基本信息
焦远年  男  博导  中国科学院植物研究所
电子邮件: jiaoyn@ibcas.ac.cn
通信地址: 中国科学院植物研究所景天楼340室
邮政编码: 100093

研究领域

植物学

基因组学

生物信息学

进化生物学

招生信息

本课题组招收硕士、博士研究生

招生专业
071001-植物学
0710J3-生物信息学
0710Z1-基因组学
招生方向
植物基因组进化
植物多倍化研究
生物信息学

教育背景

2006-08--2011-07   美国宾夕法尼亚州立大学   博士学位
2000-09--2004-06   中国农业大学   学士学位

工作经历

   
工作简历
2015-10~现在, 中国科学院植物研究所, 研究员
2014-06~2015-09,St.jude Children's Research Hospital, 生物信息学研究人员(Scientist)
2012-09~2014-05,美国佐治亚大学, 博士后
2011-08~2012-08,美国宾夕法尼亚州立大学, 博士后
2004-07~2006-06,中国农业大学, 生物信息学实验室助理

教授课程

Perl编程与生物信息学应用

出版信息

   
发表论文
[1] Liping Shen, Yangyang Liu, Lili Zhang, Zhiwen Sun, Ziying Wang, Yuannian Jiao, Kuocheng Shen, Zifeng Guo. A transcriptional atlas identifies key regulators and networks for the development of spike tissues in barley. CELL REPORTS[J]. 2023, 42(11): 113441-, http://dx.doi.org/10.1016/j.celrep.2023.113441.
[2] Runxian Yu, Xudong Chen, Lingjie Long, Matthias Jost, Ran Zhao, Lumei Liu, Jeffrey P Mower, Claude W dePamphilis, Stefan Wanke, Yuannian Jiao. De novo Assembly and Comparative Analyses of Mitochondrial Genomes in Piperales. GENOME BIOLOGY AND EVOLUTION[J]. 2023, 15(3): https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10036691/.
[3] Chen, Yongming, Guo, Yiwen, Xie, Xiaoming, Wang, Zihao, Miao, Lingfeng, Yang, Zhengzhao, Jiao, Yuannian, Xie, Chaojie, Liu, Jie, Hu, Zhaorong, Xin, Mingming, Yao, Yingyin, Ni, Zhongfu, Sun, Qixin, Peng, Huiru, Guo, Weilong. Pangenome-based trajectories of intracellular gene transfers in Poaceae unveil high cumulation in Triticeae. PLANT PHYSIOLOGY. 2023, http://dx.doi.org/10.1093/plphys/kiad319.
[4] Zhongqiu Li, Yiheng Hu, Xuelian Ma, Lingling Da, Jiajie She, Yue Liu, Xin Yi, Yaxin Cao, Wenying Xu, Yuannian Jiao, Zhen Su. WheatCENet: A Database for Comparative Co-expression Networks Analysis of Allohexaploid Wheat and Its Progenitors. GENOMICS, PROTEOMICS & BIOINFORMATICS. 2023, 21(2): 324-336, http://dx.doi.org/10.1016/j.gpb.2022.04.007.
[5] Xiaoliang Wang, Xuxu Ma, Ge Yan, Lei Hua, Han Liu, Wei Huang, Zhikai Liang, Qing Chao, Julian M Hibberd, Yuannian Jiao, Mei Zhang. Gene duplications facilitate C4-CAM compatibility in common purslane. Plant Physiology[J]. 2023, 193(4): 2622-2639, [6] Hongyu Chen, Miaoxian Guo, Shuting Dong, Xinling Wu, Guobin Zhang, Liu He, Yuannian Jiao, Shilin Chen, Li Li, Hongmei Luo. A chromosome-scale genome assembly of Artemisia argyi reveals unbiased subgenome evolution and key contributions of gene duplication to volatile terpenoid diversity. PLANT COMMUNICATIONS. 2023, 4(3): https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10203441/.
[7] Kunpeng Li, Peng Xu, Jinpeng Wang, Xin Yi, Yuannian Jiao. Identification of errors in draft genome assemblies at single-nucleotide resolution for quality assessment and improvement. NATURE COMMUNICATIONS[J]. 2023, 14(1): 1-12, http://dx.doi.org/10.1038/s41467-023-42336-w.
[8] Lingfei Li, Xiaoli Chen, Dongming Fang, Shanshan Dong, Xing Guo, Na Li, Lucia CamposDominguez, Wenguang Wang, Yang Liu, Xiaoan Lang, Yang Peng, Daike Tian, Daniel C Thomas, Weixue Mu, Min Liu, Chenyu Wu, Ting Yang, Suzhou Zhang, Leilei Yang, Jianfen Yang, ZhongJian Liu, Liangsheng Zhang, Xingtan Zhang, Fei Chen, Yuannian Jiao, Yalong Guo, Mark Hughes, Wei Wang, Xiaofei Liu, Chunmei Zhong, Airong Li, Sunil Kumar Sahu, Huanming Yang, Ernest Wu, Joel Sharbrough, Michael Lisby, Xin Liu, Xun Xu, Douglas E Soltis, Yves Van de Peer, Catherine Kidner, Shouzhou Zhang, Huan Liu. Genomes shed light on the evolution of Begonia , a mega-diverse genus. THE NEW PHYTOLOGIST[J]. 2022, 234(1): 295-310, https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7612470/.
