发表论文
[1] Wang, Qintao, Feng, Yanbin, Lu, Yandu, Xin, Yi, Shen, Chen, Wei, Li, Liu, Yuxue, Lv, Nana, Du, Xuefeng, Zhu, Wenqiang, Jeong, Byeongryool, Xue, Song, Xu, Jian. Manipulating fatty-acid profile at unit chain-length resolution in the model industrial oleaginous microalgae Nannochloropsis. METABOLIC ENGINEERING[J]. 2021, 66: 157-166, http://dx.doi.org/10.1016/j.ymben.2021.03.015.[2] Wang, Qintao, Gong, Yanhai, He, Yuehui, Xin, Yi, Lv, Nana, Du, Xuefeng, Li, Yun, Jeong, ByeongRyool, Xu, Jian. Genome engineering of Nannochloropsis with hundred-kilobase fragment deletions by Cas9 cleavages. PLANT JOURNAL[J]. 2021, 106(4): 1148-1162, http://dx.doi.org/10.1111/tpj.15227.[3] He, Yuehui, Huang, Shi, Zhang, Peng, Ji, Yuetong, Xu, Jian. Intra-Ramanome Correlation Analysis Unveils Metabolite Conversion Network from an Isogenic Population of Cells. MBIO[J]. 2021, 12(4): http://apps.webofknowledge.com/CitedFullRecord.do?product=UA&colName=WOS&SID=5CCFccWmJJRAuMzNPjj&search_mode=CitedFullRecord&isickref=WOS:000694734900003.[4] Bhaskar, Yogendra, Su, Xiaoquan, Xu, Chenggang, Xu, Jian. Predicting Selective RNA Processing and Stabilization Operons in Clostridium spp.. FRONTIERS IN MICROBIOLOGY[J]. 2021, 12: http://dx.doi.org/10.3389/fmicb.2021.673349.[5] Chen, Guangyu E, Hitchcock, Andrew, Mares, Jan, Gong, Yanhai, Tichy, Martin, Pilny, Jan, Kovarova, Lucie, Zdvihalova, Barbora, Xu, Jian, Hunter, C Neil, Sobotka, Roman. Evolution of Ycf54-independent chlorophyll biosynthesis in cyanobacteria. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA[J]. 2021, 118(10): https://www.webofscience.com/wos/woscc/full-record/WOS:000627429100102.[6] Gongchao Jing, Lu Liu, Zengbin Wang, Yufeng Zhang, Li Qian, Chunxiao Gao, Meng Zhang, Min Li, Zhenkun Zhang, Xiaohan Liu, Jian Xu, Xiaoquan Su. Microbiome Search Engine 2: a Platform for Taxonomic and Functional Search of Global Microbiomes on the Whole-Microbiome Level. MSYSTEMS[J]. 2021, 6(1): https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7820668/.[7] Jing, Gongchao, Zhang, Yufeng, Cui, Wenzhi, Liu, Lu, Xu, Jian, Su, Xiaoquan. Meta-Apo improves accuracy of 16S-amplicon-based prediction of microbiome function. BMC GENOMICS[J]. 2021, 22(1): https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7788972/.[8] Jing, Xiaoyan, Gong, Yanhai, Xu, Teng, Meng, Yu, Han, Xiao, Su, Xiaolu, Wang, Jianmei, Ji, Yuetong, Li, Yuandong, Jia, Zhongjun, Ma, Bo, Xu, Jian. One-Cell Metabolic Phenotyping and Sequencing of Soil Microbiome by Raman-Activated Gravity-Driven Encapsulation (RAGE). MSYSTEMS[J]. 2021, 6(3): http://dx.doi.org/10.1128/mSystems.00181-21.[9] Xu, Teng, Han, Xiao, Zhu, Pengfei, Dai, Jing, Liu, Min, Liu, Yang, Xu, Jian, Ma, Bo. A milliliter to picoliter-level centrifugal microfluidic concentrator for fast pathogen detection and antimicrobial susceptibility testing. SENSORS AND ACTUATORS B-CHEMICAL[J]. 2021, 343: http://dx.doi.org/10.1016/j.snb.2021.130117.[10] Baladehi, Mohammadhadi Heidari, Hekmatara, Maryam, He, Yuehui, Bhaskar, Yogendra, Wang, Zengbin, Liu, Lu, Ji, Yuetong, Xu, Jian. Culture-Free Identification and Metabolic Profiling of Microalgal Single Cells via Ensemble Learning of Ramanomes. ANALYTICAL CHEMISTRY[J]. 2021, 93(25): 8872-8880, http://dx.doi.org/10.1021/acs.analchem.1c01015.[11] Shi Huang, Tao He, Feng Yue, Xiujun Xu, Lijiang Wang, Pengfei Zhu, Fei Teng, Zheng Sun, Xiaohui Liu, Gongchao Jing, Xiaoquan Su, Lijian Jin, Jiquan Liu, Jian Xu. Longitudinal Multi-omics and Microbiome Meta-analysis Identify an Asymptomatic Gingival State That Links Gingivitis, Periodontitis, and Aging. MBIO[J]. 2021, 12(2): https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8092283/.[12] Hekmatara, Maryam, Baladehi, Mohammadhadi Heidari, Ji, Yuetong, Xu, Jian. D2O-Probed Raman Microspectroscopy Distinguishes the Metabolic Dynamics of Macromolecules in Organellar Anticancer Drug Response. ANALYTICAL CHEMISTRY[J]. 2021, 93(4): 2125-2134, https://www.webofscience.com/wos/woscc/full-record/WOS:000618089100032.[13] You, Wuxin, Wei, Li, Gong, Yanhai, El Hajjami, Mohamed, Xu, Jian, Poetsch, Ansgar. Integration of proteome and transcriptome refines key molecular processes underlying oil production inNannochloropsis oceanica. BIOTECHNOLOGY FOR BIOFUELS[J]. 2020, 13(1): http://dx.doi.org/10.1186/s13068-020-01748-2.[14] Zhang, Jia, Wang, Yefei, Chai, Baihui, Wang, Jichao, Li, Lulu, Liu, Min, Zhao, Guang, Yao, Lishan, Gao, Xiaolian, Yin, Yifeng, Xu, Jian. Efficient and Low-Cost Error Removal in DNA Synthesis by a High-Durability MutS. ACS SYNTHETIC BIOLOGY[J]. 2020, 9(4): 940-952, https://www.webofscience.com/wos/woscc/full-record/WOS:000526886400022.[15] Wei, Li, You, Wuxin, Gong, Yanhai, El Hajjami, Mohamed, Liang, Wensi, Xu, Jian, Poetsch, Ansgar. Transcriptomic and proteomic choreography in response to light quality variation reveals key adaption mechanisms in marine Nannochloropsis oceanica. SCIENCE OF THE TOTAL ENVIRONMENT[J]. 