基本信息
贾仲君  男  博导  中国科学院南京土壤研究所
电子邮件: jia@issas.ac.cn
通信地址: 江苏省南京市玄武区北京东路71号
邮政编码: 210008

研究领域

Soil Microbiology
Environmental Microbiology
Microbial Ecology

招生信息

   
招生专业
083001-环境科学
090301-土壤学
招生方向
环境微生物基因组学和转录组学
环境生物技术与土壤微生物基因资源

教育背景

1997-09--2002-07   中国科学院南京土壤研究所   博士
1993-09--1997-07   山西大学   大学
学历
-- 研究生
学位
-- 博士

工作经历

   
工作简历
2022-01~现在, 中国科学院东北地理与农业生态研究所, 研究员
2008-12~2022-01,中国科学院南京土壤研究所, 研究员
2006-05~2008-11,Max-Planck-Institut für terrestrische Mikrobiologi, 马普学会客座研究员
2003-11~2006-05,Nagoya University, 日本学术振兴会特别研究员
2003-07~2003-10,North Carolina State University, 访问学者
2002-09~2003-07,USDA/ARS & Colorado School of Mines, 访问学者

教授课程

现代分子生物学研究方法与应用

专利与奖励

   
奖励信息
(1) 2012度中国科学院****终期评估优秀奖, , 院级, 2012
(2) 2012年度江苏省首届杰出青年科学基金, , 省级, 2012
(3) 2011年度江苏省“333高层次人才培养工程”培养对象, , 省级, 2011
(4) 2005年度德国马克斯-普朗克学会访问学者奖, , 专项, 2005
(5) 2004年度江苏省科学技术进步奖一等奖, 一等奖, 省级, 2004
(6) 2003年度日本科学技术振兴会JSPS外国人特别研究员奖, , 专项, 2003
(7) 2002年中国科学院院长优秀奖, , 部委级, 2002
(8) 2001年度国际全球变化分析研究培训系统总部(START)青年科学家奖, , 专项, 2001
专利成果
[1] 冯有智, 林先贵, 贾仲君. 利用DNA稳定性同位素探针原位揭示判别稻田甲酸利用型产甲烷古菌的方法. 中国: CN103966318A, 2014-08-06.

