基本信息
马迎飞  男  博导  中国科学院深圳先进技术研究院
电子邮件: yingfei.ma@siat.ac.cn
通信地址: 广东省深圳市南山区西丽大学城学苑大道1068号
邮政编码: 518055

研究领域

微生物学,宏基因组学,生物信息学


招生信息

   
招生专业
071005-微生物学
071022-基因组学
071021-生物信息学
招生方向
微生物学,宏基因组学,生物信息学
噬菌体

教育背景

2009-06--2011-04   加州大学圣迭戈分校   博士后
2005-09--2009-04   中国科学院微生物研究所   博士
2001-09--2004-07   山东农业大学   硕士
1997-09--2001-07   山东农业大学   学士

工作经历

   
工作简历
2015-09~现在, 中国科学院深圳先进技术研究院, 副研究员
2011-05~2015-09,纽约大学医学院, 研究科学家

专利与奖励

   
专利成果
[1] 马迎飞, 黄志鹏, 邓康裕. 噬菌体冻干粉制剂及其制备方法、保存方法和应用. CN: CN113230215A, 2021-08-10.

[2] 周泳屹, 马迎飞, 郭顺, 范小朋. 一种基因序列拼接方法及应用. CN: CN112599195A, 2021-04-02.

[3] 马迎飞, 袁盛建. 基于无细胞表达体系的噬菌体基因组拯救方法及其应用. CN: CN112553170A, 2021-03-26.

[4] 马迎飞, 陈玲, 袁盛建. 杀鲑气单胞菌噬菌体、包含其的杀菌组合物及其应用. CN: CN107119025B, 2020-08-25.

[5] 马迎飞, 樊继强, 王婧婷, 陈玲, 刘陈立. 裂性弧菌噬菌体ValDsh-1及包含该噬菌体的杀菌组合物及其应用. CN: CN108070570A, 2018-05-25.

[6] 马迎飞, 樊继强, 王婧婷, 陈玲, 刘陈立. 裂性弧菌噬菌体ValLY-4及包含该噬菌体的杀菌组合物及其应用. CN: CN108048412A, 2018-05-18.

[7] 马迎飞, 樊继强, 王婧婷, 陈玲, 刘陈立. 裂性弧菌噬菌体VspSw-1及包含该噬菌体的杀菌组合物及其应用. CN: CN108048410A, 2018-05-18.

[8] 马迎飞, 樊继强, 王婧婷, 陈玲, 刘陈立. 裂性弧菌噬菌体ValLY-3及包含该噬菌体的杀菌组合物及其应用. CN: CN108048409A, 2018-05-18.

[9] 马迎飞, 樊继强, 王婧婷, 陈玲, 刘陈立. 裂性弧菌噬菌体ValLY-2及包含该噬菌体的杀菌组合物及其应用. CN: CN108048411A, 2018-05-18.

[10] 马迎飞, 樊继强, 王婧婷, 陈玲, 刘陈立. 裂性弧菌噬菌体ValSw4-1及包含该噬菌体的杀菌组合物及其应用. CN: CN107988171A, 2018-05-04.

[11] 马迎飞, 樊继强, 王婧婷, 陈玲, 刘陈立. 裂性弧菌噬菌体VpaJT-1及包含该噬菌体的杀菌组合物及其应用. CN: CN107988172A, 2018-05-04.

[12] 马迎飞, 陈玲, 樊继强. 溶藻弧菌噬菌体及包含该噬菌体的杀菌组合物. CN: CN107904213A, 2018-04-13.

[13] 马迎飞, 陈玲, 樊继强. 副溶血弧菌噬菌体及包含该噬菌体的杀菌组合物. CN: CN107904211A, 2018-04-13.

[14] 马迎飞, 陈玲, 樊继强. 溶藻弧菌噬菌体及包含该噬菌体的杀菌组合物. CN: CN107904212A, 2018-04-13.

[15] 马迎飞, 陈玲, 樊继强. 溶藻弧菌噬菌体及包含该噬菌体的杀菌组合物. CN: CN107904214A, 2018-04-13.

[16] 马迎飞, 陈玲, 樊继强. 溶藻弧菌噬菌体及包含该噬菌体的杀菌组合物. CN: CN107805629A, 2018-03-16.

[17] 马迎飞, 陈玲, 樊继强. 副溶血弧菌噬菌体及包含该噬菌体的杀菌组合物. CN: CN107805630A, 2018-03-16.

[18] 马迎飞, 陈玲, 袁盛建. 杀鲑气单胞菌噬菌体、包含其的杀菌组合物及其应用. CN: CN107129972A, 2017-09-05.

[19] 马迎飞, 陈玲, 袁盛建. 杀鲑气单胞菌噬菌体、包含其的杀菌组合物及其应用. CN: CN107119024A, 2017-09-01.