[9] Li, Hao, Nie, Fang, Zhu, Lele, Mu, Menghua, Fan, Ruixiao, Li, Jingyao, Shaheen, Aaqib, Liu, Yifan, Li, Can, Liu, Wenjuan, Liang, Huihui, Zhao, Xinpeng, Bai, Shenglong, Guo, Guanghui, Li, Zheng, Hu, Yiheng, Jiao, Yuannian, Adams, Jonathan, Distelfeld, Assaf, Sun, Guiling, Li, Suoping, Zhou, Yun, Song, ChunPeng. New insights into the dispersion history and adaptive evolution of taxon Aegilops tauschii in China. JOURNAL OF GENETICS AND GENOMICS[J]. 2022, 49(3): 185-194, http://dx.doi.org/10.1016/j.jgg.2021.11.004.
[10] Li, Lingfei, Chen, Xiaoli, Fang, Dongming, Dong, Shanshan, Guo, Xing, Li, Na, CamposDominguez, Lucia, Wang, Wenguang, Liu, Yang, Lang, Xiaoan, Peng, Yang, Tian, Daike, Thomas, Daniel C, Mu, Weixue, Liu, Min, Wu, Chenyu, Yang, Ting, Zhang, Suzhou, Yang, Leilei, Yang, Jianfen, Liu, ZhongJian, Zhang, Liangsheng, Zhang, Xingtan, Chen, Fei, Jiao, Yuannian, Guo, Yalong, Hughes, Mark, Wang, Wei, Liu, Xiaofei, Zhong, Chunmei, Li, Airong, Sahu, Sunil Kumar, Yang, Huanming, Wu, Ernest, Sharbrough, Joel, Lisby, Michael, Liu, Xin, Xu, Xun, Soltis, Douglas E, Van de Peer, Yves, Kidner, Catherine, Zhang, Shouzhou, Liu, Huan. Genomes shed light on the evolution of Begonia, a mega-diverse genus. NEW PHYTOLOGIST[J]. 2022, 234(1): 295-310, http://dx.doi.org/10.1111/nph.17949.
[11] Shen, Yanting, Li, Wanying, Zeng, Ying, Li, Zhipeng, Chen, Yiqiong, Zhang, Jixiang, Zhao, Hong, Feng, Lingfang, Ma, Dongming, Mo, Xiaolu, Ouyang, Puyue, Huang, Lili, Wang, Zheng, Jiao, Yuannian, Wang, Hongbin. Chromosome-level and haplotype-resolved genome provides insight into the tetraploid hybrid origin of patchouli. NATURE COMMUNICATIONS[J]. 2022, 13(1): https://doaj.org/article/39c8e259303a49c7b9a0b64430a4c3d9.
[12] Wang, Xiaoliang, Yan, Xueqing, Hu, Yiheng, Qin, Liuyu, Wang, Daowen, Jia, Jizeng, Jiao, Yuannian. A recent burst of gene duplications in Triticeae. PLANT COMMUNICATIONS[J]. 2022, 3(2): 1-12, http://apps.webofknowledge.com/CitedFullRecord.do?product=UA&colName=WOS&SID=5CCFccWmJJRAuMzNPjj&search_mode=CitedFullRecord&isickref=WOS:000800127600008.
[13] Wen, Xiaohui, Li, Junzhuo, Wang, Lili, Lu, Chenfei, Gao, Qiang, Xu, Peng, Pu, Ya, Zhang, Qiuling, Hong, Yan, Hong, Luo, Huang, He, Xin, Huaigen, Wu, Xiaoyun, Kang, Dongru, Gao, Kang, Li, Yajun, Ma, Chaofeng, Li, Xuming, Zheng, Hongkun, Wang, Zicheng, Jiao, Yuannian, Zhang, Liangsheng, Dai, Silan. The chrysanthemum lavandulifolium genome and the molecular mechanism underlying diverse capitulum types. HORTICULTURE RESEARCH[J]. 2022, 9(1): http://dx.doi.org/10.1093/hr/uhab022.
[14] Lu, Jiangjie, Luo, Meifang, Wang, Li, Li, Kunpeng, Yu, Yongyi, Yang, Weifei, Gong, Pichang, Gao, Huihui, Li, Qiaoru, Zhao, Jing, Wu, Lanfeng, Zhang, Mingshu, Liu, Xueyang, Zhang, Xuemei, Zhang, Xian, Kang, Jieyu, Yu, Tongyuan, Li, Zhimin, Jiao, Yuannian, Wang, Huizhong, He, Chaoying. The Physalis floridana genome provides insights into the biochemical and morphological evolution of Physalis fruits. HORTICULTURE RESEARCH[J]. 2021, 8(1): http://dx.doi.org/10.1038/s41438-021-00705-w.
[15] Liuyu Qin, Yiheng Hu, Jinpeng Wang, Xiaoliang Wang, Ran Zhao, Hongyan Shan, Kunpeng Li, Peng Xu, Hanying Wu, Xueqing Yan, Lumei Liu, Xin Yi, Stefan Wanke, John E Bowers, James H LeebensMack, Claude W dePamphilis, Pamela S Soltis, Douglas E Soltis, Hongzhi Kong, Yuannian Jiao. Insights into angiosperm evolution, floral development and chemical biosynthesis from the Aristolochia fimbriata genome. NATURE PLANTS[J]. 2021, 7(9): 1239-1253, [16] Jinghe Xie, Haifeng Zhao, Kunpeng Li, Rui Zhang, Yongchao Jiang, Meimei Wang, Xuelian Guo, Ben Yu, Hongzhi Kong, Yuannian Jiao, Guixia Xu. A chromosome-scale reference genome of Aquilegia oxysepala var. kansuensis. HORTICULTURE RESEARCH[J]. 2020, 7(1): 1413-1425, http://dx.doi.org/10.1038/s41438-020-0328-y.