出版信息

   
发表论文
[1] Wang, Yufang, Cai, Yuanfeng, Hou, Fujiang, Jia, Zhongjun, Bowatte, Saman. Sheep grazing impacts on soil methanotrophs and their activity in typical steppe in the Loess Plateau China. APPLIED SOIL ECOLOGY[J]. 2022, 175: http://dx.doi.org/10.1016/j.apsoil.2022.104440.
[2] Zhang, Yaohong, Wang, Fangyuan, Jia, Zhongjun. Electron shuttles facilitate anaerobic methane oxidation coupled to nitrous oxide reduction in paddy soil. SOIL BIOLOGY & BIOCHEMISTRY[J]. 2021, 153: http://dx.doi.org/10.1016/j.soilbio.2020.108091.
[3] Zhao, Yuxiang, Hu, Jiajie, Yang, Weiling, Wang, Jiaqi, Jia, Zhongjun, Zheng, Ping, Hu, Baolan. The long-term effects of using nitrite and urea on the enrichment of comammox bacteria. SCIENCE OF THE TOTAL ENVIRONMENT[J]. 2021, 755: http://dx.doi.org/10.1016/j.scitotenv.2020.142580.
[4] Xu, Jisheng, Gao, Wei, Zhao, Bingzi, Chen, Meiqi, Ma, Lei, Jia, Zhongjun, Zhang, Jiabao. Bacterial community composition and assembly along a natural sodicity/salinity gradient in surface and subsurface soils. APPLIED SOIL ECOLOGY[J]. 2021, 157: http://dx.doi.org/10.1016/j.apsoil.2020.103731.
[5] Wang, Xinxin, Zhang, Wei, Liu, Yan, Jia, Zhongjun, Li, Hui, Yang, Yunfeng, Wang, Dongmei, He, Hongbo, Zhang, Xudong. Identification of microbial strategies for labile substrate utilization at phylogenetic classification using a microcosm approach. SOIL BIOLOGY & BIOCHEMISTRY[J]. 2021, 153: http://dx.doi.org/10.1016/j.soilbio.2020.107970.
[6] Kaupper, Thomas, Mendes, Lucas W, Lee, Hyo Jung, Mo, Yongliang, Poehlein, Anja, Jia, Zhongjun, Horn, Marcus A, Ho, Adrian. When the going gets tough: Emergence of a complex methane-driven interaction network during recovery from desiccation-rewetting. SOIL BIOLOGY & BIOCHEMISTRY[J]. 2021, 153: http://dx.doi.org/10.1016/j.soilbio.2020.108109.
[7] Sun, Xiangxin, Zhao, Jun, Zhou, Xue, Bei, Qicheng, Xia, Weiwei, Zhao, Bingzi, Zhang, Jiabao, Jia, Zhongjun. Salt tolerance-based niche differentiation of soil ammonia oxidizers. ISME JOURNAL. 2021, [8] Yun, Juanli, Crombie, Andrew T, Ul Haque, Muhammad Farhan, Cai, Yuanfeng, Zheng, Xiaowei, Wang, Jian, Jia, Zhongjun, Murrell, J Colin, Wang, Yanfen, Du, Wenbin. Revealing the community and metabolic potential of active methanotrophs by targeted metagenomics in the Zoige wetland of the Tibetan Plateau. ENVIRONMENTAL MICROBIOLOGY[J]. 2021, 23(11): 6520-6535, http://apps.webofknowledge.com/CitedFullRecord.do?product=UA&colName=WOS&SID=5CCFccWmJJRAuMzNPjj&search_mode=CitedFullRecord&isickref=WOS:000686297500001.
[9] SilvaBrito, Francisca, Alexandrino, Diogo A M, Jia, Zhongjun, Mo, Yongliang, Kijjoa, Anake, Abreu, Helena, Carvalho, Maria F, Oz, Rodrigo, Magnoni, Leonardo. Fish performance, intestinal bacterial community, digestive function and skin and fillet attributes during cold storage of gilthead seabream (Sparus aurata) fed diets supplemented with Gracilaria by-products. AQUACULTURE[J]. 2021, 541: http://dx.doi.org/10.1016/j.aquaculture.2021.736808.
[10] Zhao, Jun, Chen, Dongfeng, Gao, Wei, Guo, Zhiying, Jia, Zhongjun, Hernandez, Marcela. Resuscitation of soil microbiota after > 70-years of desiccation. EUROPEAN JOURNAL OF SOIL BIOLOGY[J]. 2021, 103: http://dx.doi.org/10.1016/j.ejsobi.2021.103290.
[11] Liu, Haiyang, Hu, Hangwei, Huang, Xing, Ge, Tida, Li, Yongfu, Zhu, Zhenke, Liu, Xingmei, Tan, Wenfeng, Jia, Zhongjun, Di, Hongjie, Xu, Jianming, Li, Yong. Canonical ammonia oxidizers, rather than comammox Nitrospira, dominated autotrophic nitrification during the mineralization of organic substances in two paddy soils. SOIL BIOLOGY & BIOCHEMISTRY[J]. 2021, 156: http://dx.doi.org/10.1016/j.soilbio.2021.108192.
[12] Liu, Jumei, Han, Jingjing, Zhu, Chunwu, Cao, Weiwei, Luo, Ying, Zhang, Meng, Zhang, Shaohua, Jia, Zhongjun, Yu, Ruihong, Zhao, Ji, Bao, Zhihua. Elevated Atmospheric CO2 and Nitrogen Fertilization Affect the Abundance and Community Structure of Rice Root-Associated Nitrogen-Fixing Bacteria. FRONTIERS IN MICROBIOLOGY[J]. 2021, 12: https://doaj.org/article/e508a97a7d2544f19dc12a4d2009cfd8.
[13] Jing, Xiaoyan, Gong, Yanhai, Xu, Teng, Meng, Yu, Han, Xiao, Su, Xiaolu, Wang, Jianmei, Ji, Yuetong, Li, Yuandong, Jia, Zhongjun, Ma, Bo, Xu, Jian. One-Cell Metabolic Phenotyping and Sequencing of Soil Microbiome by Raman-Activated Gravity-Driven Encapsulation (RAGE). MSYSTEMS[J]. 2021, 6(3): http://dx.doi.org/10.1128/mSystems.00181-21.