[20] 马迎飞, 陈玲, 袁盛建. 杀鲑气单胞菌噬菌体、包含其的杀菌组合物及其应用. CN: CN107099509A, 2017-08-29.

[21] 马迎飞, 陈玲, 袁盛建. 杀鲑气单胞菌噬菌体、包含其的杀菌组合物及其应用. CN: CN107022529A, 2017-08-08.

[22] 马迎飞, 樊继强, 麦国琴. 一种空气微生物采样装置. CN: CN106497782A, 2017-03-15.

出版信息

   
发表论文
[1] Ian Ganly, Zhiheng Pei, Yuhan Hao, Yingfei Ma, Matthew Rosenthal, Zhenglin Wu, Jocelyn Migliacci, Bin Huang, Nora Katabi, Wenzhi Tseng, Stuart Brown, YiWei Tang, Liying Yang. Case control study comparing the HPV genome in patients with oral cavity squamous cell carcinoma to normal patients using metagenomic shotgun sequencing. SCIENTIFIC REPORTS[J]. 2021, 11(1): https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7886861/.
[2] Tan, Xin, Chen, Huaisheng, Zhang, Min, Zhao, Ying, Jiang, Yichun, Liu, Xueyan, Huang, Wei, Ma, Yingfei. Clinical Experience of Personalized Phage Therapy Against Carbapenem-Resistant Acinetobacter baumannii Lung Infection in a Patient With Chronic Obstructive Pulmonary Disease. FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY[J]. 2021, 11: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7952606/.
[3] 袁盛建, 马迎飞. 噬菌体合成生物学研究进展和应用. 合成生物学. 2020, 1(6): 635-655, http://lib.cqvip.com/Qikan/Article/Detail?id=7103713714.
[4] Chen, Ling, Liu, Quan, Fan, Jiqiang, Yan, Tingwei, Zhang, Haoran, Yang, Jinfang, Deng, Deng, Liu, Chaolan, Wei, Ting, Ma, Yingfei. Characterization and Genomic Analysis of ValSw3-3, a New Siphoviridae Bacteriophage Infecting Vibrio alginolyticus. JOURNAL OF VIROLOGY[J]. 2020, 94(10): http://dx.doi.org/10.1128/JVI.00066-20.
[5] Wen, Lingling, Chen, Ling, Yuan, Shengjian, Tian, Linyu, Yan, Tingwei, Zhang, Haoran, Tan, Yang, Yu, Yue, Wen, Hui, Ma, Yingfei, Wei, Ting, Huang, Shuqiang. Complete genome analysis of PaGz-1 and PaZq-1, two novel phages belonging to the genusPakpunavirus. ARCHIVES OF VIROLOGY[J]. 2020, 165(10): 2393-2396, https://www.webofscience.com/wos/woscc/full-record/WOS:000552938200003.
[6] Chen, Yijing, Fang, Lihua, Chen, Shuo, Zhou, Haokui, Fan, Yingying, Lin, Li, Li, Jing, Xu, Jinying, Chen, Yuewen, Ma, Yingfei, Chen, Yu. Gut Microbiome Alterations Precede Cerebral Amyloidosis and Microglial Pathology in a Mouse Model of Alzheimer's Disease. BIOMED RESEARCH INTERNATIONAL[J]. 2020, 2020: https://doaj.org/article/fb16f83bda19424aae44eb69492030ed.
[7] 周燕, 袁盛建, 严庭玮, 马迎飞. 一株新型杀鲑气单胞菌烈性类T4噬菌体Asfd-1的分离鉴定和生物学特性分析. 集成技术. 2019, 10-18, http://lib.cqvip.com/Qikan/Article/Detail?id=74677473504849574851484850.
[8] Chen, Ling, Fan, Jiqiang, Yan, Tingwei, Liu, Quan, Yuan, Shengjian, Zhang, Haoran, Yang, Jinfang, Deng, Deng, Huang, Shuqiang, Ma, Yingfei. Isolation and Characterization of Specific Phages to Prepare a Cocktail Preventing Vibrio sp. Va-F3 Infections in Shrimp (Litopenaeus vannamei). FRONTIERS IN MICROBIOLOGY[J]. 2019, 10: http://dx.doi.org/10.3389/fmicb.2019.02337.
[9] Chen, Ling, Guan, Guoye, Liu, Quan, Yuan, Shengjian, Yan, Tingwei, Tian, Linyu, Zhou, Yan, Zhao, Yixuan, Ma, Yingfei, Wei, Ting, Fu, Xiongfei. Characterization and complete genomic analysis of two Salmonella phages, SenALZ1 and SenASZ3, new members of the genus Cba120virus. ARCHIVES OF VIROLOGY[J]. 2019, 164(5): 1475-1478, https://www.webofscience.com/wos/woscc/full-record/WOS:000464758100026.
