu Y., Sun Y., Shangguan Y., Li W., Li T., Hu Y., Guo C., Rochaix J.D., Miao Y., Sun X. (2020). Global dynamic molecular profiles of stomatal lineage dell development by single-cell RNA sequencing. Molecular Plant. 13, 1178-1193. DOI: https://doi.org/10.1016/j.molp.2020.06.010. (1区)
35. Nasir F., Tian L., Li J., Luo S., Batool A., Bahadur A., Li W., Gao Y., Tian C. (2020). In-silico transcriptome study of the rice (Oryza sativa) strigolactone-deficent (dwarf17) mutant reveal a potential link of strigolactones with various stress-associated pathways. Pakistan Journal of Botany. 52(6). DOI: 10.30848/PJB2020-6(6) (4区)
36. Zhang P., Wang R., Yang X., Ju Q., Li W., Lü S., Tran L.S.P., Xu J. (2020). The R2R3-MYB transcription factor AtMYB49 modulates salt tolerance in Arabidopsis by modulating the cuticle formation and antioxidant defense. Plant, Cell & Environment. 43:1925-1943. DOI: 10.1111/pce.13784 (1区)
37. Sun Y., Liu Z., Guo J., Zhu Z., Zhou Y., Guo C., Hu Y., Li J., Shangguan Y., Li T., Hu Y., Wu R., Li W., Rochaix J.D., Miao Y., Sun X. (2020). WRKY33-PIF4 loop is required for the regulation of H2O2 homeostasis. Biochemical and Biophysical Research Communications. 527:847-1072. DOI: 10.1016/ j.bbrc.2020.05.041 (3区)
38. Li W., Nguyen K.H., Tran C.D., Watanabe Y., Tian C., Yin X., Li K., Yang Y., Guo J., Miao Y., Yamaguchi S., Tran L.-S.P. (2020). Negative roles of strigolactone-related SMXL6, 7 and 8 proteins in drought resistance in Arabidopsis. Biomolecules, 10: 607. (2区)
39. Li W., Nguyen KH., Chu HD, Watanabe Y., Osakabe Y., Sato M., Toyooka K., Seo M., Tian L., Tian C., Yamaguchi S., Tanaka M., Seki M., Tran LSP. (2020). Comparative functional analyses of DWARF14 and KARRIKIN INSENSITIVE2 in drought adaptation of Arabidopsis thaliana. Plant J. 103, 111-127. DOI: 10.1111/tpj.14712. IF=6.1 (1区)
40. Li W., Herrera-Estrella L., Tran LSP. (2019). Do cytokinins and strigolactones crosstalk during drought adaptation? Trends in Plant Science. 24: 669-672. IF=14
41. Zhang P., Wang R., Ju Q., Li W., Tran L.S.T, Xu J. (2019). The R2R3-MYB transcription factor MYB49 regulates cadmium accumulation. Plant Physiology. 180: 529-542. IF= 5.95
42. Li W., Nguyen KH., Ha CV., Watanabe Y., Tran LS. (2019). Crosstalk between the cytokinin and MAX2 signaling pathways in growth and callus formation of Arabidopsis thaliana. Biochemical and Biophysical Research Communications. 511: 300-306. IF=2.5
43. Seto Y., Yasui R., Kameoka H., Tamiru M., Cao M., Terauchi R., Sakurada A., Hirano R., Kisugi T., Hanada A., Umehara M., Seo E., Akiyama K., Burke J., Takeda-Kamiya N., Li W., Hirano Y., Hakoshima T., Mashiguchi K., Noel J.P., Kyozuka J., Yamaguchi S. (2019). Strigolactone perception and deactivation by a hydrolase receptor DWARF14. Nature Communications. 10, 191.
44. Chang C., Tian L., Ma L., Li W., Nasir F., Li X., Tran LSP., Tian C. (2019). Differential responses of molecular mechanisms and physiochemical characters in wild and cultivated soybeans against invasion by the pathogenic Fusarium oxysporum Schltdl. Physiologia Plantarum 166: 1008-1025.
45. Shi S., Tian L., Nasir F., Li X., Li W., Tran LSP., Tian C. (2018). Impact of domestication on the evolution of rhizomicrobiome of rice in response to the presence of Magnaporthe oryzae. Plant Physiology and Biochemistry.132:156-165. IF=2.7
46. Mostofa M., Li W., Nguyen, K., Fujita, M., Tran LSP. (2018). Strigolactones in plant adaptation to abiotic stresses: an emerging avenue of plant research. Plant, Cell & Environment. 1-17, https:// doi.org/10.1111/pce.13364 IF=6.2.