[14] 杨丽洁, 贾仲君. “99%难培养”微生物的概念与初步评价:以固氮菌为例. 微生物学报. 2021, 903-922, https://kns.cnki.net/KCMS/detail/detail.aspx?dbcode=CJFQ&dbname=CJFDLAST2021&filename=WSXB202104011&v=MDU4MDZ1ZlllZG1GQ3JoVkwvSk1qN1RiTEc0SE5ETXE0OUVaWVI4ZVgxTHV4WVM3RGgxVDNxVHJXTTFGckNVUjc=.
[15] Liu, Ying, Fang, Jiasong, Jia, Zhongjun, Chen, Songze, Zhang, Li, Gao, Wei. DNA stable-isotope probing reveals potential key players for microbial decomposition and degradation of diatom-derived marine particulate matter. MICROBIOLOGYOPEN[J]. 2020, 9(5): https://doaj.org/article/bf7f92d4ca4e4bba863b4d65f679dede.
[16] Xia, WeiWei, Zhao, Jun, Zheng, Yan, Zhang, HuiMin, Zhang, JiaBao, Chen, RuiRui, Lin, XianGui, Jia, ZhongJun. Active Soil Nitrifying Communities Revealed by In Situ Transcriptomics and Microcosm-Based Stable-Isotope Probing. APPLIED AND ENVIRONMENTAL MICROBIOLOGY[J]. 2020, 86(23): https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7657639/.
[17] Cai, Yuanfeng, Zhou, Xue, Shi, Limei, Jia, Zhongjun. Atmospheric Methane Oxidizers Are Dominated by Upland Soil Cluster Alpha in 20 Forest Soils of China. MICROBIAL ECOLOGY[J]. 2020, 80(4): 859-871, http://dx.doi.org/10.1007/s00248-020-01570-1.
[18] Gao, Wei, Xu, Jisheng, Zhao, Jun, Zhang, Huimin, Ni, Yingying, Zhao, Bingzi, Tebbe, Christoph C, Zhang, Jiabao, Jia, Zhongjun. Prokaryotic community assembly after 40 years of soda solonetz restoration by natural grassland and reclaimed farmland. EUROPEAN JOURNAL OF SOIL BIOLOGY[J]. 2020, 100: http://dx.doi.org/10.1016/j.ejsobi.2020.103213.
[19] Faheem, Muhammad, Shabbir, Sadaf, Zhao, Jun, Kerr, Philip G, Sultana, Nasrin, Jia, Zhongjun. Enhanced Adsorptive Bioremediation of Heavy Metals (Cd2+, Cr6+, Pb2+) by Methane-Oxidizing Epipelon. MICROORGANISMS[J]. 2020, 8(4): http://apps.webofknowledge.com/CitedFullRecord.do?product=UA&colName=WOS&SID=5CCFccWmJJRAuMzNPjj&search_mode=CitedFullRecord&isickref=WOS:000533510400148.
[20] Ho, Adrian, Mendes, Lucas W, Lee, Hyo Jung, Kaupper, Thomas, Mo, Yongliang, Poehlein, Anja, Bodelier, Paul L E, Jia, Zhongjun, Horn, Marcus A. Response of a methane-driven interaction network to stressor intensification. FEMS MICROBIOLOGY ECOLOGY[J]. 2020, 96(10): https://www.webofscience.com/wos/woscc/full-record/WOS:000581018800013.
[21] Mo, Yongliang, Jin, Feng, Zheng, Yan, Baoyin, Taogetao, Ho, Adrian, Jia, Zhongjun. Succession of bacterial community and methanotrophy during lake shrinkage. JOURNAL OF SOILS AND SEDIMENTS[J]. 2020, 20(3): 1545-1557, https://www.webofscience.com/wos/woscc/full-record/WOS:000534512900032.
[22] Jia, Zhongjun, Zhou, Xue, Xia, Weiwei, Fornara, Dario, Wang, Baozhan, Wasson, Elizabeth Anne, Christie, Peter, Polz, Martin F, Myrold, David D. Evidence for niche differentiation of nitrifying communities in grassland soils after 44 years of different field fertilization scenarios. PEDOSPHERE[J]. 2020, 30(1): 87-97, http://lib.cqvip.com/Qikan/Article/Detail?id=7101215280.
[23] Shiau, YoJin, Lin, ChiaoWen, Cai, Yuanfeng, Jia, Zhongjun, Lin, YuTe, Chiu, ChihYu. Niche Differentiation of Active Methane-Oxidizing Bacteria in Estuarine Mangrove Forest Soils in Taiwan. MICROORGANISMS[J]. 2020, 8(8): https://doaj.org/article/f843a976dd004bd9b01a9ddce5c72d82.
[24] Ning, Qi, Chen, Lin, Jia, Zhongjun, Zhang, Congzhi, Ma, Donghao, Li, Fang, Zhang, Jiabao, Li, Daming, Han, Xiaori, Cai, Zejiang, Huang, Shaomin, Liu, Wenzhao, Zhu, Bo, Li, Yan. Multiple long-term observations reveal a strategy for soil pH-dependent fertilization and fungal communities in support of agricultural production. AGRICULTURE ECOSYSTEMS & ENVIRONMENT[J]. 2020, 293: http://dx.doi.org/10.1016/j.agee.2020.106837.
[25] Kaupper, Thomas, Luehrs, Janita, Lee, Hyo Jung, Mo, Yongliang, Jia, Zhongjun, Horn, Marcus A, Ho, Adrian. Disentangling abiotic and biotic controls of aerobic methane oxidation during re-colonization. SOIL BIOLOGY & BIOCHEMISTRY[J]. 2020, 142: http://dx.doi.org/10.1016/j.soilbio.2020.107729.
[26] Faheem, Muhammad, Shabbir, Sadaf, Zhao, Jun, Kerr, Philip G, Ali, Shafaqat, Sultana, Nasrin, Jia, Zhongjun. Multifunctional Periphytic Biofilms: Polyethylene Degradation and Cd(2+)and Pb(2+)Bioremediation under High Methane Scenario. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES[J]. 2020, 21(15): https://www.webofscience.com/wos/woscc/full-record/WOS:000559014400001.
