基本信息
王明山  男  博导  中国科学院昆明动物研究所
电子邮件: wangmingshan@mail.kiz.ac.cn
通信地址: 云南省昆明市盘龙区龙欣路17号
邮政编码:

招生信息

   
招生专业
071007-遗传学
招生方向
进化基因组学
群体遗传学

教育背景

2011-09--2017-01   中科院昆明动物研究所   博士学位
2007-09--2011-07   吉林大学   农学学士学位

工作经历

   
工作简历
2022-05~现在, 中科院昆明动物研究所, 研究员
2019-02~现在, 霍华德休斯医学研究所,加州大学圣克鲁兹分校, 博士后
2017-01~2019-01,中科院昆明动物研究所, 副研究员

专利与奖励

   
奖励信息
(1) 家养动物的起源与驯化, 一等奖, 省级, 2020
(2) 中科院百篇优秀博士学位论文, 院级, 2018
(3) 中国科学院院长特别奖, 院级, 2016

出版信息

   
发表论文
[1] Wang, MingShan, Thakur, Mukesh, Jhala, Yadvendradev, Wang, Sheng, Srinivas, Yellapu, Dai, ShanShan, Liu, ZhengXi, Cheng, HongMan, Green, Richard E, Koepfli, KlausPeter, Shapiro, Beth. Genome Sequencing of a Gray Wolf from Peninsular India Provides New Insights into the Evolution and Hybridization of Gray Wolves. GENOME BIOLOGY AND EVOLUTION[J]. 2022, 14(2): http://dx.doi.org/10.1093/gbe/evac012.
[2] Li, Ming, Sun, Congjiao, Xu, Naiyi, Bian, Peipei, Tian, Xiaomeng, Wang, Xihong, Wang, Yuzhe, Jia, Xinzheng, Heller, Rasmus, Wang, Mingshan, Wang, Fei, Dai, Xuelei, Luo, Rongsong, Guo, Yingwei, Wang, Xiangnan, Yang, Peng, Hu, Dexiang, Liu, Zhenyu, Fu, Weiwei, Zhang, Shunjin, Li, Xiaochang, Wen, Chaoliang, Lan, Fangren, Siddiki, Amam Zonaed, Suwannapoom, Chatmongkon, Zhao, Xin, Nie, Qinghua, Hu, Xiaoxiang, Jiang, Yu, Yang, Ning. De Novo Assembly of 20 Chicken Genomes Reveals the Undetectable Phenomenon for Thousands of Core Genes on Microchromosomes and Subtelomeric Regions. MOLECULAR BIOLOGY AND EVOLUTION[J]. 2022, 39(4): http://dx.doi.org/10.1093/molbev/msac066.
[3] Le Duc, Diana, Velluva, Akhil, CassattJohnstone, Molly, Olsen, RemiAndre, Baleka, Sina, Lin, ChenChing, Lemke, Johannes R, Southon, John R, Burdin, Alexander, Wang, MingShan, Grunewald, Sonja, Rosendahl, Wilfried, Joger, Ulrich, Rutschmann, Sereina, Hildebrandt, Thomas B, Fritsch, Guido, Estes, James A, Kelso, Janet, Dalen, Love, Hofreiter, Michael, Shapiro, Beth, Schoeneberg, Torsten. Genomic basis for skin phenotype and cold adaptation in the extinct Steller's sea cow. SCIENCE ADVANCES[J]. 2022, 8(5): http://dx.doi.org/10.1126/sciadv.abl6496.
[4] Wang, MingShan, Murray, Gemma G R, Mann, Daniel, Groves, Pamela, Vershinina, Alisa O, Supple, Megan A, Kapp, Joshua D, CorbettDetig, Russell, Crump, Sarah E, Stirling, Ian, Laidre, Kristin L, Kunz, Michael, Dalen, Love, Green, Richard E, Shapiro, Beth. A polar bear paleogenome reveals extensive ancient gene flow from polar bears into brown bears. NATURE ECOLOGY & EVOLUTION[J]. 2022, 6(7): 936-+, http://dx.doi.org/10.1038/s41559-022-01753-8.