[17] Zhang, Liangsheng, Chen, Fei, Zhang, Xingtan, Li, Zhen, Zhao, Yiyong, Lohaus, Rolf, Chang, Xiaojun, Dong, Wei, Ho, Simon Y W, Liu, Xing, Song, Aixia, Chen, Junhao, Guo, Wenlei, Wang, Zhengjia, Zhuang, Yingyu, Wang, Haifeng, Chen, Xuequn, Hu, Juan, Liu, Yanhui, Qin, Yuan, Wang, Kai, Dong, Shanshan, Liu, Yang, Zhang, Shouzhou, Yu, Xianxian, Wu, Qian, Wang, Liangsheng, Yan, Xueqing, Jiao, Yuannian, Kong, Hongzhi, Zhou, Xiaofan, Yu, Cuiwei, Chen, Yuchu, Li, Fan, Wang, Jihua, Chen, Wei, Chen, Xinlu, Jia, Qidong, Zhang, Chi, Jiang, Yifan, Zhang, Wanbo, Liu, Guanhua, Fu, Jianyu, Chen, Feng, Ma, Hong, Van de Peer, Yves, Tang, Haibao. The water lily genome and the early evolution of flowering plants. NATURE[J]. 2020, 577(7788): 79-+, http://dx.doi.org/10.1038/s41586-019-1852-5.
[18] Ali, Roshan, Jiao, Yuannian, Wall, P Kerr, Patching, Simon G, Ahmad, Irshad, Lutfulla, Ghosia, dePamphilis, Claude W. In silico identification and structure function analysis of a putative coclaurine N-methyltransferase from Aristolochia fimbriata. COMPUTATIONAL BIOLOGY AND CHEMISTRY[J]. 2020, 85: http://dx.doi.org/10.1016/j.compbiolchem.2020.107201.
[19] Zhang, Jian, Fu, XinXing, Li, RuiQi, Zhao, Xiang, Liu, Yang, Li, MingHe, Zwaenepoel, Arthur, Ma, Hong, Goffinet, Bernard, Guan, YanLong, Xue, JiaYu, Liao, YiYing, Wang, QingFeng, Wang, QingHua, Wang, JieYu, Zhang, Guo Qiang, Wang, ZhiWen, Jia, Yu, Wang, MeiZhi, Dong, ShanShan, Yang, JianFen, Jiao, YuanNian, Guo, YaLong, Kong, HongZhi, Lu, AnMing, Yang, HuanMing, Zhang, ShouZhou, Van de Peer, Yves, Liu, ZhongJian, Chen, ZhiDuan. The hornwort genome and early land plant evolution. NATURE PLANTS[J]. 2020, 6(2): 107-118, https://www.webofscience.com/wos/woscc/full-record/WOS:000512529000001.
[20] Zhang, Liangsheng, Wu, Shengdan, Chang, Xiaojun, Wang, Xiuyun, Zhao, Yunpeng, Xia, Yiping, Trigiano, Robert N, Jiao, Yuannian, Chen, Fei. The ancient wave of polyploidization events in flowering plants and their facilitated adaptation to environmental stress. PLANT CELL AND ENVIRONMENT[J]. 2020, 43(12): 2847-2856, http://dx.doi.org/10.1111/pce.13898.
[21] Wu, Shengdan, Han, Baocai, Jiao, Yuannian. Genetic Contribution of Paleopolyploidy to Adaptive Evolution in Angiosperms. MOLECULAR PLANT[J]. 2020, 13(1): 59-71, http://lib.cqvip.com/Qikan/Article/Detail?id=7101218365.
[22] Chen, Yongming, Song, Wanjun, Xie, Xiaoming, Wang, Zihao, Guan, Panfeng, Peng, Huiru, Jiao, Yuannian, Ni, Zhongfu, Sun, Qixin, Guo, Weilong. A Collinearity-Incorporating Homology Inference Strategy for Connecting Emerging Assemblies in the Triticeae Tribe as a Pilot Practice in the Plant Pangenomic Era. MOLECULAR PLANT[J]. 2020, 13(12): 1694-1708, http://dx.doi.org/10.1016/j.molp.2020.09.019.
[23] Zhang, Xiaoxia, Li, Xiaoxia, Zhao, Ran, Zhou, Yun, Jiao, Yuannian. Evolutionary strategies drive a balance of the interacting gene products for the CBL and CIPK gene families. NEW PHYTOLOGIST[J]. 2020, 226(5): 1506-1516, http://dx.doi.org/10.1111/nph.16445.
[24] Liu, Jin, Shi, Cong, Shi, ChengCheng, Li, Wei, Zhang, QunJie, Zhang, Yun, Li, Kui, Lu, HuiFang, Shi, Chao, Zhu, SiTao, Xiao, ZaiYun, Nan, Hong, Yue, Yao, Zhu, XunGe, Wu, Yu, Hong, XiaoNing, Fan, GuangYi, Tong, Yan, Zhang, Dan, Mao, ChangLi, Liu, YunLong, Hao, ShiJie, Liu, WeiQing, Lv, MeiQi, Zhang, HaiBin, Liu, Yuan, Hutang, GeRan, Wang, JinPeng, Wang, JiaHao, Sun, YingHuai, Ni, ShuBang, Chen, WenBin, Zhang, XingCai, Jiao, YuanNian, Eichler, Evan E, Li, GuoHua, Liu, Xin, Gao, LiZhi. The Chromosome-Based Rubber Tree Genome Provides New Insights into Spurge Genome Evolution and Rubber Biosynthesis. MOLECULAR PLANT[J]. 2020, 13(2): 336-350, http://lib.cqvip.com/Qikan/Article/Detail?id=7101522865.