[27] Zhang, Yaohong, Zhang, Xinlei, Wang, Fangyuan, Xia, Weiwei, Jia, Zhongjun. Exogenous nitrogen addition inhibits sulfate-mediated anaerobic oxidation of methane in estuarine coastal sediments. ECOLOGICAL ENGINEERING[J]. 2020, 158: http://dx.doi.org/10.1016/j.ecoleng.2020.106021.
[28] 宋怡轩, 金锐, 张鑫磊, 张洁, 贾仲君, 张耀鸿. 围垦对崇明东滩湿地全程氨氧化微生物的影响. 土壤[J]. 2020, 52(6): 1196-1202, http://lib.cqvip.com/Qikan/Article/Detail?id=7103667087.
[29] 张鑫磊, 宋怡轩, 张洁, 汪方圆, 张耀鸿, 贾仲君. 围垦植稻对崇明东滩湿地产甲烷微生物的影响. 农业环境科学学报[J]. 2020, 39(2): 411-417, http://lib.cqvip.com/Qikan/Article/Detail?id=7100987891.
[30] Zhao, Jun, Cai, Yuanfeng, Jia, Zhongjun. The pH-based ecological coherence of active canonical methanotrophs in paddy soils. BIOGEOSCIENCES[J]. 2020, 17(6): 1451-1462, https://doaj.org/article/671a3a7ae1aa4263a5b6b7897f97bffb.
[31] 汪方圆, 张耀鸿, 饶旭东, 谢晴, 贾仲君. 围垦对滨海稻田土壤N2O还原潜力的影响. 农业环境科学学报. 2020, 39(11): 2668-2674, http://lib.cqvip.com/Qikan/Article/Detail?id=7103355965.
[32] Zheng, Yan, Hu, Xiaolong, Jia, Zhongjun, Bodelier, Paul L E, Guo, Zhiying, Zhang, Yong, Li, Fangli, He, Peixin. Co-occurrence patterns among prokaryotes across an age gradient in pit mud of Chinese strong-flavor liquor. CANADIAN JOURNAL OF MICROBIOLOGY[J]. 2020, 66(9): 495-504, https://www.webofscience.com/wos/woscc/full-record/WOS:000563781600001.
[33] Jia, Zhongjun, Myrold, David D, Conrad, Ralf. Soil biodiversity in a rapidly changing world Preface. PEDOSPHEREnull. 2020, 30(1): 1-4, https://www.webofscience.com/wos/woscc/full-record/WOS:000502751600001.
[34] Mo, Yongliang, Qi, Xinge, Li, Aorui, Zhang, Xinfang, Jia, Zhongjun. Active Methanotrophs in Suboxic Alpine Swamp Soils of the Qinghai-Tibetan Plateau. FRONTIERS IN MICROBIOLOGY[J]. 2020, 11: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7689253/.
[35] Zhang, Weiguo, Li, Jiangye, Wang, Chengcheng, Zhou, Xue, Gao, Yan, Jia, Zhongjun. Stable-isotope probing of bacterial community for dissolved inorganic carbon utilization in Microcystis aeruginosa-dominated eutrophic water. JOURNAL OF ENVIRONMENTAL SCIENCES[J]. 2019, 79: 264-272, http://lib.cqvip.com/Qikan/Article/Detail?id=72747566504849574853485052.
[36] Szoboszlay, Marton, Naether, Astrid, Liu, Bei, Carrillo, Angel, Castellanos, Thelma, Smalla, Kornelia, Jia, Zhongjun, Tebbe, Christoph C. Contrasting microbial community responses to salinization and straw amendment in a semiarid bare soil and its wheat rhizosphere. SCIENTIFIC REPORTS[J]. 2019, 9(1): http://dx.doi.org/10.1038/s41598-019-46070-6.
[37] Wang, Zhihui, Cao, Yanqiang, ZhuBarker, Xia, Nicol, Graeme W, Wright, Alan L, Jia, Zhongjun, Jiang, Xianjun. Comammox Nitrospira clade B contributes to nitrification in soil. SOIL BIOLOGY & BIOCHEMISTRY[J]. 2019, 135: 392-395, http://dx.doi.org/10.1016/j.soilbio.2019.06.004.
[38] Li, Yang, Wu, Zhaojun, Dong, Xingchen, Jia, Zhongjun, Sun, Qingye. Variance in bacterial communities, potential bacterial carbon sequestration and nitrogen fixation between light and dark conditions under elevated CO2 in mine tailings. SCIENCE OF THE TOTAL ENVIRONMENT[J]. 2019, 652: 234-242, http://www.corc.org.cn/handle/1471x/2205786.
[39] 刘天琳, 王智慧, 闫小娟, 赵永鹏, 贾仲君, 蒋先军. 稳定性同位素DNA-SIP示踪中性紫色土的氨氧化过程. 环境科学[J]. 2019, 40(6): 2930-2938, http://lib.cqvip.com/Qikan/Article/Detail?id=7002210150.
[40] Dong Xingchen, Zhang Jian, Qiu Huizhen, Zhang He, Luo Chaoyue, Deng Delei, Shen Qirong, Jia Zhongjun. Chronic Nitrogen Fertilization Modulates Competitive Interactions Among Microbial Ammonia Oxidizers in a Loess Soil. PEDOSPHERE[J]. 2019, 29(1): 24-33, http://lib.cqvip.com/Qikan/Article/Detail?id=84828189504849574849484851.
[41] 张鑫磊, 金锐, 杨镇, 田茂辉, 张耀鸿, 贾仲君. 长江口崇明东滩湿地微生物群落结构研究. 土壤通报[J]. 2019, 50(5): 1178-1184, http://lib.cqvip.com/Qikan/Article/Detail?id=7100994133.
[42] Harrabi, Malek, Alexandrino, Diogo A M, Aloulou, Fatma, Elleuch, Boubaker, Liu, Bei, Jia, Zhongjun, Almeida, C Marisa R, Mucha, Ana P, Carvalho, Maria F. Biodegradation of oxytetracycline and enrofloxacin by autochthonous microbial communities from estuarine sediments. SCIENCE OF THE TOTAL ENVIRONMENT[J]. 2019, 648: 962-972, http://dx.doi.org/10.1016/j.scitotenv.2018.08.193.