47. Li W., Nishiyama R., Watanabe Y., Ha CV., Kojima M., An P., Tian L., Tian C., Sakakibara H., Tran LSP., (2018). Effects of overproduced ethylene on the contents of other phytohormones and expression of their key biosynthetic genes. Plant Physiology and Biochemistry. 128:170-177. IF=2.7.
48. Tian L., Shi S., Nasir F., Chang C. Li W., Tran LSP., Tian C. (2018). Comparative analysis of the root transcriptomes of cultivated and wild rice varieties in response to Magnaporthe oryzae infection revealed both common and species-specific pathogen responses. Rice. 11: 26. doi.org/10.1186/s12284-018-0211-8. IF=3.7
49. Nguyena KH., Mostofa MG., Li W., Ha CV., Watanab Y., Le DT., Thao NP., Tran LSP. (2018). The soybean transcription factor GmNAC085 enhances drought tolerance in Arabidopsis. Environmental and Experimental Botany. 151, 12-20. IF=4.3
50. Li W., Nguyen KH, Chu HD, Ha CV, Watanabe Y, Osakabe Y, Leyva-González MA, Sato M, Toyooka K, Voges L, Tanaka M, Seki M, Seo M, Yamaguchi S, Nelson DC, Tian C, Herrera-Estrella L, Tran LSP. (2017). The karrikin receptor KAI2 promotes drought resistance in Arabidopsis thaliana. Plos Genetics. 13(11): e1007076. IF=7.2. 该论文被Science杂志推荐阅读。Science2017, Vol 358, Issue 6368:1267-1268.
51. Li W., Nguyen KH, Watanabe Y, Yamaguchi S, Tran LS. (2016). OaMAX2 of Orobanche aegyptiaca and Arabidopsis AtMAX2 share conserved functions in both development and drought responses. Biochemical and Biophysical Research Communications. 16, 478:521-526. doi: 10.1016/j.bbrc.2016.07.065. IF=2.5
52. Li W., Herrera-Estrella L., Tran LSP. (2016). The yin-and-yang of cytokinin homeostasis and drought acclimation/adaptation. Trends in Plant Science. 21, 548-550 IF=12.9
53. Li W. Yamaguchi S. Khan MA., An. P., Liu X., Tran LSP. (2016). Roles of gibberellins and abscisic acid in regulating germination of Suaeda salsa dimorphic seeds under salt stress. Front in Plant Science. 6:1235. IF=3.9
54. Nguyen KH, Ha CV, Nishiyama R, Watanabe Y, Leyva-González MA, Fujita Y, Tran UT, Li W., Tanaka M, Seki M, Schaller GE, Herrera-Estrella L, Tran LP. (2016). Arabidopsis type B cytokinin response regulators ARR1, ARR10, and ARR12 negatively regulate plant responses to drought. Proceedings of the National Academy of Sciences of the United States of America. pii: 201600399. IF=9.7
55. Li W. and Tran L.S.P. (2015). Are karrikins involved in plant abiotic stress responses? Trends in Plant Science. 20, 535-538. IF=12.9
56. Li W., Yoshida A, Takahashi M, Maekawa M, Kojima M, Sakakibara H, Kyozuka J. (2015). SAD1, an RNA polymerase I subunit A34.5 of rice, interacts with Mediator and controls various aspects of plant development. Plant Journal. 81(2):282-91. IF=6.8
57. Li W., Khan M.A., Yamaguchi S., Liu X. (2015). Hormonal and environmental regulation of seed germination in salt cress (Thellungiella halophila). Plant Growth Regulation. 76:41-49, IF=2.6
58. Umehara M., Cao M., Akiyama K., Akatsu T., Seto Y., Hanada A., Li W., Takeda-Kamiya N., Morimoto Y., Yamaguchi S. (2015). Structural requirements of strigolactones for shoot branching inhibition in rice and Arabidopsis. Plant and Cell Physiology. 56:1059-1072. IF=4.9
59. Luo L., Li W., Miura K., Ashikari M., Kyozuka J. (2012). Control of Tiller Growth of Rice by OsSPL14 and Strigolactones, which Work in Two Independent Pathways. Plant and Cell Physiology. 53:1793-1801. IF=4.9
60. Li W., Liu X.J., Hanada a., Khan M.A. (2011). Effect of cold stratification, scarification and hormones on germination of dimorphic seeds of Atriplex centralasiatica under saline conditions. Seed Science & Technology. 39:82-92. IF=0.7
61. Li W., Khan M.A., Zhang X.M, Liu X.J. (2010). Rooting and shoot growth of stems cuttings of saltcedar (Tamarix Chinesis Lour) under salt stress. Pakistan Journal of Botany. 42:4133-4141 IF=0.8
62. Khan MA, Ansari R, Gul B, Li W. (2009). Dormancy and germination responses of halophyte seeds to the application of ethylene. Comptes Rendus Biologies. 332(9):806-815. IF=1.1
63. Goda H., Sasaki E., Akiyama K., Maruyama-Nakashita A., Nakabayashi K., Li W., Ogawa M., Yamauchi Y., Preston J., Aoki K., Kiba T., Takatsuto S., Fujioka S., Asami T., Nakano T., Kato H., Mizuno T., Sakakibara H., Yamaguchi S., Nambara E., Kamiya Y., Takahashi H., Sakurai T., Shinozaki K., Saito K., Yoshida S. Shimada Y, (2008). The AtGenExpress hormone- and chemical-treatment data set: Experimental design, data evaluation, model data analysis, and data access, The Plant Journal. 55(3), 526-542. IF=6.8.