[25] Liu, PingLi, Zhang, Xi, Mao, JianFeng, Hong, YanMing, Zhang, RenGang, Yilan, E, Nie, Shuai, Jia, Kaihua, Jiang, ChenKun, He, Jian, Shen, Weiwei, He, Qizouhong, Zheng, Wenqing, Abbas, Samar, Jewaria, Pawan Kumar, Tian, Xuechan, Liu, Changjun, Jiang, Xiaomei, Yin, Yafang, Liu, Bo, Wang, Li, Jin, Biao, Ma, Yongpeng, Qiu, Zongbo, Baluska, Frantisek, Samaj, Jozef, He, Xinqiang, Niu, Shihui, Xie, Jianbo, Xie, Lei, Xu, Huimin, Kong, Hongzhi, Ge, Song, Dixon, Richard A, Jiao, Yuannian, Lin, Jinxing. The Tetracentron genome provides insight into the early evolution of eudicots and the formation of vessel elements. GENOME BIOLOGY[J]. 2020, 21(1): https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7709256/.
[26] Guo, Hui, Jiao, Yuannian, Tan, Xu, Wang, Xiyin, Huang, Xianzhong, Jin, Huizhe, Paterson, Andrew H. Gene duplication and genetic innovation in cereal genomes. GENOME RESEARCH[J]. 2019, 29(2): 261-269, [27] Yoshida, Satoko, Kim, Seungill, Wafula, Eric K, Tanskanen, Jaakko, Kim, YongMin, Honaas, Loren, Yang, Zhenzhen, Spallek, Thomas, Conn, Caitlin E, Ichihashi, Yasunori, Cheong, Kyeongchae, Cui, Songkui, Der, Joshua P, Gundlach, Heidrun, Jiao, Yuannian, Hori, Chiaki, Ishida, Juliane K, Kasahara, Hiroyuki, Kiba, Takatoshi, Kim, MyungShin, Koo, Namjin, Laohavisit, Anuphon, Lee, YongHwan, Lumba, Shelley, McCourt, Peter, Mortimer, Jenny C, Mutuku, J Musembi, Nomura, Takahito, SasakiSekimoto, Yuko, Seto, Yoshiya, Wang, Yu, Wakatake, Takanori, Sakakibara, Hitoshi, Demura, Taku, Yamaguchi, Shinjiro, Yoneyama, Koichi, Manabe, Riichiroh, Nelson, David C, Schulman, Alan H, Timko, Michael P, DePamphilis, Claude W, Choi, Doil, Shirasu, Ken. Genome Sequence of Striga asiatica Provides Insight into the Evolution of Plant Parasitism. CURRENT BIOLOGY[J]. 2019, 29(18): 3041-+, http://dx.doi.org/10.1016/j.cub.2019.07.086.
[28] Jiao, Yuannian. Double the Genome, Double the Fun: Genome Duplications in Angiosperms. MOLECULAR PLANT[J]. 2018, 11(3): 357-358, http://lib.cqvip.com/Qikan/Article/Detail?id=675020420.
[29] Rusch, Michael, Nakitandwe, Joy, Shurtleff, Sheila, Newman, Scott, Zhang, Zhaojie, Edmonson, Michael N, Parker, Matthew, Jiao, Yuannian, Ma, Xiaotu, Liu, Yanling, Gu, Jiali, Walsh, Michael F, Becksfort, Jared, Thrasher, Andrew, Li, Yongjin, McMurry, James, Hedlund, Erin, Patel, Aman, Easton, John, Yergeau, Donald, Vadodaria, Bhavin, Tatevossian, Ruth G, Raimondi, Susana, Hedges, Dale, Chen, Xiang, Hagiwara, Kohei, McGee, Rose, Robinson, Giles W, Klco, Jeffery M, Gruber, Tanja A, Ellison, David W, Downing, James R, Zhang, Jinghui. Clinical cancer genomic profiling by three-platform sequencing of whole genome, whole exome and transcriptome. NATURE COMMUNICATIONS[J]. 2018, 9(1): http://dx.doi.org/10.1038/s41467-018-06485-7.
[30] Yiheng Hu, Ran Zhao, Peng Xu, Yuannian Jiao. The Genome of Opium Poppy Reveals Evolutionary History of Morphinan Pathway. 基因组蛋白质组与生物信息学报:英文版[J]. 2018, 460-462, http://lib.cqvip.com/Qikan/Article/Detail?id=71806673504849564854484949.
[31] Hu, Yiheng, Zhao, Ran, Xu, Peng, Jiao, Yuannian. The Genome of Opium Poppy Reveals Evolutionary History of Morphinan Pathway. GENOMICS PROTEOMICS & BIOINFORMATICS[J]. 2018, 16(6): 460-462, http://lib.cqvip.com/Qikan/Article/Detail?id=71806673504849564854484949.
[32] Yue Liu, Wenli Zhang, Kang Zhang, Qi You, Hengyu Yan, Yuannian Jiao, Jiming Jiang, Wenying Xu, Zhen Su. Genome-wide mapping of DNase I hypersensitive sites reveals chromatin accessibility changes in Arabidopsis euchromatin and heterochromatin regions under extended darkness. SCIENTIFIC REPORTS[J]. 2017, 7(1): https://doaj.org/article/1f4815366fd04629ad8147b4c54bb5ae.