[43] Kui, Li, Sun, Hui, Lei, Qian, Gao, Wei, Bao, Lijun, Chen, Yuexi, Jia, Zhongjun. Soil microbial community assemblage and its seasonal variability in alpine treeline ecotone on the eastern Qinghai-Tibet Plateau. SOIL ECOLOGY LETTERS[J]. 2019, 1(1-2): 33-41, [44] Li, Yang, Wu, Zhaojun, Dong, Xingchen, Jia, Zhongjun, Sun, Qingye. Dependency of biological nitrogen fixation on organic carbon in acidic mine tailings under light and dark conditions. APPLIED SOIL ECOLOGY[J]. 2019, 140: 18-25, http://dx.doi.org/10.1016/j.apsoil.2019.04.002.
[45] Wang, Baozhan, Qin, Wei, Ren, Yi, Zhou, Xue, Jung, ManYoung, Han, Ping, EloeFadrosh, Emiley A, Li, Meng, Zheng, Yue, Lu, Lu, Yan, Xin, Ji, Junbin, Liu, Yang, Liu, Linmeng, Heiner, Cheryl, Hall, Richard, MartensHabbena, Willm, Herbold, Craig W, Rhee, Sungkeun, Bartlett, Douglas H, Huang, Li, Ingalls, Anitra E, Wagner, Michael, Stahl, David A, Jia, Zhongjun. Expansion of Thaumarchaeota habitat range is correlated with horizontal transfer of ATPase operons. ISME JOURNAL[J]. 2019, 13(12): 3067-3079, http://dx.doi.org/10.1038/s41396-019-0493-x.
[46] 万琪慧, 王书玲, 赵伟烨, 马黎华, 贾仲君, 蒋先军. 重庆紫色水稻土中“全程”和“半程”氨氧化微生物的垂直分异. 微生物学报. 2019, 59(2): 291-302, http://lib.cqvip.com/Qikan/Article/Detail?id=7001193651.
[47] Zhihui Wang, Yanqiang Cao, Xia ZhuBarker, Graeme W Nicol, Alan L Wright, Zhongjun Jia, Xianjun Jiang. Comammox Nitrospira clade B contributes to nitrification in soil. Soil Biology and Biochemistry. 2019, 135: 392-395, http://dx.doi.org/10.1016/j.soilbio.2019.06.004.
[48] Wang, Mengzi, Wang, Shanyun, Long, Xien, Zhuang, Linjie, Zhao, Xue, Jia, Zhongjun, Zhu, Guibing. High contribution of ammonia-oxidizing archaea (AOA) to ammonia oxidation related to a potential active AOA species in various arable land soils. JOURNAL OF SOILS AND SEDIMENTS[J]. 2019, 19(3): 1077-1087, http://dx.doi.org/10.1007/s11368-018-2108-y.
[49] Liu, Haiyang, Pan, Hong, Hu, Hangwei, Jia, Zhongjun, Zhang, Qian, Liu, Yimeng, Xu, Jianming, Di, Hongjie, Li, Yong. Autotrophic archaeal nitrification is preferentially stimulated by rice callus mineralization in a paddy soil. PLANT AND SOIL[J]. 2019, 445(1-2): 55-69, http://dx.doi.org/10.1007/s11104-019-04164-0.
[50] Weiguo Zhang, Jiangye Li, Chengcheng Wang, Xue Zhou, Yan Gao, Zhongjun Jia. Stable-isotope probing of bacterial community for dissolved inorganic carbon utilization in Microcystis aeruginosa-dominated eutrophic water. 环境科学学报:英文版[J]. 2019, 264-272, http://lib.cqvip.com/Qikan/Article/Detail?id=72747566504849574853485052.
[51] Li, Yang, Wu, Zhaojun, Dong, Xingchen, Xu, Zifu, Zhang, Qixin, Su, Haiyan, Jia, Zhongjun, Sun, Qingye. Pyrite oxidization accelerates bacterial carbon sequestration in copper mine tailings. Biogeosciences[J]. 2019, 16(2): 573-583, https://doaj.org/article/7e177b002a144532be4ec17e2fee7d71.
[52] 莫永亮, 郑燕, 金凤, 宝音陶格涛, 贾仲君. 内蒙古岗更诺尔湖泊退化情景下好氧甲烷氧化的微生物过程研究. 微生物学报[J]. 2019, 59(6): 1105-1115, http://lib.cqvip.com/Qikan/Article/Detail?id=7002209585.
[53] 王玉芳, 蔡元锋, 侯扶江, 贾仲君, Saman Bowatte. 典型草地土壤好氧甲烷氧化的微生物生态过程. 微生物学报[J]. 2019, 59(6): 1116-1126, http://lib.cqvip.com/Qikan/Article/Detail?id=7002209586.
[54] Wang, Peiyan, DImperio, Ludovica, Liu, Bei, Tian, Qingjiu, Jia, Zhongjun, Ambus, Per, Rasch, Morten, Elberling, Bo. Sea animal activity controls CO2, CH4 and N2O emission hotspots on South Georgia, sub-Antarctica. SOIL BIOLOGY & BIOCHEMISTRY[J]. 2019, 132: 174-186, http://dx.doi.org/10.1016/j.soilbio.2019.02.002.
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[124] 任改弟, 张华勇, 林先贵, 朱建国, 贾仲君. 水稻根系内生细菌对未来大气CO_2浓度升高的响应. 土壤学报[J]. 2013, 50(6): 1162-1169, [125] 韩文炎, 王皖蒙, 郭赟, 杨明臻, 贾仲君. 茶园土壤细菌丰度及其影响因子研究. 茶叶科学[J]. 2013, 33(2): 147-154, [126] Lu, Lu, Jia, Zhongjun. Urease gene-containing Archaea dominate autotrophic ammonia oxidation in two acid soils. ENVIRONMENTAL MICROBIOLOGY[J]. 2013, 15(6): 1795-1809, https://www.webofscience.com/wos/woscc/full-record/WOS:000319873300011.
[127] Wu, Yucheng, Ke, Xiubin, Hernandez, Marcela, Wang, Baozhan, Dumont, Marc G, Jia, Zhongjun, Conrad, Ralf. Autotrophic Growth of Bacterial and Archaeal Ammonia Oxidizers in Freshwater Sediment Microcosms Incubated at Different Temperatures. APPLIED AND ENVIRONMENTAL MICROBIOLOGY[J]. 2013, 79(9): 3076-3084, https://www.webofscience.com/wos/woscc/full-record/WOS:000317474800026.
[128] 王皖蒙, 许科伟, 任春, 杨帆, 李定龙, 贾仲君. 基于实时荧光定量PCR技术的油气微生物勘探样品保存研究. 土壤[J]. 2013, 45(1): 129-134, [129] 宋长青, 吴金水, 陆雅海, 沈其荣, 贺纪正, 黄巧云, 贾仲君, 冷疏影, 朱永官. 中国土壤微生物学研究10年回顾. 地球科学进展[J]. 2013, 10(1): 1087-1105, http://www.irgrid.ac.cn/handle/1471x/930319.