64. Li W., An P., Liu X., Khan M.A. and Tanaka K, (2008). The effect of light, temperature and bracteoles on germination of polymorphic seeds of Atriplex centralasiatica under saline conditions, Seed Science & Technology, 36 (2), 325-338, IF=0.6
65. Li W., An P. and Liu X, (2008). Effect of storage, stratification, temperature and gibberellins on germination of dimorphic seeds of Suaeda salsa under saline conditions, Seed Science & Technology, 36 (1), 122-132, IF=0.6
66. Li W., Liu X., Khan M.A. and Gul B., (2008). Relationship between soil characteristics and halophytic vegetation in coastal region of north China, Pakistan Journal of Botany, 40(3) 1081-1090, IF=0.8
67. Li Z., Liu X., Zhang X., and Li W., Infiltration of melting saline ice water in soil columns: Consequences on soil moisture and salt content, Agricultural Water Management, 95(4), 498-502. April, 2008 IF=1.9
68. Duan D., Li W., Liu X., Ouyang H., An P., (2007). Seed germination and seedling growth of Suaeda salsa under salt stress. Ann. Bot. Fennici, 44:161-169, IF=0.7
69. Shaikh F., Gul B. Li W. Liu X. and Khan M.A. (2007). Effect of calcium and light on the germination of Urochondra setulosa under different salts. Journal of Zhejiang University SCIENCE B. 8(1):20-26. (Corresponding author) .IF=0.4
70. Yang Y., Liu X. Li W. and Li C. (2006). Effect of different mulch materials on winter wheat production in desalinized soil in Heilonggang region of North China. Journal of Zhejiang University SCIENCE B. 7(11):858-867. IF=0.4
71. Li W., Liu X., Khan, M.A., Kamiya, Y. and Yamaguchi, S., (2005). Effects of phytohormones and some environment factors on germination of flixweed (Descurainia sophia). Plant Growth Regulation. 118:207-214, IF=2.6
72. Li, W., Khan, M.A., Yamaguchi, S., and Kamiya, Y. (2005). Effects of heavy metals on seed germination and early seedling growth of Arabidopsis thaliana. Plant Growth Regulation, 46: 45-50, IF=2.6
73. Li, W., Liu, X.J., Khan, M.A., and Yamaguchi, S.,(2005). The effect of plant growth regulators, nitric oxide, nitrate, nitrite and light on the germination of dimorphic seeds of Suaeda salsa under saline conditions. Journal of Plant Research. 118: 207-214. IF=2.5
74. Liu X, Yang Y, Li W, Li C, Duan D, Tadano T. (2005). Interactive effects of sodium chloride and nitrogen on growth and ion accumulation of a halophyte. Communications in Soil Science and Plant Analysis. 35: 2111-2123, IF=0.5
75. Shen Y., Kondoh A., Tang C., Zhang Y., Chen J., Li W., Sakura Y., Liu C., Tanaka T., Shimada J., (2002). Measurement and analysis of evapotranspiration and surface conductance of a wheat canopy. Hydrological processes 16 (11): 2173-2187, IF=2.5
Students
现指导学生
聂小繁 硕士研究生 090102-作物遗传育种
朱晨博 博士研究生 071300-生态学