[5] Guo, Xing, Xing, ChaoHui, Wei, Wei, Zhang, XueFang, Wei, ZhengYu, Ren, LeiLei, Jiang, JinJin, Li, Min, Wang, JiangXian, He, XinXin, Wang, MingShan, Jiang, RunShen. Genome-wide scan for selection signatures and genes related to heat tolerance in domestic chickens in the tropical and temperate regions in Asia. POULTRY SCIENCE[J]. 2022, 101(7): https://doaj.org/article/d7d0d581e25b49b88ad2745826858334.
[6] Wang, MingShan, Zhang, JinJin, Guo, Xing, Li, Ming, Meyer, Rachel, Ashari, Hidayat, Zheng, ZhuQing, Wang, Sheng, Peng, MinSheng, Jiang, Yu, Thakur, Mukesh, Suwannapoom, Chatmongkon, Esmailizadeh, Ali, Hirimuthugoda, Nalini Yasoda, Zein, Moch Syamsul Arifin, Kusza, Szilvia, KharratiKoopaee, Hamed, Zeng, Lin, Wang, YunMei, Yin, TingTing, Yang, MinMin, Li, MingLi, Lu, XueMei, Lasagna, Emiliano, Ceccobelli, Simone, Gunwardana, Humpita Gamaralalage Thilini Nisanka, Senasig, Thilina Madusanka, Feng, ShaoHong, Zhang, Hao, Bhuiyan, Abul Kashem Fazlul Haque, Khan, Muhammad Sajjad, Silva, Gamamada Liyanage Lalanie Pradeepa, Le Thi Thuy, Mwai, Okeyo A, Ibrahim, Mohamed Nawaz Mohamed, Zhang, Guojie, Qu, KaiXing, Hanotte, Olivier, Shapiro, Beth, Bosse, Mirte, Wu, DongDong, Han, JianLin, Zhang, YaPing. Large-scale genomic analysis reveals the genetic cost of chicken domestication. BMC BIOLOGY[J]. 2021, 19(1): http://dx.doi.org/10.1186/s12915-021-01052-x.
[7] Shen, QuanKuan, Peng, MinSheng, Adeola, Adeniyi C, Kui, Ling, Duan, Shengchang, Miao, YongWang, Eltayeb, Nada M, Lichoti, Jacqueline K, Otecko, Newton O, Strillacci, Maria Giuseppina, Gorla, Erica, Bagnato, Alessandro, Charles, Olaogun S, Sanke, Oscar J, Dawuda, Philip M, Okeyoyin, Agboola O, Musina, John, Njoroge, Peter, Agwanda, Bernard, Kusza, Szilvia, Nanaei, Hojjat Asadollahpour, Pedar, Rana, Xu, MingMin, Du, Yuan, Nneji, Lotanna M, Murphy, Robert W, Wang, MingShan, Esmailizadeh, Ali, Dong, Yang, Ommeh, Sheila C, Zhang, YaPing. Genomic Analyses of Unveil Helmeted Guinea Fowl (Numida meleagris) Domestication in West Africa. GENOMEBIOLOGYANDEVOLUTION[J]. 2021, 13(6): http://dx.doi.org/10.1093/gbe/evab090.
[8] Zhang, Linqiang, Zhang, Zhiguo, Li, Chengbin, Zhu, Tingting, Gao, Jing, Zhou, Hu, Zheng, Yingzhuan, Chang, Qing, Wang, Mingshan, Wu, Jieyu, Ran, Liyuan, Wu, Yingjie, Miao, Huilai, Zou, Xiaoju, Liang, Bin. S100A11 Promotes Liver Steatosis via FOXO1-Mediated Autophagy and Lipogenesis. CELLULAR AND MOLECULAR GASTROENTEROLOGY AND HEPATOLOGY[J]. 2021, 11(3): 697-724, http://dx.doi.org/10.1016/j.jcmgh.2020.10.006.
[9] Liang, Suyun, Wang, MingShan, Zhang, Bo, Feng, Yulong, Tang, Jing, Xie, Ming, Huang, Wei, Zhang, Qi, Zhang, Dabing, Hou, Shuisheng. NOD1 Is Associated With the Susceptibility of Pekin Duck Flock to Duck Hepatitis A Virus Genotype 3. FRONTIERS IN IMMUNOLOGY[J]. 2021, 12: http://dx.doi.org/10.3389/fimmu.2021.766740.