[130] Peng, Jingjing, Zhang, Yuan, Su, Jianqiang, Qiu, Qiongfen, Jia, Zhongjun, Zhu, YongGuan. Bacterial communities predominant in the degradation of C-13(4)-4,5,9,10-pyrene during composting. BIORESOURCE TECHNOLOGY[J]. 2013, 143(1): 608-614, http://dx.doi.org/10.1016/j.biortech.2013.06.039.
[131] Jiang, Xianjun, Liu, Wei, Liu, Qin, Jia, Zhongjun, Wright, Alan L, Cao, Zhihong. Soil N mineralization, nitrification and dynamic changes in abundance of ammonia-oxidizing bacteria and archaea along a 2000 year chronosequence of rice cultivation. PLANT AND SOIL[J]. 2013, 365(1-2): 59-68, http://dx.doi.org/10.1007/s11104-012-1377-2.
[132] Sun, Mingming, Luo, Yongming, Teng, Ying, Christie, Peter, Jia, Zhongjun, Li, Zhengao. Tenax TA extraction to understand the rate-limiting factors in methyl-beta-cyclodextrin-enhanced bioremediation of PAH-contaminated soil. BIODEGRADATION[J]. 2013, 24(3): 365-375, https://www.webofscience.com/wos/woscc/full-record/WOS:000318278000006.
[133] 蔡元锋, 贾仲君. 基于新一代高通量测序的环境微生物转录组学研究进展. 生物多样性[J]. 2013, 21(4): 401-410, [134] 孙明明, 滕应, 骆永明, 李振高, 贾仲君, 张满云. 甲基β环糊精对污染场地土壤中多环芳烃的异位增效洗脱修复研究. 环境科学[J]. 2013, 34(6): 2428-2435, http://www.irgrid.ac.cn/handle/1471x/671190.
[135] 严陈, 许静, 钟文辉, 林毅, 林先贵, 朱建国, 贾仲君. 大气CO_2浓度升高对稻田根际土壤甲烷氧化细菌丰度的影响. 生态学报[J]. 2013, 33(6): 1881-1888, [136] Liu, Deyan, Ding, Weixin, Jia, Zhongjun, Cai, Zucong. The impact of dissolved organic carbon on the spatial variability of methanogenic archaea communities in natural wetland ecosystems across China. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY[J]. 2012, 96(1): 253-263, [137] WANG Bao-Zhan, ZHANG Cai-Xia, LIU Ji-Liang, ZENG Xiao-Wei, LI Feng-Rui, WU Yu-Cheng, LIN Xian-Gui, XIONG Zheng-Qin, XU Jian, JIA Zhong-Jun. Microbial Community Changes Along a Land-Use Gradient of Desert Soil Origin. 土壤圈:英文版. 2012, 22(5): 593-603, http://lib.cqvip.com/Qikan/Article/Detail?id=43099074.
[138] 贾仲君. 基于实时荧光定量PCR技术的微生物勘探样品保存策略初探.. 土壤. 2012, [139] Yucheng eWu, Yun eGuo, Xiangui eLin, Wenhui eZhong, Zhongjun eJia. Inhibition of bacterial ammonia oxidation by organohydrazines in soil microcosms. Frontiers in Microbiology[J]. 2012, 3: https://doaj.org/article/78cb002a157a4a618cb854ac910c3e0d.
[140] 郭赟, 吴宇澄, 林先贵, 钟文辉, 丁维新, 贾仲君, 贾仲君. 3次连续重复提取DNA能较好反映土壤微生物丰度. 微生物学报[J]. 2012, 52(7): 894-901, http://lib.cqvip.com/Qikan/Article/Detail?id=42432894.
[141] Feng, Youzhi, Lin, Xiangui, Jia, Zhongjun, Zhu, Jianguo. Identification of Formate-Metabolizing Bacteria in Paddy Soil by DNA-Based Stable Isotope Probing. SOIL SCIENCE SOCIETY OF AMERICA JOURNAL[J]. 2012, 76(1): 121-129, https://www.webofscience.com/wos/woscc/full-record/WOS:000299220200013.
[142] 黄蓉, 张金波, 钟文辉, 贾仲君, 蔡祖聪. 土地利用方式对万木林土壤氨氧化微生物丰度的影响. 土壤[J]. 2012, 44(4): 581-587, http://lib.cqvip.com/Qikan/Article/Detail?id=42900788.
[143] Alam, M Saiful, Jia, Zhongjun. Inhibition of methane oxidation by nitrogenous fertilizers in a paddy soil. FRONTIERS IN MICROBIOLOGY[J]. 2012, 3: https://doaj.org/article/56657f369ee5429cbdcb27f614f39e45.
[144] Lu, Lu, Han, Wenyan, Zhang, Jinbo, Wu, Yucheng, Wang, Baozhan, Lin, Xiangui, Zhu, Jianguo, Cai, Zucong, Jia, Zhongjun. Nitrification of archaeal ammonia oxidizers in acid soils is supported by hydrolysis of urea. ISME JOURNAL[J]. 2012, 6(10): 1978-1984, https://www.webofscience.com/wos/woscc/full-record/WOS:000309056300015.
[145] Sun, Mingming, Luo, Yongming, Christie, Peter, Jia, Zhongjun, Li, Zhengao, Teng, Ying. Methyl-beta-cyclodextrin enhanced biodegradation of polycyclic aromatic hydrocarbons and associated microbial activity in contaminated soil. JOURNAL OF ENVIRONMENTAL SCIENCES[J]. 2012, 24(5): 926-933, https://www.webofscience.com/wos/woscc/full-record/WOS:000304632700021.
[146] Wu, Yucheng, Guo, Yun, Lin, Xiangui, Zhong, Wenhui, Jia, Zhongjun. Ihibition of bacterial ammonia oxidation by organohydrazines in soil microcosms. FRONTIERS IN MICROBIOLOGY[J]. 2012, 3: http://dx.doi.org/10.3389/fmicb.2012.00010.
[147] Huang, Rong, Wu, Yucheng, Zhang, Jinbo, Zhong, Wenhui, Jia, Zhongjun, Cai, Zucong. Nitrification activity and putative ammonia-oxidizing archaea in acidic red soils. JOURNAL OF SOILS AND SEDIMENTS[J]. 2012, 12(3): 420-428, https://www.webofscience.com/wos/woscc/full-record/WOS:000302417700013.