[33] Xia, Chuan, Zhang, Lichao, Zou, Cheng, Gu, Yongqiang, Duan, Jialei, Zhao, Guangyao, Wu, Jiajie, Liu, Yue, Fang, Xiaohua, Gao, Lifeng, Jiao, Yuannian, Sun, Jiaqiang, Pan, Yinghong, Liu, Xu, Jia, Jizeng, Kong, Xiuying. A TRIM insertion in the promoter of Ms2 causes male sterility in wheat. NATURE COMMUNICATIONS[J]. 2017, 8(1): https://doaj.org/article/52319968687d4103b3a90f328ac07187.
[34] Zhao, Guangyao, Zou, Cheng, Li, Kui, Wang, Kai, Li, Tianbao, Gao, Lifeng, Zhang, Xiaoxia, Wang, Hongjin, Yang, Zujun, Liu, Xu, Jiang, Wenkai, Mao, Long, Kong, Xiuying, Jiao, Yuannian, Jia, Jizeng. The Aegilops tauschii genome reveals multiple impacts of transposons. NATURE PLANTS[J]. 2017, 3(12): 946-955, http://ir.ibcas.ac.cn/handle/2S10CLM1/17275.
[35] Lee, HueyTyng, Golicz, Agnieszka A, Bayer, Philipp E, Jiao, Yuannian, Tang, Haibao, Paterson, Andrew H, Sablok, Gaurav, Krishnaraj, Rahul R, Chan, ChonKit Kenneth, Batley, Jacqueline, Kendrick, Gary A, Larkum, Anthony W D, Ralph, Peter J, Edwards, David. The Genome of a Southern Hemisphere Seagrass Species (Zostera muelleri). PLANT PHYSIOLOGY[J]. 2016, 172(1): 272-283, http://dx.doi.org/10.1104/pp.16.00868.
[36] 焦远年. The Genome of a Southern Hemisphere Seagrass Species (Zostera mueller). Plant Physiology. 2016, [37] Sezen, U Uzay, Barney, Jacob N, Atwater, Daniel Z, Pederson, Gary A, Pederson, Jeffrey F, Chandler, J Mike, Cox, T Stan, Cox, Sheila, Dotray, Peter, Kopec, David, Smith, Steven E, Schroeder, Jill, Wright, Steven D, Jiao, Yuannian, Kong, Wenqian, Goff, Valorie, Auckland, Susan, Rainville, Lisa K, Pierce, Gary J, Lemke, Cornelia, Compton, Rosana, Phillips, Christine, Kerr, Alexandra, Mettler, Matthew, Paterson, Andrew H. Multi-Phase US Spread and Habitat Switching of a Post-Columbian Invasive, Sorghum halepense. PLOS ONE[J]. 2016, 11(10): http://dx.doi.org/10.1371/journal.pone.0164584.
[38] Pu, Juan, Wang, Shuoguo, Yin, Yanbo, Zhang, Guozhong, Carter, Robert A, Wang, Jinliang, Xu, Guanlong, Sun, Honglei, Wang, Min, Wen, Chu, Wei, Yandi, Wang, Dongdong, Zhu, Baoli, Lemmon, Gordon, Jiao, Yuannian, Duan, Susu, Wang, Qian, Du, Qian, Sun, Meng, Bao, Jinnan, Sun, Yipeng, Zhao, Jixun, Zhang, Hui, Wu, Gang, Liu, Jinhua, Webster, Robert G. Evolution of the H9N2 influenza genotype that facilitated the genesis of the novel H7N9 virus. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA[J]. 2015, 112(2): 548-553, http://dx.doi.org/10.1073/pnas.1422456112.
[39] 焦远年. 整合共线性和系统发育树组分析揭示了单子叶植物分化早期古基因组加倍事件. Plant Cell. 2014, [40] Jiao, Yuannian, Guo, Hui, Paterson, AH. Prehistory of the Angiosperms: Characterization of the Ancient Genomes. GENOMES OF HERBACEOUS LAND PLANTSnull. 2014, 69: 223-245, https://www.webofscience.com/wos/woscc/full-record/WOS:000333377100009.
[41] 焦远年. 陆生植物进化过程中多倍化引起的基因组变化的研究. Philosophical Transactions of the Royal Society B. 2014, [42] Jiao, Yuannian, Li, Jingping, Tang, Haibao, Paterson, Andrew H. Integrated Syntenic and Phylogenomic Analyses Reveal an Ancient Genome Duplication in Monocots. PLANT CELL[J]. 2014, 26(7): 2792-2802, http://dx.doi.org/10.1105/tpc.114.127597.
[43] Ming, Ray, VanBuren, Robert, Liu, Yanling, Yang, Mei, Han, Yuepeng, Li, LeiTing, Zhang, Qiong, Kim, MinJeong, Schatz, Michael C, Campbell, Michael, Li, Jingping, Bowers, John E, Tang, Haibao, Lyons, Eric, Ferguson, Ann A, Narzisi, Giuseppe, Nelson, David R, BlabyHaas, Crysten E, Gschwend, Andrea R, Jiao, Yuannian, Der, Joshua P, Zeng, Fanchang, Han, Jennifer, Min, Xiang Jia, Hudson, Karen A, Singh, Ratnesh, Grennan, Aleel K, Karpowicz, Steven J, Watling, Jennifer R, Ito, Kikukatsu, Robinson, Sharon A, Hudson, Matthew E, Yu, Qingyi, Mockler, Todd C, Carroll, Andrew, Zheng, Yun, Sunkar, Ramanjulu, Jia, Ruizong, Chen, Nancy, Arro, Jie, Wai, Ching Man, Wafula, Eric, Spence, Ashley, Han, Yanni, Xu, Liming, Zhang, Jisen, Peery, Rhiannon, Haus, Miranda J, Xiong, Wenwei, Walsh, James A, Wu, Jun, Wang, MingLi, Zhu, Yun J, Paull, Robert E, Britt, Anne B, Du, Chunguang, Downie, Stephen R, Schuler, Mary A, Michael, Todd P, Long, Steve P, Ort, Donald R, Schopf, J William, Gang, David R, Jiang, Ning, Yandell, Mark, dePamphilis, Claude W, Merchant, Sabeeha S, Paterson, Andrew H, Buchanan, Bob B, Li, Shaohua, ShenMiller, Jane. Genome of the long-living sacred lotus (Nelumbo nucifera Gaertn.). GENOME BIOLOGY[J]. 