2020, 720: http://dx.doi.org/10.1016/j.scitotenv.2020.137667.[16] Su, Xiaolu, Gong, Yanhai, Gou, Honglei, Jing, Xiaoyan, Xu, Teng, Zheng, Xiaoshan, Chen, Rongze, Li, Yuandong, Ji, Yuetong, Ma, Bo, Xu, Jian. Rational Optimization of Raman-Activated Cell Ejection and Sequencing for Bacteria. ANALYTICAL CHEMISTRY[J]. 2020, 92(12): 8081-8089, http://dx.doi.org/10.1021/acs.analchem.9b05345.[17] Gong, Yanhai, Kang, Nam K, Kim, Young U, Wang, Zengbin, Wei, Li, Xin, Yi, Shen, Chen, Wang, Qintao, You, Wuxin, Lim, JongMin, Jeong, SukWon, Park, YounIl, Oh, HeeMock, Pan, Kehou, Poliner, Eric, Yang, Guanpin, LiBeisson, Yonghua, Li, Yantao, Hu, Qiang, Poetsch, Ansgar, Farre, Eva M, Chang, Yong K, Jeong, WonJoong, Jeong, Byeongryool, Xu, Jian. The NanDeSyn database for Nannochloropsis systems and synthetic biology. PLANT JOURNAL[J]. 2020, 104(6): 1736-1745, http://dx.doi.org/10.1111/tpj.15025.[18] Xiaoquan Su, Gongchao Jing, Zheng Sun, Lu Liu, Zhenjiang Xu, Daniel McDonald, Zengbin Wang, Honglei Wang, Antonio Gonzalez, Yufeng Zhang, Shi Huang, Gavin Huttley, Rob Knight, Jian Xu. Multiple-Disease Detection and Classification across Cohorts via Microbiome Search. MSYSTEMS[J]. 2020, 5(2): https://doaj.org/article/c0603b437334460fa045b6809c7a7448.[19] Xu, Teng, Gong, Yanhai, Su, Xiaolu, Zhu, Pengfei, Dai, Jing, Xu, Jian, Ma, Bo. Phenome-Genome Profiling of Single Bacterial Cell by Raman-Activated Gravity-Driven Encapsulation and Sequencing. SMALL[J]. 2020, 16(30): https://www.webofscience.com/wos/woscc/full-record/WOS:000538997700001.[20] Wang, Xixian, Xin, Yi, Ren, Lihui, Sun, Zheng, Zhu, Pengfei, Ji, Yuetong, Li, Chunyu, Xu, Jian, Ma, Bo. Positive dielectrophoresis-based Raman-activated droplet sorting for culture-free and label-free screening of enzyme function in vivo. SCIENCE ADVANCES[J]. 2020, 6(32): https://www.webofscience.com/wos/woscc/full-record/WOS:000560452300026.[21] Liu, Fengyi, Xu, Teng, Liu, Wenjing, Zheng, Xiaoshan, Xu, Jian, Ma, Bo. Spontaneous droplet generation via surface wetting. LAB ON A CHIP[J]. 2020, 20(19): 3544-3551, https://www.webofscience.com/wos/woscc/full-record/WOS:000573314400002.[22] Jing, Gongchao, Zhang, Yufeng, Yang, Ming, Liu, Lu, Xu, Jian, Su, Xiaoquan. Dynamic Meta-Storms enables comprehensive taxonomic and phylogenetic comparison of shotgun metagenomes at the species level. BIOINFORMATICS[J]. 2020, 36(7): 2308-2310, https://www.webofscience.com/wos/woscc/full-record/WOS:000536489400061.[23] Xin, Yi, Shen, Chen, She, Yiting, Chen, Hong, Wang, Cong, Wei, Li, Yoon, Kangsup, Han, Danxiang, Hu, Qiang, Xu, Jian. Biosynthesis of Triacylglycerol Molecules with a Tailored PUFA Profile in Industrial Microalgae. MOLECULAR PLANT[J]. 2019, 12(4): 474-488, http://dx.doi.org/10.1016/j.molp.2018.12.007.[24] Xiaoquan Su, Gongchao Jing, Daniel McDonald, Honglei Wang, Zengbin Wang, Antonio Gonzalez, Zheng Sun, Shi Huang, Jose Navas, Rob Knight, Jian Xu. Reply to Sun et al., "Identifying Composition Novelty in Microbiome Studies: Improvement of Prediction Accuracy". MBIO[J]. 2019, 10(4): https://doaj.org/article/ea24140af4fc4353acaf350aad0d97ae.[25] Yi Xin, Chen Shen, Yiting She, Hong Chen, Cong Wang, Li Wei, Kangsup Yoon, Danxiang Han, Qiang Hu, Jian Xu. Biosynthesis of Triacylglycerol Molecules with a Tailored PUFA Profile in Industrial Microalgae. 分子植物:英文版[J]. 2019, 12(4): 474-488, http://lib.cqvip.com/Qikan/Article/Detail?id=7001970880.[26] Ileana M Cristea, Pieter C Dorrestein, Jonathan A Eisen, Jack A Gilbert, Julie A Huber, Janet K Jansson, Rob Knight, Katherine S Pollard, Jeroen Raes, Pamela A Silver, Nicole S Webster, Jian Xu. Early-Career Scientists Shaping the World. MSYSTEMS[J]. 2019, 4(3): https://doaj.org/article/6e2e099a5bd94ecc911b05acbaf70fbb.[27] He, Yuehui, Wang, Xixian, Ma, Bo, Xu, Jian. Ramanome technology platform for label-free screening and sorting of microbial cell factories at single-cell resolution. BIOTECHNOLOGY ADVANCESnull. 2019, 37(6): http://dx.doi.org/10.1016/j.biotechadv.2019.04.010.[28] Wei, Li, Shen, Chen, El Hajjami, Mohamed, You, Wuxin, Wang, Qintao, Zhang, Peng, Ji, Yuetong, Hu, Hanhua, Hu, Qiang, Poetsch, Ansgar, Xu, Jian. Knockdown of carbonate anhydrase elevates Nannochloropsis productivity at high CO2 level. METABOLIC ENGINEERING[J]. 2019, 54(1): 96-108, http://dx.doi.org/10.1016/j.ymben.2019.03.004.[29] Wei, Li, El Hajjami, Mohamed, Shen, Chen, You, Wuxin, Lu, Yandu, Li, Jing, Jing, Xiaoyan, Hu, Qiang, Zhou, Wenxu, Poetsch, Ansgar, Xu, Jian. Transcriptomic and proteomic responses to very low CO2 suggest multiple carbon concentrating mechanisms in Nannochloropsis oceanica. BIOTECHNOLOGY FOR BIOFUELS[J]. 