[148] 许静, 严陈, 林毅, 钟文辉, 林先贵, 朱建国, 贾仲君. FACE对水稻土产甲烷古菌丰度的影响. 土壤学报[J]. 2012, 49(6): 1247-1251, [149] Sun Mingming, Luo Yongming, Peter Christie, Jia Zhongjun, Li Zhengao, Ying Teng. Methyl-β-cyclodextrin enhanced biodegradation of polycyclic aromatic hydrocarbons and associated microbial activity in contaminated soil. Journal of Environmental Sciences[J]. 2012, 24(5): 926-933, http://lib.cqvip.com/Qikan/Article/Detail?id=42101365.
[150] Wang BaoZhan, Zhang CaiXia, Liu JiLiang, Zeng XiaoWei, Li FengRui, Wu YuCheng, Lin XianGui, Xiong ZhengQin, Xu Jian, Jia ZhongJun. Microbial Community Changes Along a Land-Use Gradient of Desert Soil Origin. PEDOSPHERE[J]. 2012, 22(5): 593-603, http://lib.cqvip.com/Qikan/Article/Detail?id=43099074.
[151] Zhang, Jinbo, Cai, Zucong, Yang, Wenyan, Zhu, Tongbin, Yu, Yongjie, Yan, Xiaoyuan, Jia, Zhongjun. Long-term field fertilization affects soil nitrogen transformations in a rice-wheat-rotation cropping system. JOURNAL OF PLANT NUTRITION AND SOIL SCIENCE[J]. 2012, 175(6): 939-946, https://www.webofscience.com/wos/woscc/full-record/WOS:000311855400019.
[152] 李晨华, 贾仲君, 唐立松, 吴宇澄, 李彦. 不同施肥模式对绿洲农田土壤微生物群落丰度与酶活性的影响. 土壤学报[J]. 2012, 49(3): 567-574, http://lib.cqvip.com/Qikan/Article/Detail?id=41878673.
[153] 贾仲君. 稳定性同位素核酸探针技术DNA-SIP原理与应用. 微生物学报[J]. 2011, 51(12): 1585-1594, http://lib.cqvip.com/Qikan/Article/Detail?id=40161219.
[154] Xia, Weiwei, Zhang, Caixia, Zeng, Xiaowei, Feng, Youzhi, Weng, Jiahua, Lin, Xiangui, Zhu, Jianguo, Xiong, Zhengqin, Xu, Jian, Cai, Zucong, Jia, Zhongjun. Autotrophic growth of nitrifying community in an agricultural soil. ISME JOURNAL[J]. 2011, 5(7): 1226-1236, http://ir.qibebt.ac.cn/handle/337004/6544.
[155] Wu, Yucheng, Lu, Lu, Wang, Baozhan, Lin, Xiangui, Zhu, Jianguo, Cai, Zucong, Yan, Xiaoyuan, Jia, Zhongjun. Long-Term Field Fertilization Significantly Alters Community Structure of Ammonia-Oxidizing Bacteria rather than Archaea in a Paddy Soil. SOIL SCIENCE SOCIETY OF AMERICA JOURNAL[J]. 2011, 75(4): 1431-1439, https://www.webofscience.com/wos/woscc/full-record/WOS:000293076400024.
[156] Weiwei Xia, Caixia Zhang, Xiaowei Zeng, Youzhi Feng, Jiahua Weng, Xiangui Lin, Jianguo Zhu, Zhengqin Xiong, Jian Xu, Zucong Cai, Zhongjun Jia. Autotrophic growth of nitrifying community in an agricultural soil. The ISME Journal. 2011, 5(7): 1226-1236, https://www.webofscience.com/wos/woscc/full-record/WOS:000295688500015.
[157] Avrahami, Sharon, Jia, Zhongjun, Neufeld, Josh D, Murrell, J Colin, Conrad, Ralf, Kuesel, Kirsten. Active Autotrophic Ammonia-Oxidizing Bacteria in Biofilm Enrichments from Simulated Creek Ecosystems at Two Ammonium Concentrations Respond to Temperature Manipulation. APPLIED AND ENVIRONMENTAL MICROBIOLOGY[J]. 2011, 77(20): 7329-7338, https://www.webofscience.com/wos/woscc/full-record/WOS:000295836700032.
[158] Feng, Youzhi, Lin, Xiangui, Zhu, Jianguo, Jia, Zhongjun. A phototrophy-driven microbial food web in a rice soil. JOURNAL OF SOILS AND SEDIMENTS[J]. 2011, 11(2): 301-311, https://www.webofscience.com/wos/woscc/full-record/WOS:000286435100010.
[159] 贾仲君, 翁佳华, 林先贵, Ralf Conrad. 氨氧化古菌的生态学研究进展. 微生物学报[J]. 2010, 431-437, http://lib.cqvip.com/Qikan/Article/Detail?id=33621475.
[160] Jia, Zhongjun, Conrad, Ralf. Bacteria rather than Archaea dominate microbial ammonia oxidation in an agricultural soil. ENVIRONMENTAL MICROBIOLOGY[J]. 2009, 11(7): 1658-1671, https://www.webofscience.com/wos/woscc/full-record/WOS:000267660700004.
[161] 贾仲君, 蔡祖聪. 水稻植株对稻田甲烷排放的影响. 应用生态学报. 2003, 14(11): 2049-2053, http://lib.cqvip.com/Qikan/Article/Detail?id=8563709.
[162] 贾仲君, 蔡祖聪. 稻田甲烷氧化与铵氧化关系研究进展. 农村生态环境. 2003, 19(4): 40-44, http://lib.cqvip.com/Qikan/Article/Detail?id=8524979.
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[165] Lu Lu, Han Wenyan, Zhang Jinbo, Wu Yucheng, Wang Baozhan, Lin Xiangui, Zhu Jianguo, Cai Zucong, Jia Zhongjun. Nitrification of archaeal ammonia oxidizers in acid soils is supported by hydrolysis of urea. The ISME Journal. 6(10): 1978-1984, https://www.webofscience.com/wos/woscc/full-record/WOS:000309056300015.
[166] Weiguo Zhang, Jiangye Li, Chengcheng Wang, Xue Zhou, Yan Gao, Zhongjun Jia. Stable-isotope probing of bacterial community for DIC utilization in Microcystis aeruginosa-dominated eutrophic water. Journal of Environmental Sciences. http://dx.doi.org/10.1016/j.jes.2018.11.006.
发表著作
(1) 土壤微生物研究原理与方法, Principles and Methods of Soil Microbiology Research, 高等教育出版社, 2010-03, 第 2 作者