2013, 14(5): R41-R41, http://oa.las.ac.cn/oainone/service/browseall/read1?ptype=JA&workid=JA201706309835478ZK.
[44] Zhang, Yeting, FernandezAparicio, Monica, Wafula, Eric K, Das, Malay, Jiao, Yuannian, Wickett, Norman J, Honaas, Loren A, Ralph, Paula E, Wojciechowski, Martin F, Timko, Michael P, Yoder, John I, Westwood, James H, dePamphilis, Claude W. Evolution of a horizontally acquired legume gene, albumin 1, in the parasitic plant Phelipanche aegyptiaca and related species. BMC EVOLUTIONARY BIOLOGY[J]. 2013, 13(1): 48-48, https://www.webofscience.com/wos/woscc/full-record/WOS:000316196600002.
[45] Bliss, Barbara J, Wanke, Stefan, Barakat, Abdelali, Ayyampalayam, Saravanaraj, Wickett, Norman, Wall, P Kerr, Jiao, Yuannian, Landherr, Lena, Ralph, Paula E, Hu, Yi, Neinhuis, Christoph, LeebensMack, Jim, Arumuganathan, Kathiravetpilla, Clifton, Sandra W, Maximova, Siela N, Ma, Hong, dePamphilis, Claude W. Characterization of the basal angiosperm Aristolochia fimbriata: a potential experimental system for genetic studies. BMC PLANT BIOLOGY[J]. 2013, 13(1): 13-13, http://dx.doi.org/10.1186/1471-2229-13-13.
[46] Albert, Victor A, Barbazuk, W Bradley, dePamphilis, Claude W, Der, Joshua P, LeebensMack, James, Ma, Hong, Palmer, Jeffrey D, Rounsley, Steve, Sankoff, David, Schuster, Stephan C, Soltis, Douglas E, Soltis, Pamela S, Wessler, Susan R, Wing, Rod A, Albert, Victor A, Ammiraju, Jetty S S, Barbazuk, W Bradley, Chamala, Srikar, Chanderbali, Andre S, dePamphilis, Claude W, Der, Joshua P, Determann, Ronald, LeebensMack, James, Ma, Hong, Ralph, Paula, Rounsley, Steve, Schuster, Stephan C, Soltis, Douglas E, Soltis, Pamela S, Talag, Jason, Tomsho, Lynn, Walts, Brandon, Wanke, Stefan, Wing, Rod A, Albert, Victor A, Barbazuk, W Bradley, Chamala, Srikar, Chanderbali, Andre S, Chang, TienHao, Determann, Ronald, Lan, Tianying, Soltis, Douglas E, Soltis, Pamela S, Arikit, Siwaret, Axtell, Michael J, Ayyampalayam, Saravanaraj, Barbazuk, W Bradley, Burnette, James M, III, Chamala, Srikar, De Paoli, Emanuele, dePamphilis, Claude W, Der, Joshua P, Estill, James C, Farrell, Nina P, Harkess, Alex, Jiao, Yuannian, LeebensMack, James, Liu, Kun, Mei, Wenbin, Meyers, Blake C, Shahid, Saima, Wafula, Eric, Walts, Brandon, Wessler, Susan R, Zhai, Jixian, Zhang, Xiaoyu, Albert, Victor A, CarreteroPaulet, Lorenzo, dePamphilis, Claude W, Der, Joshua P, Jiao, Yuannian, LeebensMack, James, Lyons, Eric, Sankoff, David, Tang, Haibao, Wafula, Eric, Zheng, Chunfang, Albert, Victor A, Altman, Naomi S, Barbazuk, W Bradley, CarreteroPaulet, Lorenzo, dePamphilis, Claude W, Der, Joshua P, Estill, James C, Jiao, Yuannian, LeebensMack, James, Liu, Kun, Mei, Wenbin, Wafula, Eric, Altman, Naomi S, Arikit, Siwaret, Axtell, Michael J, Chamala, Srikar, Chanderbali, Andre S, Chen, Feng, Chen, JianQun, Chiang, Vincent, De Paoli, Emanuele, dePamphilis, Claude W, Der, Joshua P, Determann, Ronald, Fogliani, Bruno, Guo, Chunce, Harholt, Jesper, Harkess, Alex, Job, Claudette, Job, Dominique, Kim, Sangtae, Kong, Hongzhi, LeebensMack, James, Li, Guanglin, Li, Lin, Liu, Jie, Ma, Hong, Meyers, Blake C, Park, Jongsun, Qi, Xinshuai, Rajjou, Loic, BurtetSarramegna, Valerie, Sederoff, Ron, Shahid, Saima, Soltis, Douglas