2019, 12(1): http://dx.doi.org/10.1186/s13068-019-1506-8.[30] Zheng Sun, Shi Huang, Pengfei Zhu, Feng Yue, Helen Zhao, Ming Yang, Yueqing Niu, Gongchao Jing, Xiaoquan Su, Huiying Li, Chris Callewaert, Rob Knight, Jiquan Liu, Ed Smith, Karl Wei, Jian Xu. A Microbiome-Based Index for Assessing Skin Health and Treatment Effects for Atopic Dermatitis in Children. MSYSTEMS[J]. 2019, 4(4): http://dx.doi.org/10.1128/mSystems.00293-19.[31] Cui, Xiaonan, Ren, Lihui, Shan, Yufei, Wang, Xixian, Yang, Zhenlong, Li, Chunyu, Xu, Jian, Ma, Bo. Smartphone-based rapid quantification of viable bacteria by single-cell microdroplet turbidity imaging. ANALYST[J]. 2018, 143(14): 3309-3316, https://www.webofscience.com/wos/woscc/full-record/WOS:000438056400006.[32] Xiaoquan Su, Gongchao Jing, Daniel McDonald, Honglei Wang, Zengbin Wang, Antonio Gonzalez, Zheng Sun, Shi Huang, Jose Navas, Rob Knight, Jian Xu. Identifying and Predicting Novelty in Microbiome Studies. MBIO[J]. 2018, 9(6): https://doaj.org/article/da0e9334eb704b83900a61ed81b041f6.[33] Sturme, Mark H J, Gong, Yanhai, Heinrich, Josue Miguel, Klok, Anne J, Eggink, Gerrit, Wang, Dongmei, Xu, Jian, Wijffels, Rene H. Transcriptome analysis reveals the genetic foundation for the dynamics of starch and lipid production in Ettlia oleoabundans. ALGAL RESEARCH-BIOMASS BIOFUELS AND BIOPRODUCTS[J]. 2018, 33: 142-155, http://dx.doi.org/10.1016/j.algal.2018.05.004.[34] Peng Xian, Zhou Xuedong, Xu Xin, Li Yuqing, Li Yan, Li Jiyao, Su Xiaoquan, Huang Shi, Xu Jian, Liao Ga. The Oral Microbiome Bank of China. INTERNATIONAL JOURNAL OF ORAL SCIENCE[J]. 2018, 10(2): 72-80, http://lib.cqvip.com/Qikan/Article/Detail?id=675766064.[35] Teng, Fei, Nair, Sree Sankar Darveekaran, Zhu, Pengfei, Li, Shanshan, Huang, Shi, Li, Xiaolan, Xu, Jian, Yang, Fang. Impact of DNA extraction method and targeted 16S-rRNA hypervariable region on oral microbiota profiling. SCIENTIFICREPORTS[J]. 2018, 8(1): https://doaj.org/article/9c6d2c6c827b4262816bb1d75a8713d9.[36] Ma, Chen, Sun, Zheng, Zeng, Benhua, Huang, Shi, Zhao, Jie, Zhang, Yong, Su, Xiaoquan, Xu, Jian, Wei, Hong, Zhang, Heping. Cow-to-mouse fecal transplantations suggest intestinal microbiome as one cause of mastitis. MICROBIOME[J]. 2018, 6(1): http://ir.qibebt.ac.cn/handle/337004/11043.[37] 马波, 徐健. 人工细胞的表型测试与分选:构建从光谱学到遗传学的桥梁. 中国科学院院刊[J]. 2018, 33(11): 1193-1204, http://lib.cqvip.com/Qikan/Article/Detail?id=676797246.[38] Jing, Xiaoyan, Gou, Honglei, Gong, Yanhai, Su, Xiaolu, Xu, La, Ji, Yuetong, Song, Yizhi, Thompson, Ian P, Xu, Jian, Huang, Wei E. Raman-activated cell sorting and metagenomic sequencing revealing carbon-fixing bacteria in the ocean. ENVIRONMENTAL MICROBIOLOGY[J]. 2018, 20(6): 2241-2255, http://dx.doi.org/10.1111/1462-2920.14268.[39] Xin, Yi, Lu, Yandu, Lee, YiYing, Wei, Li, Jia, Jing, Wang, Qintao, Wang, Dongmei, Bai, Fali, Hu, Hanhua, Hu, Qiang, Liu, Jin, Li, Yantao, Xu, Jian. Producing Designer Oils in Industrial Microalgae by Rational Modulation of Co-evolving Type-2 Diacylglycerol Acyltransferases. MOLECULAR PLANT[J]. 2017, 10(12): 1523-1539, http://dx.doi.org/10.1016/j.molp.2017.10.011.[40] He, Yuehui, Zhang, Peng, Huang, Shi, Wang, Tingting, Ji, Yuetong, Xu, Jian. Label-free, simultaneous quantification of starch, protein and triacylglycerol in single microalgal cells. BIOTECHNOLOGY FOR BIOFUELS[J]. 2017, 10(1): http://www.irgrid.ac.cn/handle/1471x/1755760.[41] 马俊才赵方庆苏晓泉徐健吴林寰. 关于中国微生物组数据中心建设的思考. 中国科学院院刊[J]. 2017, 32(3): 290-296, http://www.chinaxiv.org/abs/201703.00384.[42] Xu, Jian, Ma, Bo, Su, Xiaoquan, Huang, Shi, Xu, Xin, Zhou, Xuedong, Huang, Wei E, Knight, Rob. Emerging Trends for Microbiome Analysis: From Single-Cell Functional Imaging to Microbiome Big Data. ENGINEERING[J]. 2017, 3(1): 66-70, http://lib.cqvip.com/Qikan/Article/Detail?id=671470460.[43] Wang, Xixian, Ren, Lihui, Su, Yetian, Ji, Yuetong, Liu, Yaoping, Li, Chunyu, Li, Xunrong, Zhang, Yi, Wang, Wei, Hu, Qiang, Han, Danxiang, Xu, Jian, Ma, Bo. Raman-Activated Droplet Sorting (RADS) for Label-Free High-Throughput Screening of Microalgal Single-Cells. ANALYTICAL CHEMISTRY[J]. 2017, 89(22): 12569-12577, http://dx.doi.org/10.1021/acs.analchem.7b03884.[44] Zheng, Xin, He, Jinzhi, Wang, Lin, Zhou, Shuangshuang, Peng, Xian, Huang, Shi, Zheng, Liwei, Cheng, Lei, Hao, Yuqing, Li, Jiyao, Xu, Jian, Xu, Xin, Zhou, Xuedong. Ecological Effect of Arginine on Oral Microbiota. SCIENTIFIC REPORTS[J]. 2017, 7(1): https://doaj.org/article/8905cd22e4a94a0f945fab5bbb425bf1.[45] Han, Danxiang, Jia, Jing, Li, Jing, Sommerfeld, Milton, Xu, Jian, Hu, Qiang. Metabolic Remodeling of Membrane Glycerolipids in the Microalga Nannochloropsis oceanica under Nitrogen Deprivation. FRONTIERS IN MARINE SCIENCE[J]. 2017, 4: https://doaj.org/article/9e7a0d47e8fc484d8efbbf0992df6b1a.