[10] Guo, Xing, He, XinXin, Chen, Hong, Wang, ZhiCheng, Li, HuiFang, Wang, JiangXian, Wang, MingShan, Jiang, RunShen. Revisiting the evolutionary history of domestic and wild ducks based on genomic analyses. ZOOLOGICAL RESEARCH[J]. 2021, 42(1): 43-50, https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7840458/.
[11] Zeng, Lin, Liu, HeQun, Tu, XiaoLong, Ji, ChangMian, Gou, Xiao, Esmailizadeh, Ali, Wang, Sheng, Wang, MingShan, Wang, MingCheng, Li, XiaoLong, Charati, Hadi, Adeola, Adeniyi C, Adedokun, Rahamon Akinyele Moshood, Oladipo, Olatunbosun, Olaogun, Sunday Charles, Sanke, Oscar J, Godwin, Mangbon F, Ommeh, Sheila Cecily, Agwanda, Bernard, Lichoti, Jacqueline Kasiiti, Han, JianLin, Zheng, HongKun, Wang, ChangFa, Zhang, YaPing, Frantz, Laurent A F, Wu, DongDong. Genomes reveal selective sweeps in kiang and donkey for high-altitude adaptation. ZOOLOGICAL RESEARCH[J]. 2021, 42(4): 450-+, http://sciencechina.cn/gw.jsp?action=detail.jsp&internal_id=7032266&detailType=1.
[12] MingShan Wang, Mukesh Thakur, MinSheng Peng, Yu Jiang, Laurent Alain Franois Frantz, Ming Li, JinJin Zhang, Sheng Wang, Joris Peters, Newton Otieno Otecko, Chatmongkon Suwannapoom, Xing Guo, ZhuQing Zheng, Ali Esmailizadeh, Nalini Yasoda Hirimuthugoda, Hidayat Ashari, Sri Suladari, Moch Syamsul Arifin Zein, Szilvia Kusza, Saeed Sohrabi, Hamed KharratiKoopaee, QuanKuan Shen, Lin Zeng, MinMin Yang, YaJiang Wu, XingYan Yang, XueMei Lu, XinZheng Jia, QingHua Nie, Susan Joy Lamont, Emiliano Lasagna, Simone Ceccobelli, Humpita Gamaralalage Thilini Nisanka Gunwardana, Thilina Madusanka Senasige, ShaoHong Feng, JingFang Si, Hao Zhang, JieQiong Jin, MingLi Li, YanHu Liu, HongMan Chen, Cheng Ma, ShanShan Dai, Abul Kashem Fazlul Haque Bhuiyan, Muhammad Sajjad Khan, Gamamada Liyanage Lalanie Pradeepa Silva, ThiThuy Le, Okeyo Ally Mwai, Mohamed Nawaz Mohamed Ibrahim, Megan Supple, Beth Shapiro, Olivier Hanotte, Guojie Zhang, Greger Larson, JianLin Han, DongDong Wu, YaPing Zhang. Author Correction: 863 genomes reveal the origin and domestication of chicken. CELL RESEARCH[J]. 2020, 30(9): 824-825, http://lib.cqvip.com/Qikan/Article/Detail?id=7103057047.
[13] Wang, MingShan, Wang, Sheng, Li, Yan, Jhala, Yadvendradev, Thakur, Mukesh, Otecko, Newton O, Si, JingFang, Chen, HongMan, Shapiro, Beth, Nielsen, Rasmus, Zhang, YaPing, Wu, DongDong. Ancient Hybridization with an Unknown Population Facilitated High-Altitude Adaptation of Canids. MOLECULAR BIOLOGY AND EVOLUTION[J]. 2020, 37(9): 2616-2629, http://dx.doi.org/10.1093/molbev/msaa113.