[10] Mai, Guoqin, Chen, Limei, Li, Ran, Liu, Quan, Zhang, Haoran, Ma, Yingfei. Common Core Bacterial Biomarkers of Bladder Cancer Based on Multiple Datasets. BioMed Research International[J]. 2019, 2019: https://doaj.org/article/38ec7b4e739f4b328ded6b58cd33ac58.
[11] Cui, Jinming, Mai, Guoqin, Wang, Zuowei, Liu, Quan, Zhou, Van, Ma, Yingfei, Liu, Chenli. Metagenomic Insights Into a Cellulose-Rich Niche Reveal Microbial Cooperation in Cellulose Degradation. FRONTIERS IN MICROBIOLOGY[J]. 2019, 10: https://doaj.org/article/d8dbc53938464ff28c41a0a5485651d6.
[12] Fan, Jiqiang, Chen, Limei, Mai, Guoqin, Zhang, Haoran, Yang, Jinfang, Deng, Deng, Ma, Yingfei. Dynamics of the gut microbiota in developmental stages of Litopenaeus vannamei reveal its association with body weight. SCIENTIFIC REPORTS[J]. 2019, 9(1): https://doaj.org/article/1210e0333cbf4a3eaf0c32142e753fc5.
[13] 刘陈立, 崔金明, 张炳照, 马迎飞, 傅雄飞, 王猛. 合成生物学研究的工程化平台. 中国科学院院刊[J]. 2018, 33(11): 1249-1257, http://lib.cqvip.com/Qikan/Article/Detail?id=676797252.
[14] Ma, Yingfei, You, Xiaoyan, Mai, Guoqin, Tokuyasu, Taku, Liu, Chenli. A human gut phage catalog correlates the gut phageome with type 2 diabetes. MICROBIOME[J]. 2018, 6(1): http://ir.siat.ac.cn:8080/handle/172644/13417.
[15] Yang, Zhenlong, Yuan, Shengjian, Chen, Ling, Liu, Quan, Zhang, Haoran, Ma, Yingfei, Wei, Ting, Huang, Shusiiang. Complete genome analysis of bacteriophage AsXd-1, a new member of the genus Hk97virus, family Siphoviridae. ARCHIVES OF VIROLOGY[J]. 2018, 163(11): 3195-3197, http://ir.siat.ac.cn:8080/handle/172644/13439.
[16] Wang, Dailian, Chen, Zhicong, Lin, Fan, Wang, Ziqiang, Gao, Qunjun, Xie, Haibiao, Xiao, Huizhong, Zhou, Yifan, Zhang, Fuyou, Ma, Yingfei, Mei, Hongbin, Cai, Zhiming, Liu, Yuchen, Huang, Weiren. OIP5 Promotes Growth, Metastasis and Chemoresistance to Cisplatin in Bladder Cancer Cells. JOURNAL OF CANCER[J]. 2018, 9(24): 4684-4695, http://ir.siat.ac.cn:8080/handle/172644/14891.
[17] Yuan, Shengjian, Chen, Ling, Liu, Quan, Zhou, Yan, Yang, Jingfang, Deng, Deng, Li, Hongping, Ma, Yingfei. Characterization and genomic analyses of Aeromonas hydrophila phages AhSzq-1 and AhSzw-1, isolates representing new species within the T5virus genus. ARCHIVES OF VIROLOGY[J]. 2018, 163(7): 1985-1988, http://ir.siat.ac.cn:8080/handle/172644/13425.
[18] Hayes, Richard B, Ahn, Jiyoung, Fan, Xiaozhou, Peters, Brandilyn A, Ma, Yingfei, Yang, Liying, Agalliu, Ilir, Burk, Robert D, Ganly, Ian, Purdue, Mark P, Freedman, Neal D, Gapstur, Susan M, Pei, Zhiheng. Association of Oral Microbiome With Risk for Incident Head and Neck Squamous Cell Cancer. JAMA ONCOLOGY[J]. 2018, 4(3): 358-365, http://ir.siat.ac.cn:8080/handle/172644/13421.
[19] Chen, Ling, Yuan, Shengjian, Liu, Quan, Mai, Guoqin, Yang, Jinfang, Deng, Deng, Zhang, Bingzhao, Liu, Chenli, Ma, Yingfei. In Vitro Design and Evaluation of Phage Cocktails Against Aeromonas salmonicida. FRONTIERS IN MICROBIOLOGY[J]. 2018, 9: http://ir.siat.ac.cn:8080/handle/172644/13424.