[46] Wei, Li, Xin, Yi, Wang, Qintao, Yang, Juan, Hu, Hanhua, Xu, Jian. RNAi-based targeted gene knockdown in the model oleaginous microalgae Nannochloropsis oceanica. PLANT JOURNAL[J]. 2017, 89(6): 1236-1250, http://dx.doi.org/10.1111/tpj.13411.[47] Xu, Huifang, Ning, Linlin, Yang, Wenxia, Fang, Bo, Wang, Cong, Wang, Yun, Xu, Jian, Collin, Severine, Laeuffer, Frederic, Fourage, Laurent, Li, Shengying. In vitro oxidative decarboxylation of free fatty acids to terminal alkenes by two new P450 peroxygenases. BIOTECHNOLOGY FOR BIOFUELS[J]. 2017, 10(1): http://dx.doi.org/10.1186/s13068-017-0894-x.[48] 黄适, 滕飞, 杨芳, 朱鹏飞, 苏晓泉, 马波, 徐健. 基于微生物组的口腔“亚健康状态”检测. 生命科学[J]. 2017, 29(7): 660-668, http://sciencechina.cn/gw.jsp?action=detail.jsp&internal_id=6044207&detailType=1.[49] Tao, Yifan, Wang, Yun, Huang, Shi, Zhu, Pengfei, Huang, Wei E, Ling, Junqi, Xu, Jian. Metabolic-Activity-Based Assessment of Antimicrobial Effects by D2O-Labeled Single-Cell Raman Microspectroscopy. ANALYTICAL CHEMISTRY[J]. 2017, 89(7): 4108-4115, http://dx.doi.org/10.1021/acs.analchem.6b05051.[50] Zhang, Qiang, Wang, Tingting, Zhou, Qian, Zhang, Peng, Gong, Yanhai, Gou, Honglei, Xu, Jian, Ma, Bo. Development of a facile droplet-based single-cell isolation platform for cultivation and genomic analysis in microorganisms. SCIENTIFIC REPORTS[J]. 2017, 7: http://www.irgrid.ac.cn/handle/1471x/1755909.[51] Gao, Pengfei, Ma, Chen, Sun, Zheng, Wang, Lifeng, Huang, Shi, Su, Xiaoquan, Xu, Jian, Zhang, Heping. Feed-additive probiotics accelerate yet antibiotics delay intestinal microbiota maturation in broiler chicken. MICROBIOME[J]. 2017, 5(1): http://dx.doi.org/10.1186/s40168-017-0315-1.[52] Wang, Ying, Su, Lijuan, Huang, Shi, Bo, Cunpei, Yang, Sen, Li, Yan, Wang, Fengqin, Xie, Hui, Xu, Jian, Song, Andong. Diversity and resilience of the wood-feeding higher termite Mironasutitermes shangchengensis gut microbiota in response to temporal and diet variations. ECOLOGY AND EVOLUTION[J]. 2016, 6(22): 8235-8242, https://www.webofscience.com/wos/woscc/full-record/WOS:000387664500027.[53] Teng, Fei, He, Tao, Huang, Shi, Bo, CunPei, Li, Zhen, Chang, JinLan, Liu, JiQuan, Charbonneau, Duane, Xu, Jian, Li, Rui, Ling, JunQi. Cetylpyridinium chloride mouth rinses alleviate experimental gingivitis by inhibiting dental plaque maturation. INTERNATIONAL JOURNAL OF ORAL SCIENCE[J]. 2016, 8(3): 182-190, http://lib.cqvip.com/Qikan/Article/Detail?id=670281064.[54] Wang, Qintao, Lu, Yandu, Xin, Yi, Wei, Li, Huang, Shi, Xu, Jian. Genome editing of model oleaginous microalgae Nannochloropsis spp. by CRISPR/Cas9. PLANT JOURNAL[J]. 2016, 88(6): 1071-1081, http://ir.qibebt.ac.cn/handle/337004/9166.[55] Huang, Shi, Li, Zhen, He, Tao, Bo, Cunpei, Chang, Jinlan, Li, Lin, He, Yanyan, Liu, Jiquan, Charbonneau, Duane, Li, Rui, Xu, Jian. Microbiota-based Signature of Gingivitis Treatments: A Randomized Study. SCIENTIFIC REPORTS[J]. 2016, 6: http://dx.doi.org/10.1038/srep24705.[56] Jian Xu. Reverse and mualtiple stable isotope probing to study bacterial metabolism and interactions at the single cell level.. Anal. Chem.. 2016, [57] Teng L. Label-free, rapid and quantitative phenotyping of stress response in E. coli via ramanome.. 2016, http://oa.las.ac.cn/oainone/service/browseall/read1?ptype=JA&workid=JA201804200011397LZ.[58] Teng, Lin, Wang, Xian, Wang, Xiaojun, Gou, Honglei, Ren, Lihui, Wang, Tingting, Wang, Yun, Ji, Yuetong, Huang, Wei E, Xu, Jian. Label-free, rapid and quantitative phenotyping of stress response in E. coli via ramanome. SCIENTIFIC REPORTS[J]. 2016, 6: http://dx.doi.org/10.1038/srep34359.[59] Fei Teng, Tao He, Shi Huang, Cun-Pei Bo, Zhen Li, Jin-Lan Chang, Ji-Quan Liu, Duane Charbonneau, Jian Xu, Rui Li, Jun-Qi Ling. Cetylpyridinium chloride mouth rinses alleviate experimental gingivitis by inhibiting dental plaque maturation. 国际口腔科学杂志:英文版[J]. 2016, 182-190, http://lib.cqvip.com/Qikan/Article/Detail?id=670281064.[60] Guo, Zhuang, Zhang, Jiachao, Wang, Zhanli, Ang, Kay Ying, Huang, Shi, Hou, Qiangchuan, Su, Xiaoquan, Qiao, Jianmin, Zheng, Yi, Wang, Lifeng, Koh, Eileen, Ho Danliang, Xu, Jian, Lee, Yuan Kun, Zhang, Heping. Intestinal Microbiota Distinguish Gout Patients from Healthy Humans. SCIENTIFIC REPORTS[J]. 2016, 6: http://ir.qibebt.ac.cn/handle/337004/7970.[61] Jia, Jing, Han, Danxiang, Gerken, Henri G, Li, Yantao, Sommerfeld, Milton, Hu, Qiang, Xu, Jian. Molecular mechanisms for photosynthetic carbon partitioning into storage neutral lipids in Nannochloropsis oceanica under nitrogen-depletion conditions. ALGAL RESEARCH-BIOMASS BIOFUELS AND BIOPRODUCTS[J]. 2015, 7: 66-77, http://dx.doi.org/10.1016/j.algal.2014.11.005.[62] Jing Jia, Danxiang Han, Henri G. Gerken, Yantao Li, Milton Sommerfeld, Qiang Hu, Jian Xu. Molecular mechanisms for photosynthetic carbon partitioning into storage neutral lipids in Nannochloropsis oceanica under nitrogen-depletion conditions. ALGAL RESEARCH. 