[14] Ming-Li Li, Hui Tang, Yong Shao, Ming-Shan Wang, Hai-Bo Xu, Sheng Wang, David M Irwin, Adeniyi C Adeola, Tao Zeng, Luonan Chen, Yan Li, Dong-Dong Wu. Evolution and transition of expression trajectory during human brain development. BMC EVOLUTIONARY BIOLOGY[J]. 2020, 20: http://dx.doi.org/10.1186/s12862-020-01633-4.
[15] Wang, MingShan, Thakur, Mukesh, Peng, MinSheng, Jiang, Yu, Frantz, Laurent Alain Francois, Li, Ming, Zhang, JinJin, Wang, Sheng, Peters, Joris, Otecko, Newton Otieno, Suwannapoom, Chatmongkon, Guo, Xing, Zheng, ZhuQing, Esmailizadeh, Ali, Hirimuthugoda, Nalini Yasoda, Ashari, Hidayat, Suladari, Sri, Zein, Moch Syamsul Arifin, Kusza, Szilvia, Sohrabi, Saeed, KharratiKoopaee, Hamed, Shen, QuanKuan, Zeng, Lin, Yang, MinMin, Wu, YaJiang, Yang, XingYan, Lu, XueMei, Jia, XinZheng, Nie, QingHua, Lamont, Susan Joy, Lasagna, Emiliano, Ceccobelli, Simone, Gunwardana, Humpita Gamaralalage Thilini Nisanka, Senasige, Thilina Madusanka, Feng, ShaoHong, Si, JingFang, Zhang, Hao, Jin, JieQiong, Li, MingLi, Liu, YanHu, Chen, HongMan, Ma, Cheng, Dai, ShanShan, Bhuiyan, Abul Kashem Fazlul Haque, Khan, Muhammad Sajjad, Silva, Gamamada Liyanage Lalanie Pradeepa, ThiThuy Le, Mwai, Okeyo Ally, Ibrahim, Mohamed Nawaz Mohamed, Supple, Megan, Shapiro, Beth, Hanotte, Olivier, Zhang, Guojie, Larson, Greger, Han, JianLin, Wu, DongDong, Zhang, YaPing. 863 genomes reveal the origin and domestication of chicken. CELL RESEARCH[J]. 2020, 30(8): 693-701, http://lib.cqvip.com/Qikan/Article/Detail?id=7102918059.
[16] DongDong Wu, CuiPing Yang, MingShan Wang, KunZhe Dong, DaWei Yan, ZiQian Hao, SongQing Fan, ShuZhou Chu, QiuShuo Shen, LiPing Jiang, Yan Li, Lin Zeng, HeQun Liu, HaiBing Xie, YunFei Ma, XiaoYan Kong, ShuLi Yang, XinXing Dong, Ali Esmailizadeh, David M Irwin, Xiao Xiao, Ming Li, Yang Dong, Wen Wang, Peng Shi, HaiPeng Li, YueHui Ma, Xiao Gou, YongBin Chen, YaPing Zhang. Convergent genomic signatures of high-altitude adaptation among domestic mammals. 国家科学评论:英文版[J]. 2020, 7(6): 952-963, http://lib.cqvip.com/Qikan/Article/Detail?id=7102365791.
[17] Zeng, Lin, Tu, XiaoLong, Dai, He, Han, FengMing, Lu, BingShe, Wang, MingShan, Nanaei, Hojjat Asadollahpour, Tajabadipour, Ali, Mansouri, Mehdi, Li, XiaoLong, Ji, LiLi, Irwin, David M, Zhou, Hong, Liu, Min, Zheng, HongKun, Esmailizadeh, Ali, Wu, DongDong. Whole genomes and transcriptomes reveal adaptation and domestication of pistachio. GENOME BIOLOGY[J]. 2019, 20(1): https://doaj.org/article/459449d672e241a884613e191ab17c1c.