E, Soltis, Pamela S, Sun, YingHsuan, Ulvskov, Peter, Villegente, Matthieu, Xue, JiaYu, Yeh, TingFeng, Yu, Xianxian, Zhai, Jixian, Acosta, Juan J, Albert, Victor A, Barbazuk, W Bradley, Bruenn, Riva A, Chamala, Srikar, de Kochko, Alexandre, dePamphilis, Claude W, Der, Joshua P, HerreraEstrella, Luis R, IbarraLaclette, Enrique, Kirst, Matias, LeebensMack, James, Pissis, Solon P, Poncet, Valerie, Schuster, Stephan C, Soltis, Douglas E, Soltis, Pamela S, Tomsho, Lynn, Amborella Genome Project. The Amborella Genome and the Evolution of Flowering Plants. SCIENCE[J]. 2013, 342(6165): 1467-+, http://ir.ibcas.ac.cn/handle/2S10CLM1/12719.
[47] Jiao, Yuannian, LeebensMack, Jim, Ayyampalayam, Saravanaraj, Bowers, John E, McKain, Michael R, McNeal, Joel, Rolf, Megan, Ruzicka, Daniel R, Wafula, Eric, Wickett, Norman J, Wu, Xiaolei, Zhang, Yong, Wang, Jun, Zhang, Yeting, Carpenter, Eric J, Deyholos, Michael K, Kutchan, Toni M, Chanderbali, Andre S, Soltis, Pamela S, Stevenson, Dennis W, McCombie, Richard, Pires, J Chris, Wong, Gane KaShu, Soltis, Douglas E, dePamphilis, Claude W. A genome triplication associated with early diversification of the core eudicots. GENOME BIOLOGY[J]. 2012, 13(1): R3-R3, http://dx.doi.org/10.1186/gb-2012-13-1-r3.
[48] 焦远年. 核心双子叶植物分化早期的六倍化事件研究. Genome Biology. 2012, [49] Liang, Haiying, Ayyampalayam, Saravanaraj, Wickett, Norman, Barakat, Abdelali, Xu, Yi, Landherr, Lena, Ralph, Paula E, Jiao, Yuannian, Xu, Tao, Schlarbaum, Scott E, Ma, Hong, LeebensMack, James H, dePamphilis, Claude W. Generation of a large-scale genomic resource for functional and comparative genomics in Liriodendron tulipifera L.. TREE GENETICS & GENOMES[J]. 2011, 7(5): 941-954, http://dx.doi.org/10.1007/s11295-011-0386-2.
[50] Zuccolo, Andrea, Bowers, John E, Estill, James C, Xiong, Zhiyong, Luo, Meizhong, Sebastian, Aswathy, Goicoechea, Jose Luis, Collura, Kristi, Yu, Yeisoo, Jiao, Yuannian, Duarte, Jill, Tang, Haibao, Ayyampalayam, Saravanaraj, Rounsley, Steve, Kudrna, Dave, Paterson, Andrew H, Pires, J Chris, Chanderbali, Andre, Soltis, Douglas E, Chamala, Srikar, Barbazuk, Brad, Soltis, Pamela S, Albert, Victor A, Ma, Hong, Mandoli, Dina, Banks, Jody, Carlson, John E, Tomkins, Jeffrey, dePamphilis, Claude W, Wing, Rod A, LeebensMack, Jim. A physical map for the Amborella trichopoda genome sheds light on the evolution of angiosperm genome structure. GENOME BIOLOGY[J]. 2011, 12(5): R48-R48, https://www.webofscience.com/wos/woscc/full-record/WOS:000295732700012.
[51] Jiao, Yuannian, Wickett, Norman J, Ayyampalayam, Saravanaraj, Chanderbali, Andre S, Landherr, Lena, Ralph, Paula E, Tomsho, Lynn P, Hu, Yi, Liang, Haiying, Soltis, Pamela S, Soltis, Douglas E, Clifton, Sandra W, Schlarbaum, Scott E, Schuster, Stephan C, Ma, Hong, LeebensMack, Jim, dePamphilis, Claude W. Ancestral polyploidy in seed plants and angiosperms. NATURE[J]. 2011, 473(7345): 97-U113, https://www.webofscience.com/wos/woscc/full-record/WOS:000290218300038.
[52] 焦远年. 关于种子植物和被子植物早期的古基因组多倍化事件的研究. Nature. 2011, [53] 郭华军, 焦远年, 邸超, 姚冬霞, 张盖华, 郑雪, 刘岚, 张群莲, 郭蔼光, 苏震. 拟南芥转录因子GRAS家族基因群响应渗透和干旱胁迫的初步探索. 植物学报[J]. 2009, 290-299, http://lib.cqvip.com/Qikan/Article/Detail?id=30471246.
[54] Yongming Chen, Wanjun Song, Xiaoming Xie, Zihao Wang, Panfeng Guan, Huiru Peng, Yuannian Jiao, Zhongfu Ni, Qixin Sun, Weilong Guo. A Collinearity-incorporating Homology Inference Strategy for Connecting Emerging Assemblies in Triticeae Tribe as a Pilot Practice in the Plant Pangenomic Era. MOLECULAR PLANT. http://dx.doi.org/10.1016/j.molp.2020.09.019.
发表著作
(1) 有花植物进化前的古基因组特征, Prehistory of the Angiosperms: Characterization of the Ancient Genomes, Academic Press LTD-Elsevier Science LTD, 2014-12, 第 1 作者