2015, 7: 66-77, http://dx.doi.org/10.1016/j.algal.2014.11.005.[63] Tepper, Bruce, Howard, Brian, Schnell, Daniel, Mills, Lisa, Xu, Jian. In vitro method for prediction of plaque reduction by dentifrice. JOURNAL OF MICROBIOLOGICAL METHODS[J]. 2015, 118(1): 85-92, http://dx.doi.org/10.1016/j.mimet.2015.06.017.[64] Ngan, Chew Yee, Wong, CheeHong, Choi, Cindy, Yoshinaga, Yuko, Louie, Katherine, Jia, Jing, Chen, Cindy, Bowen, Benjamin, Cheng, Haoyu, Leonelli, Lauriebeth, Kuo, Rita, Baran, Richard, GarciaCerdan, Jose G, Pratap, Abhishek, Wang, Mei, Lim, Joanne, Tice, Hope, Daum, Chris, Xu, Jian, Northen, Trent, Visel, Axel, Bristow, James, Niyogi, Krishna K, Wei, ChiaLin. Lineage-specific chromatin signatures reveal a regulator of lipid metabolism in microalgae. NATURE PLANTS[J]. 2015, 1(8): http://ir.qibebt.ac.cn/handle/337004/6779.[65] 路延笃, 徐健, 辛一. 微拟球藻I型脂酰辅酶A: 二脂酰甘油酰基转移酶编码基因NoDGAT1A的功能分析. 海洋科学[J]. 2015, 39(10): 15-20, http://sciencechina.cn/gw.jsp?action=detail.jsp&internal_id=5576791&detailType=1.[66] Zhang, Qiang, Zhang, Peiran, Gou, Honglei, Mou, Chunbo, Huang, Wei E, Yang, Menglong, Xu, Jian, Ma, Bo. Towards high-throughput microfluidic Raman-activated cell sorting (vol 140, pg 6163, 2015). ANALYST. 2015, 140(19): 6758-6758, http://ir.qibebt.ac.cn/handle/337004/6597.[67] Li, Chunyu, Xu, Jian, Ma, Bo. Precise quantitative addition of multiple reagents into droplets in sequence using glass fiber-induced droplet coalescence. ANALYST[J]. 2015, 140(3): 701-705, http://ir.qibebt.ac.cn/handle/337004/6079.[68] Zhang, Qiang, Zhang, Peiran, Gou, Honglei, Mou, Chunbo, Huang, Wei E, Yang, Menglong, Xu, Jian, Ma, Bo. Towards high-throughput microfluidic Raman-activated cell sorting. ANALYST[J]. 2015, 140(18): 6163-6174, http://www.irgrid.ac.cn/handle/1471x/1000833.[69] Huang, Wei E, Song, Yizhi, Xu, Jian. Single cell biotechnology to shed a light on biological 'dark matter' in nature. MICROBIAL BIOTECHNOLOGY[J]. 2015, 8(1): 15-16, http://dx.doi.org/10.1111/1751-7915.12249.[70] Teng, Lin, Wang, Kun, Xu, Jian, Xu, Chenggang. Flavin mononucleotide (FMN)-based fluorescent protein (FbFP) as reporter for promoter screening in Clostridium cellulolyticum. JOURNAL OF MICROBIOLOGICAL METHODS[J]. 2015, 119(1): 37-43, http://dx.doi.org/10.1016/j.mimet.2015.09.018.[71] Su Xiaoquan, Wang Xiaojun, Jing Gongchao, Huang Shi, Xu Jian, Ning Kang. Application of Meta-Mesh on the analysis of microbial communities from human associated-habitats. QUANTITATIVE BIOLOGY[J]. 2015, 3(1): 4-18, http://dx.doi.org/10.1007/s40484-015-0040-3.[72] Zhang, Dayi, Berry, James P, Zhu, Di, Wang, Yun, Chen, Yin, Jiang, Bo, Huang, Shi, Langford, Harry, Li, Guanghe, Davison, Paul A, Xu, Jian, Aries, Eric, Huang, Wei E. Magnetic nanoparticle-mediated isolation of functional bacteria in a complex microbial community. ISME JOURNAL[J]. 2015, 9(3): 603-614, http://dx.doi.org/10.1038/ismej.2014.161.[73] Lu, Yandu, Xu, Jian. Phytohormones in microalgae: a new opportunity for microalgal biotechnology?. TRENDS IN PLANT SCIENCE[J]. 2015, 20(5): 273-282, http://dx.doi.org/10.1016/j.tplants.2015.01.006.[74] Zhang, Peiran, Ren, Lihui, Zhang, Xu, Shan, Yufei, Wang, Yun, Ji, Yuetong, Yin, Huabing, Huang, Wei E, Xu, Jian, Ma, Bo. Raman-Activated Cell Sorting Based on Dielectrophoretic Single-Cell Trap and Release. ANALYTICAL CHEMISTRY[J]. 2015, 87(4): 2282-2289, http://ir.qibebt.ac.cn/handle/337004/6084.[75] Li, Chunyu, Xu, Jian, Ma, Bo. A self-powered microfluidic monodispersed droplet generator with capability of multi-sample introduction. MICROFLUIDICS AND NANOFLUIDICS[J]. 2015, 18(5-6): 1067-1073, https://www.webofscience.com/wos/woscc/full-record/WOS:000353819900029.[76] Teng, Fei, Yang, Fang, Huang, Shi, Bo, Cunpei, Xu, Zhenjiang Zech, Amir, Amnon, Knight, Rob, Ling, Junqi, Xu, Jian. Prediction of Early Childhood Caries via Spatial-Temporal Variations of Oral Microbiota. CELL HOST & MICROBE[J]. 2015, 18(3): 296-306, http://dx.doi.org/10.1016/j.chom.2015.08.005.[77] Xu, Chenggang, Huang, Ranran, Teng, Lin, Jing, Xiaoyan, Hu, Jianqiang, Cui, Guzhen, Wang, Yilin, Cui, Qiu, Xu, Jian. Cellulosome stoichiometry in Clostridium cellulolyticum is regulated by selective RNA processing and stabilization. NATURE COMMUNICATIONS[J]. 2015, 6: http://dx.doi.org/10.1038/ncomms7900.[78] Yang, Fang, Ning, Kang, Chang, Xingzhi, Yuan, Xiao, Tu, Qichao, Yuan, Tong, Deng, Ye, Hemme, Christopher L, Van Nostrand, Joy, Cui, Xinping, He, Zhili, Chen, Zhenggang, Guo, Dawei, Yu, Jiangbo, Zhang, Yue, Zhou, Jizhong, Xu, Jian. Saliva Microbiota Carry Caries-Specific Functional Gene Signatures. PLOS ONE[J]. 2014, 9(2): http://dx.doi.org/10.1371/journal.pone.0076458.