[18] Zeng, Lin, Ming, Chen, Li, Yan, Su, LingYan, Su, YanHua, Otecko, Newton O, Dalecky, Ambroise, Donnellan, Stephen, Aplin, Ken, Liu, XiaoHui, Song, Ying, Zhang, ZhiBin, Esmailizadeh, Ali, Sohrabi, Saeed S, Nanaei, Hojjat Asadollahpour, Liu, HeQun, Wang, MingShan, Atteynine, Solimane Ag, Rocamora, Gerard, Brescia, Fabrice, Morand, Serge, Irwin, David M, Peng, MingSheng, Yao, YongGang, Li, HaiPeng, Wu, DongDong, Zhang, YaPing. Out of Southern East Asia of the Brown Rat Revealed by Large-Scale Genome Sequencing. MOLECULAR BIOLOGY AND EVOLUTION[J]. 2018, 35(1): 149-158, http://159.226.149.26:8080/handle/152453/12385.
[19] Guo, Xing, Li, YanQing, Wang, MingShan, Wang, ZhiBin, Zhang, Quan, Shao, Yong, Jiang, RunShen, Wang, Sheng, Ma, ChenDong, Murphy, Robert W, Wang, GuangQin, Dong, Jing, Zhang, Li, Wu, DongDong, Du, BingWang, Peng, MinSheng, Zhang, YaPing. A parallel mechanism underlying frizzle in domestic chickens. JOURNAL OF MOLECULAR CELL BIOLOGY[J]. 2018, 10(6): 589-591, https://www.webofscience.com/wos/woscc/full-record/WOS:000455316500011.
[20] Wu, DongDong, Ding, XiangDong, Wang, Sheng, Wojcik, Jan M, Zhang, Yi, Tokarska, Malgorzata, Li, Yan, Wang, MingShan, Faruque, Omar, Nielsen, Rasmus, Zhang, Qin, Zhang, YaPing. Pervasive introgression facilitated domestication and adaptation in the Bos species complex. NATURE ECOLOGY & EVOLUTION[J]. 2018, 2(7): 1139-+, http://159.226.149.26:8080/handle/152453/12353.
[21] Wang, MingShan, Otecko, Newton O, Wang, Sheng, Wu, DongDong, Yang, MinMin, Xu, YiLong, Murphy, Robert W, Peng, MinSheng, Zhang, YaPing. An Evolutionary Genomic Perspective on the Breeding of Dwarf Chickens. MOLECULAR BIOLOGY AND EVOLUTION[J]. 2017, 34(12): 3081-3088, http://dx.doi.org/10.1093/molbev/msx227.
[22] Li, Yan, Wang, MingShan, Otecko, Newton O, Wang, Wen, Shi, Peng, Wu, DongDong, Zhang, YaPing. Hypoxia potentially promotes Tibetan longevity. CELL RESEARCH[J]. 2017, 27(2): 302-305, [23] Wang, MingShan, Zeng, Yan, Wang, Xiao, Nie, WenHui, Wang, JinHuan, Su, WeiTing, Otecko, Newton O, Xiong, ZiJun, Wang, Sheng, Qu, KaiXing, Yan, ShouQing, Yang, MinMin, Wang, Wen, Dong, Yang, Wu, DongDong, Zhang, YaPing. Draft genome of the gayal, Bos frontalis. GIGASCIENCE[J]. 2017, 6(11): http://159.226.149.26:8080/handle/152453/12087.
[24] YunMei Wang, HaiBo Xu, MingShan Wang, Newton Otieno Otecko, LingQun Ye, DongDong Wu, YaPing Zhang. Annotating long intergenic non-coding RNAs under artificial selection during chicken domestication. BMC EVOLUTIONARY BIOLOGY[J]. 2017, 17(1): http://159.226.149.26:8080/handle/152453/12023.