科研活动

   
参与会议
(1)Evolution of microRNAs and their targets after ancient polyploidizations in plants   国际植物和动物基因组学会议   2018-01-13
(2)Polyploidy-associated genome modifications during land plant evolution   国际植物动物基因组会议   2016-01-09
(3)Integrated Syntenic and Phylogenomic Analyses of Polyploidy Events in Monocots   国际植物动物基因组会议   2014-01-11
(4)Genomic Analysis of the Evolutionary History of Floral Genes   国际植物动物基因组会议   2012-01-14

指导学生

已指导学生

徐永欣  硕士研究生  071001-植物学  

武生聃  博士研究生  071001-植物学  

李笑霞  硕士研究生  085238-生物工程  

现指导学生

李鹍鹏  博士研究生  071001-植物学  

刘璐妹  博士研究生  071001-植物学  

闫学青  博士研究生  071001-植物学  

杨亚  硕士研究生  071001-植物学  

秦刘玉  博士研究生  071001-植物学  

秦天  硕士研究生  071001-植物学  

胡昳恒  博士研究生  071001-植物学  

王晓亮  博士研究生  071001-植物学  

段雪倩  硕士研究生  071001-植物学  

王金朋  博士研究生  071001-植物学  

徐鹏  博士研究生  071001-植物学