[79] Lu, Yandu, Zhou, Wenxu, Wei, Li, Li, Jing, Jia, Jing, Li, Fei, Smith, Steven M, Xu, Jian. Regulation of the cholesterol biosynthetic pathway and its integration with fatty acid biosynthesis in the oleaginous microalga Nannochloropsis oceanica. BIOTECHNOLOGY FOR BIOFUELS[J]. 2014, 7(1): 81-81, http://dx.doi.org/10.1186/1754-6834-7-81.[80] Ji, Yuetong, He, Yuehui, Cui, Yanbin, Wang, Tingting, Wang, Yun, Li, Yuanguang, Huang, Wei E, Xu, Jian. Raman spectroscopy provides a rapid, non-invasive method for quantitation of starch in live, unicellular microalgae. BIOTECHNOLOGY JOURNAL[J]. 2014, 9(12): 1512-1518, http://dx.doi.org/10.1002/biot.201400165.[81] Lu, Yandu, Tarkowska, Danuse, Tureckova, Veronika, Luo, Tingwei, Xin, Yi, Li, Jing, Wang, Qintao, Jiao, Nianzhi, Strnad, Miroslav, Xu, Jian. Antagonistic roles of abscisic acid and cytokinin during response to nitrogen depletion in oleaginous microalga Nannochloropsis oceanica expand the evolutionary breadth of phytohormone function. PLANT JOURNAL[J]. 2014, 80(1): 52-68, http://dx.doi.org/10.1111/tpj.12615.[82] Su, Xiaoquan, Pan, Weihua, Song, Baoxing, Xu, Jian, Ning, Kang. Parallel-META 2.0: Enhanced Metagenomic Data Analysis with Functional Annotation, High Performance Computing and Advanced Visualization. PLOS ONE[J]. 2014, 9(3): http://dx.doi.org/10.1371/journal.pone.0089323.[83] Wang, Tingting, Ji, Yuetong, Wang, Yun, Jia, Jing, Li, Jing, Huang, Shi, Han, Danxiang, Hu, Qiang, Huang, Wei E, Xu, Jian. Quantitative dynamics of triacylglycerol accumulation in microalgae populations at single-cell resolution revealed by Raman microspectroscopy. BIOTECHNOLOGY FOR BIOFUELS[J]. 2014, 7(1): http://dx.doi.org/10.1186/1754-6834-7-58.[84] Hu, Jianqiang, Wang, Dongmei, Li, Jing, Jing, Gongchao, Ning, Kang, Xu, Jian. Genome-wide identification of transcription factors and transcription-factor binding sites in oleaginous microalgae Nannochloropsis. SCIENTIFIC REPORTS[J]. 2014, 4: http://dx.doi.org/10.1038/srep05454.[85] Wang, Dongmei, Ning, Kang, Li, Jing, Hu, Jianqiang, Han, Danxiang, Wang, Hui, Zeng, Xiaowei, Jing, Xiaoyan, Zhou, Qian, Su, Xiaoquan, Chang, Xingzhi, Wang, Anhui, Wang, Wei, Jia, Jing, Wei, Li, Xin, Yi, Qiao, Yinghe, Huang, Ranran, Chen, Jie, Han, Bo, Yoon, Kangsup, Hill, Russell T, Zohar, Yonathan, Chen, Feng, Hu, Qiang, Xu, Jian. Nannochloropsis Genomes Reveal Evolution of Microalgal Oleaginous Traits. PLOS GENETICS[J]. 2014, 10(1): http://dx.doi.org/10.1371/journal.pgen.1004094.[86] Jian Xu. Oral Microbial Structure Predicts Gingivitis Susceptibility and Severity.. ISME J. 2014, [87] Xinwei Cheng, Xiaohua Chen, Xiaoquan Su, Huanxin Zhao, Maozhen Han, Cunpei Bo, Jian Xu, Hong Bai, Kang Ning. DNA Extraction Protocol for Biological Ingredient Analysis of Liuwei Dihuang Wan. GENOMICS, PROTEOMICS & BIOINFORMATICS[J]. 2014, 12(3): 137-143, http://dx.doi.org/10.1016/j.gpb.2014.03.002.[88] Li, Jing, Han, Danxiang, Wang, Dongmei, Ning, Kang, Jia, Jing, Wei, Li, Jing, Xiaoyan, Huang, Shi, Chen, Jie, Li, Yantao, Hu, Qiang, Xu, Jian. Choreography of Transcriptomes and Lipidomes of Nannochloropsis Reveals the Mechanisms of Oil Synthesis in Microalgae. PLANT CELL[J]. 2014, 26(4): 1645-1665, http://dx.doi.org/10.1105/tpc.113.121418.[89] Zhang, Qiang, Zhang, Peiran, Su, Yetian, Mou, Chunbo, Zhou, Teng, Yang, Menglong, Xu, Jian, Ma, Bo. On-demand control of microfluidic flow via capillary-tuned solenoid microvalve suction. LAB ON A CHIP[J]. 2014, 14(24): 4599-4603, http://ir.qibebt.ac.cn/handle/337004/6280.[90] 苏晓泉, 宋宝兴, 王雪涛, 马新乐, 徐健, 宁康. Meta-Mesh——元基因组数据分析系统. 生物工程学报[J]. 2014, 30(1): 6-, http://ir.qibebt.ac.cn/handle/337004/8778.[91] Zhou, Qian, Liu, Z Lewis, Ning, Kang, Wang, Anhui, Zeng, Xiaowei, Xu, Jian. Genomic and transcriptome analyses reveal that MAPK- and phosphatidylinositol-signaling pathways mediate tolerance to 5-hydroxymethyl-2-furaldehyde for industrial yeast Saccharomyces cerevisiae. SCIENTIFIC REPORTS[J]. 2014, 4: http://dx.doi.org/10.1038/srep06556.[92] Dongmei WangKang NingJing LiJianqiang HuDanxiang HanHui WangXiaowei ZengXiaoyan JingQian ZhouXiaoquan SuXingzhi ChangAnhui WangWei WangJing JiaLi WeiYi XinYinghe QiaoRanran HuangJie ChenBo HanKangsup YoonRussell T HillYonathan ZoharFeng ChenQiang HuJian Xu. Nannochloropsis genomes reveal evolution of microalgal oleaginous traits.. PLOS GENET[J]. 2014, 10(1): 1-, http://gooa.las.ac.cn/external/index?type=-1&pid=884015.[93] Lin, Lu, Ji, Yuetong, Tu, Qichao, Huang, Ranran, Teng, Lin, Zeng, Xiaowei, Song, Houhui, Wang, Kun, Zhou, Qian, Li, Yifei, Cui, Qiu, He, Zhili, Zhou, Jizhong, Xu, Jian. Microevolution from shock to adaptation revealed strategies improving ethanol tolerance and production in Thermoanaerobacter. BIOTECHNOLOGY FOR BIOFUELS[J]. 2013, 6(1): 103-103, http://dx.doi.org/10.1186/1754-6834-6-103.