[20] Cui, J, Xiao, M, Liu, M, Wang, Z, Liu, F, Guo, L, Meng, H, Zhang, H, Yang, J, Deng, D, Huang, S, Ma, Y, Liu, C. Coupling metagenomics with cultivation to select host-specific probiotic micro-organisms for subtropical aquaculture. JOURNAL OF APPLIED MICROBIOLOGY[J]. 2017, 123(5): 1274-1285, https://www.webofscience.com/wos/woscc/full-record/WOS:000413317600019.
[21] 马迎飞. 人体肠道病毒组学研究进展. 微生物学报. 2016, [22] Sun, Yang, Ma, Yingfei, Lin, Ping, Tang, YiWei, Yang, Liying, Shen, Yinzhong, Zhang, Renfan, Liu, Li, Cheng, Jun, Shao, Jiashen, Qi, Tangkai, Tang, Yan, Cai, Rentian, Guan, Liqian, Luo, Bin, Sun, Meiyan, Li, Ben, Pei, Zhiheng, Lu, Hongzhou. Fecal bacterial microbiome diversity in chronic HIV-infected patients in China. EMERGING MICROBES & INFECTIONS[J]. 2016, 5(4): e31-, https://www.webofscience.com/wos/woscc/full-record/WOS:000375120700002.
[23] 马迎飞. Fast disease progression in SHIV infected female macaques is accompanied by a robust local inflammatory innate immune and microbial response.. AIDS. 2015, [24] Ma, Yingfei, Madupu, Ramana, Karaoz, Ulas, Nossa, Carlos W, Yang, Liying, Yooseph, Shibu, Yachimski, Patrick S, Brodie, Eoin L, Nelson, Karen E, Pei, Zhiheng. Human Papillomavirus Community in Healthy Persons, Defined by Metagenomics Analysis of Human Microbiome Project Shotgun Sequencing Data Sets. JOURNAL OF VIROLOGY[J]. 2014, 88(9): 4786-4797, http://dx.doi.org/10.1128/JVI.00093-14.
[25] Ma, Yingfei, Allen, Lisa Zeigler, Palenik, Brian. Diversity and genome dynamics of marine cyanophages using metagenomic analyses. ENVIRONMENTAL MICROBIOLOGY REPORTS[J]. 2014, 6(6): 583-594, http://dx.doi.org/10.1111/1758-2229.12160.
[26] Ma, Yingfei, Paulsen, Ian T, Palenik, Brian. Analysis of two marine metagenomes reveals the diversity of plasmids in oceanic environments. ENVIRONMENTAL MICROBIOLOGY[J]. 2012, 14(2): 453-466, http://dx.doi.org/10.1111/j.1462-2920.2011.02633.x.
[27] Ma, YingFei, Zhang, Yun, Zhang, JiaYue, Chen, DongWei, Zhu, Yongqian, Zheng, Huajun, Wang, ShengYue, Jiang, ChengYing, Zhao, GuoPing, Liu, ShuangJiang. The Complete Genome of Comamonas testosteroni Reveals Its Genetic Adaptations to Changing Environments. APPLIED AND ENVIRONMENTAL MICROBIOLOGY[J]. 2009, 75(21): 6812-6819, http://dx.doi.org/10.1128/AEM.00933-09.
[28] Shuang-Jiang Liu. Nucleotide sequence of plasmid pCNB1 from Comamonas sp. strain CNB-1 reveals novel genetic organization and evolution for 4-chloronitrobenzene degradation. Applied and Environmental Microbiology, 7: 4477-4483. 2007, [29] Ma, YF, Wang, L, Shao, ZZ. Pseudomonas, the dominant polycyclic aromatic hydrocarbon-degrading bacteria isolated from Antarctic soils and the role of large plasmids in horizontal gene transfer. ENVIRONMENTAL MICROBIOLOGY[J]. 2006, 8(3): 455-465, https://www.webofscience.com/wos/woscc/full-record/WOS:000235330900009.

科研活动

   
科研项目
( 1 ) 膀胱尿路微生物组组成及功能变化与膀胱癌相关性的研究, 主持, 国家级, 2016-01--2019-12
( 2 ) 治疗耐药菌感染的噬菌体制剂的研究, 主持, 省级, 2016-06--2019-06
( 3 ) 近海水产养殖关键技术研发, 主持, 省级, 2016-06--2018-06
( 4 ) 近海海水污染物降解相关可移动遗传元件的研究, 主持, 省级, 2016-06--2018-06
( 5 ) 人工噬藻体的设计、合成与拯救, 主持, 国家级, 2019-07--2024-07
参与会议
(1)Bacteriophage Research   纪念噬菌体发现100周年学术会议   2017-04-24
(2)bacteriophage research   2016年噬菌体在医药、食品和生物技术应用国际会议   2016-09-07