科研活动

   
科研项目
( 1 ) 典型稻田土壤氧化还原梯度下微生物群落的演变特征, 主持, 国家级, 2011-01--2014-12
( 2 ) 稻田甲烷排放的微生物调控机制研究, 主持, 国家级, 2011-01--2014-01
( 3 ) 土壤硝化微生物生理生态过程的分子调控机制, 主持, 省级, 2012-07--2015-07
( 4 ) 稳定性同位素示踪环境微生物核酸DNA的方法研究, 主持, 国家级, 2013-01--2016-12
( 5 ) 土壤微生物研究的新技术及应用, 主持, 部委级, 2014-06--2019-05
( 6 ) 氨氧化古菌和细菌适应土壤地理环境分异的共存机制研究, 主持, 国家级, 2016-01--2020-12
( 7 ) 高产旱地土壤微生物区系特征及其与有机质积累的关系研究, 主持, 国家级, 2015-01--2019-08

指导学生

已指导学生

任改弟  博士研究生  083001-环境科学  

孙明明  博士研究生  071012-生态学  

郑燕  博士研究生  083001-环境科学  

夏围围  博士研究生  083001-环境科学  

路璐  博士研究生  083001-环境科学  

郭志英  硕士研究生  071012-生态学  

包丽君  硕士研究生  077601-环境科学  

周雪  博士研究生  083001-环境科学  

赵俊  博士研究生  083001-环境科学  

张慧敏  硕士研究生  077601-环境科学  

刘蓓  硕士研究生  077601-环境科学  

莫永亮  博士研究生  083001-环境科学  

高威  博士研究生  083001-环境科学  

孙祥鑫  博士研究生  083001-环境科学  

杨丽洁  硕士研究生  077601-环境科学  

宋玉翔  硕士研究生  090301-土壤学  

康辰光  硕士研究生  085229-环境工程  

现指导学生

曹伟伟  博士研究生  083001-环境科学  

宋玉翔  博士研究生  083001-环境科学  

胡耀华  硕士研究生  077602-环境工程