[94] Wang, Y., Ji, Y., Wharfe, E. S., Meadows, R. S., March, P., Goodacre, R., . . . Huang, W. E. (2013). Raman activated cell ejection for isolation of single cells. Analytical Chemistry, 85(22), 10697-10701. doi: 10.1021/ac403107p. ANAL CHEM[J]. 2013, http://ir.qibebt.ac.cn/handle/337004/8834.[95] 王琨, 滕琳, 许成钢, 杨晓红, 徐健. 超声波介导的微生物细胞转化. 微生物学通报[J]. 2013, 40(9): 1696-1702, http://ir.qibebt.ac.cn/handle/337004/8901.[96] Wei, L., Xin, Y., Wang, D., Jing, X., Zhou, Q., Su, X., . . . Hu, Q. (2013). Nannochloropsis plastid and mitochondrial phylogenomes reveal organelle diversification mechanism and intragenus phylotyping strategy in microalgae. BMC Genomics, 14, 534.. BMC GENET[J]. 2013, http://ir.qibebt.ac.cn/handle/337004/8836.[97] Wang, Yun, Ji, Yuetong, Wharfe, Emma S, Meadows, Roger S, March, Peter, Goodacre, Royston, Xu, Jian, Huang, Wei E. Raman Activated Cell Ejection for Isolation of Single Cells. ANALYTICAL CHEMISTRY[J]. 2013, 85(22): 10697-10701, http://dx.doi.org/10.1021/ac403107p.[98] Xu, Chenggang, Huang, Ranran, Teng, Lin, Wang, Dongmei, Hemme, Christopher L, Borovok, Ilya, He, Qiang, Lamed, Raphael, Bayer, Edward A, Zhou, Jizhong, Xu, Jian. Structure and regulation of the cellulose degradome in Clostridium cellulolyticum. BIOTECHNOLOGY FOR BIOFUELS[J]. 2013, 6: 73-73, http://dx.doi.org/10.1186/1754-6834-6-73.[99] Lin, L., Xu, J.. . Dissecting and engineering metabolic and regulatory networks of thermophilic bacteria for biofuel production. BIOTECHNOLOGY ADVANCE[J]. 2013, 31(6): 827-837, http://ir.qibebt.ac.cn:8080/handle/337004/1614.[100] Jian Xu, Jizhong Zhou, Zhili He, Qiu Cui, Yifei Li, Qian Zhou, Kun Wang, Houhui Song, Xiaowei Zeng, Lin Teng, Ranran Huang, Qichao Tu, Yuetong Ji, Lu Lin. Microevolution from shock to adaptation revealed strategies improving ethanol tolerance and production in Thermoanaerobacter. 2013, http://oa.las.ac.cn/oainone/service/browseall/read1?ptype=JA&workid=JA201706289918876ZK.[101] Lee, YongJin, van Nostrand, Joy D, Tu, Qichao, Lu, Zhenmei, Cheng, Lei, Yuan, Tong, Deng, Ye, Carter, Michelle Q, He, Zhili, Wu, Liyou, Yang, Fang, Xu, Jian, Zhou, Jizhong. The PathoChip, a functional gene array for assessing pathogenic properties of diverse microbial communities. ISME JOURNAL[J]. 2013, 7(10): 1974-1984, http://dx.doi.org/10.1038/ismej.2013.88.[102] Lin, Lu, Xu, Jian. Dissecting and engineering metabolic and regulatory networks of thermophilic bacteria for biofuel production. BIOTECHNOLOGY ADVANCES[J]. 2013, 31(6): 827-837, http://dx.doi.org/10.1016/j.biotechadv.2013.03.003.[103] Zhou, Qian, Su, Xiaoquan, Wang, Anhui, Xu, Jian, Ning, Kang. QC-Chain: Fast and Holistic Quality Control Method for Next-Generation Sequencing Data. PLOS ONE[J]. 2013, 8(4): http://www.irgrid.ac.cn/handle/1471x/830076.[104] Wei, Li, Xin, Yi, Wang, Dongmei, Jing, Xiaoyan, Zhou, Qian, Su, Xiaoquan, Jia, Jing, Ning, Kang, Chen, Feng, Hu, Qiang, Xu, Jian. Nannochloropsis plastid and mitochondrial phylogenomes reveal organelle diversification mechanism and intragenus phylotyping strategy in microalgae. BMC GENOMICS[J]. 2013, 14(14): 534-534, http://dx.doi.org/10.1186/1471-2164-14-534.[105] Wang, Yun, Chen, Yin, Zhou, Qian, Huang, Shi, Ning, Kang, Xu, Jian, Kalin, Robert M, Rolfe, Stephen, Huang, Wei E. A Culture-Independent Approach to Unravel Uncultured Bacteria and Functional Genes in a Complex Microbial Community. PLOS ONE[J]. 2012, 7(10): http://www.irgrid.ac.cn/handle/1471x/520936.[106] WANG Bao-Zhan, ZHANG Cai-Xia, LIU Ji-Liang, ZENG Xiao-Wei, LI Feng-Rui, WU Yu-Cheng, LIN Xian-Gui, XIONG Zheng-Qin, XU Jian, JIA Zhong-Jun. Microbial Community Changes Along a Land-Use Gradient of Desert Soil Origin. 土壤圈:英文版[J]. 2012, 22(5): 593-603, http://lib.cqvip.com/Qikan/Article/Detail?id=43099074.[107] Su, Xiaoquan, Xu, Jian, Ning, Kang. Parallel-META: efficient metagenomic data analysis based on high-performance computation. BMC SYSTEMS BIOLOGY[J]. 2012, 6(1): S16-S16, http://www.irgrid.ac.cn/handle/1471x/520935.[108] Jian, XiaoHong, Pan, HaiXue, Nin, TingTing, Shi, YuanYuan, Chen, YongSheng, Li, Yan, Zeng, XiaoWei, Xu, Jian, Tang, GongLi. Analysis of YM-216391 Biosynthetic Gene Cluster and Improvement of the Cyclopeptide Production in a Heterologous Host. ACS CHEMICAL BIOLOGY[J]. 2012, 7(4): 646-651, http://www.irgrid.ac.cn/handle/1471x/681928.[109] Wang, Dongmei, Lu, Yandu, Huang, He, Xu, Jian, Bai, FW, Liu, CG, Huang, H, Tsao, GT. Establishing Oleaginous Microalgae Research Models for Consolidated Bioprocessing of Solar Energy. BIOTECHNOLOGY IN CHINA III: BIOFUELS AND BIOENERGY[J]. 2012, 128: 69-84, https://www.webofscience.com/wos/woscc/full-record/WOS:000321104200005.[110] Yang, F., Zeng, X. W., Ning, K., Liu, K. L., Lo, C. C., Wang, W.,JianXu.. Yang, F., Zeng, X. W., Ning, K., Liu, K. L., Lo, C. C., Wang, W.,JianXu. (2012). Saliva microbiomes distinguish caries-active from healthy human populations. Isme Journal, 6(1), 1-10. doi: DOI 10.1038/ismej.2011.71. ISME J[J]. 