[25] Hirimuthugoda, Nalini Yasoda, Adeola, Adeniyi C, Perera, Patthamesthrige Wimal Anthony, Chen, Xing, Gunawardena, Weligalle Wedarallage Dewar Asoka, Gunawardana, Humpita Gamaralalage Thilini Nisanka, Yin, TingTing, Wang, MingShan, Li, GuiMei, Ding, ZhaoLi, Wang, WenZhi, Xie, HaiBing, Peng, MinSheng, Zhang, YaPing. Sri Lankan pig ancestry revealed by mitochondrial DNA, Y-chromosome, and MC1R. ANIMAL GENETICS. 2017, 48(5): 622-623, http://159.226.149.26:8080/handle/152453/12007.
[26] Wang, MingShan, Yang, HeChuan, Otecko, Newton O, Wu, DongDong, Zhang, YaPing. Olfactory genes in Tibetan wild boar. NATURE GENETICS. 2016, 48(9): 972-973, [27] Wang, MingShan, Huo, YongXia, Li, Yan, Otecko, Newton O, Su, LingYan, Xu, HaiBo, Wu, ShiFang, Peng, MinSheng, Liu, HeQun, Zeng, Lin, Irwin, David M, Yao, YongGang, Wu, DongDong, Zhang, YaPing. Comparative population genomics reveals genetic basis underlying body size of domestic chickens. JOURNAL OF MOLECULAR CELL BIOLOGY[J]. 2016, 8(6): 542-552, http://dx.doi.org/10.1093/jmcb/mjw044.
[28] Wang, MingShan, Li, Yan, Peng, MinSheng, Zhong, Li, Wang, ZongJi, Li, QiYe, Tu, XiaoLong, Dong, Yang, Zhu, ChunLing, Wang, Lu, Yang, MinMin, Wu, ShiFang, Miao, YongWang, Liu, JianPing, Irwin, David M, Wang, Wen, Wu, DongDong, Zhang, YaPing. Genomic Analyses Reveal Potential Independent Adaptation to High Altitude in Tibetan Chickens. MOLECULAR BIOLOGY AND EVOLUTION[J]. 2015, 32(7): 1880-1889, https://www.webofscience.com/wos/woscc/full-record/WOS:000360585900017.
[29] Liu, HeQun, Wei, JingKuan, Li, Bo, Wang, MingShan, Wu, RuiQi, Rizak, Joshua D, Zhong, Li, Wang, Lu, Xu, FuQiang, Shen, YongYi, Hu, XinTian, Zhang, YaPing. Divergence of dim-light vision among bats (order: Chiroptera) as estimated by molecular and electrophysiological methods. SCIENTIFIC REPORTS[J]. 2015, 5(X): http://ir.wipm.ac.cn/handle/112942/4852.
[30] Li, Yan, Wang, GuoDong, Wang, MingShan, Irwin, David M, Wu, DongDong, Zhang, YaPing. Domestication of the Dog from the Wolf Was Promoted by Enhanced Excitatory Synaptic Plasticity: A Hypothesis. GENOME BIOLOGY AND EVOLUTION[J]. 2014, 6(11): 3115-3121, http://dx.doi.org/10.1093/gbe/evu245.
[31] YunMei Wang, Saber Khederzadeh, ShiRong Li, Newton Otieno Otecko, David M Irwin, Mukesh Thakur, XiaoDie Ren, MingShan Wang, DongDong Wu, YaPing Zhang. Integrating Genomic and Transcriptomic Data to Reveal Genetic Mechanisms Underlying Piao Chicken Rumpless Trait. GENOMICS, PROTEOMICS & BIOINFORMATICS. http://dx.doi.org/10.1016/j.gpb.2020.06.019.

科研活动

   
科研项目
( 1 ) 新学科组启动经费, 负责人, 研究所自选, 2022-05--2026-05
参与会议
(1)Genomic analysis reveals the demographic history and genetic cost of chicken domestication   第二届亚洲演化生物学大学   2021-08-17
(2)基因组视角下的家鸡的起源与驯化研究   农业动物前沿论坛讲座第十期   2020-07-18