2012, 6(1): 1-, http://ir.qibebt.ac.cn/handle/337004/8922.[111] Xu, Meiying, Chen, Xingjuan, Qiu, Mengde, Zeng, Xiaowei, Xu, Jian, Deng, Daiyong, Sun, Guoping, Li, Xiang, Guo, Jun. Bar-Coded Pyrosequencing Reveals the Responses of PBDE-Degrading Microbial Communities to Electron Donor Amendments. PLOS ONE[J]. 2012, 7(1): http://www.irgrid.ac.cn/handle/1471x/520939.[112] Li, Jianjun, Ye, Guangyun, Sun, Duanfang, Sun, Guoping, Zeng, Xiaowei, Xu, Jian, Liang, Shizhong. Performances of two biotrickling filters in treating H2S-containing waste gases and analysis of corresponding bacterial communities by pyrosequencing. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY[J]. 2012, 95(6): 1633-1641, http://ir.qibebt.ac.cn/handle/337004/6333.[113] You, Na, Murillo, Gabriel, Su, Xiaoquan, Zeng, Xiaowei, Xu, Jian, Ning, Kang, Zhang, Shoudong, Zhu, Jiankang, Cui, Xinping. SNP calling using genotype model selection on high-throughput sequencing data. BIOINFORMATICS[J]. 2012, 28(5): 643-650, http://www.irgrid.ac.cn/handle/1471x/520937.[114] Song, Baoxing, Su, Xiaoquan, Xu, Jian, Ning, Kang. MetaSee: An Interactive and Extendable Visualization Toolbox for Metagenomic Sample Analysis and Comparison. PLOS ONE[J]. 2012, 7(11): http://www.irgrid.ac.cn/handle/1471x/520934.[115] Li, Mengqiu, Xu, Jian, RomeroGonzalez, Maria, Banwart, Steve A, Huang, Wei E. Single cell Raman spectroscopy for cell sorting and imaging. CURRENT OPINION IN BIOTECHNOLOGYnull. 2012, 23(1): 56-63, http://dx.doi.org/10.1016/j.copbio.2011.11.019.[116] Wang BaoZhan, Zhang CaiXia, Liu JiLiang, Zeng XiaoWei, Li FengRui, Wu YuCheng, Lin XianGui, Xiong ZhengQin, Xu Jian, Jia ZhongJun. Microbial Community Changes Along a Land-Use Gradient of Desert Soil Origin. PEDOSPHERE[J]. 2012, 22(5): 593-603, http://lib.cqvip.com/Qikan/Article/Detail?id=43099074.[117] Huang, Shi, Yang, Fang, Zeng, Xiaowei, Chen, Jie, Li, Rui, Wen, Ting, Li, Chun, Wei, Wei, Liu, Jiquan, Chen, Lan, Davis, Catherine, Xu, Jian. Preliminary characterization of the oral microbiota of Chinese adults with and without gingivitis. BMC ORAL HEALTH[J]. 2011, 11(1): 33-33, http://www.irgrid.ac.cn/handle/1471x/427265.[118] 黄适, 吴双秀, 徐健. 微拟球藻培养中共生关系的初步研究. 安徽农业科学[J]. 2011, 39(23): 14246-14249, http://lib.cqvip.com/Qikan/Article/Detail?id=40756953.[119] 苏晓泉, 徐健, 宁康. 服务于微生物群落研究的高性能元基组数据分析平台. 科研信息化技术与应用:中英文[J]. 2011, 2(6): 68-82, http://lib.cqvip.com/Qikan/Article/Detail?id=41017363.[120] Xia, Weiwei, Zhang, Caixia, Zeng, Xiaowei, Feng, Youzhi, Weng, Jiahua, Lin, Xiangui, Zhu, Jianguo, Xiong, Zhengqin, Xu, Jian, Cai, Zucong, Jia, Zhongjun. Autotrophic growth of nitrifying community in an agricultural soil. ISME JOURNAL[J]. 2011, 5(7): 1226-1236, http://ir.qibebt.ac.cn/handle/337004/6544.[121] Lin, Lu, Song, Houhui, Tu, Qichao, Qin, Yujia, Zhou, Aifen, Liu, Wenbin, He, Zhili, Zhou, Jizhong, Xu, Jian. The Thermoanaerobacter Glycobiome Reveals Mechanisms of Pentose and Hexose Co-Utilization in Bacteria. PLOS GENETICS[J]. 2011, 7(10): http://dx.doi.org/10.1371/journal.pgen.1002318.[122] Xu, Chenggang, Qin, Yong, Li, Yudong, Ji, Yuetong, Huang, Jianzhong, Song, Houhui, Xu, Jian. Factors influencing cellulosome activity in Consolidated Bioprocessing of cellulosic ethanol. BIORESOURCE TECHNOLOGY[J]. 2010, 101(24): 9560-9569, http://dx.doi.org/10.1016/j.biortech.2010.07.065.[123] Lin, Lu, Song, Houhui, Ji, Yuetong, He, Zhili, Pu, Yunting, Zhou, Jizhong, Xu, Jian. Ultrasound-Mediated DNA Transformation in Thermophilic Gram-Positive Anaerobes. PLOS ONE[J]. 2010, 5(9): http://dx.doi.org/10.1371/journal.pone.0012582.[124] Feng, Xueyang, Mouttaki, Housna, Lin, Lu, Huang, Rick, Wu, Bing, Hemme, Christopher L, He, Zhili, Zhang, Baichen, Hicks, Leslie M, Xu, Jian, Zhou, Jizhong, Tang, Yinjie J. Characterization of the Central Metabolic Pathways in Thermoanaerobacter sp Strain X514 via Isotopomer-Assisted Metabolite Analysis. APPLIED AND ENVIRONMENTAL MICROBIOLOGY[J]. 2009, 75(15): 5001-5008, http://www.irgrid.ac.cn/handle/1471x/265021.[125] Jian Xu, Michael A Mahowald, Ruth E Ley, Catherine A Lozupone, Micah Hamady, Eric C Martens, Bernard Henrissat, Pedro M Coutinho, Patrick Minx, Philippe Latreille, Holland Cordum, Andrew Van Brunt, Kyung Kim, Robert S Fulton, Lucinda A Fulton, Sandra W Clifton, Richard K Wilson, Robin D Knight, Jeffrey I Gordon. Evolution of symbiotic bacteria in the distal human intestine.. PLOS BIOLOGY[J]. 2007, 5(7): 1574-1586, IR_Article.[126] Xu, J, Bjursell, MK, Himrod, J, Deng, S, Carmichael, LK, Chiang, HC, Hooper, LV, Gordon, JI. A genomic view of the human-Bacteroides thetaiotaomicron symbiosis. SCIENCE[J]. 2003, 299(5615): 2074-2076, http://www.irgrid.ac.cn/handle/1471x/515865.[127] Jian Xu. Inaugural Article: Honor Thy Symbionts. Proc Natl Acad Sci USA. 2003,