基本信息
刘进贤  男  博导  中国科学院海洋研究所
电子邮件: jxliu@qdio.ac.cn
通信地址: 山东省青岛市南海路7号
邮政编码: 266071

招生信息

   
招生专业
0707Z1-海洋生态学
招生方向
生物资源生态学

教育背景

2001-09--2006-07   中国海洋大学   博士
1997-09--2001-07   中国海洋大学   学士

工作经历

   
工作简历
2011-09~现在, 中国科学院海洋研究所海洋生态与环境研究室, 研究员
2010-10~2011-07,University of California, Irvine, 研究助理
2009-09~2010-09,University of California, Irvine, 博士后
2007-01~2009-08,University of South Carolina, 博士后
2001-09~2006-07,中国海洋大学, 博士
1997-09~2001-07,中国海洋大学, 学士

出版信息

   
发表论文
(1) Temporal genetic stability despite decades of overexploitation for large yellow croaker in the East China Sea, Frontiers in Marine Science, 2022, 通讯作者
(2) A high-quality chromosome-level genome of the endangered roughskin sculpin provides insights into its evolution and adaptation, MOLECULAR ECOLOGY RESOURCES, 2022, 通讯作者
(3) Anthropogenic influences on genetic diversity and differentiation of the clearhead icefish (Protosalanx hyalocranius), as revealed by mitochondrial and microsatellite DNA markers, REGIONAL STUDIES IN MARINE SCIENCE, 2022, 通讯作者
(4) Genomic Architecture of Rapid Parallel Adaptation to Fresh Water in a Wild Fish, MOLECULAR BIOLOGY AND EVOLUTION, 2021, 通讯作者
(5) Resolving the origins of invertebrate colonists in the Yangtze River Estuary with molecular markers: Implications for ecological connectivity, ECOLOGY AND EVOLUTION, 2021, 通讯作者
(6) Female-specific genomic regions and molecular sex identification of the clearhead icefish (Protosalanx hyalocranius), BMC GENOMICS, 2021, 第 3 作者
(7) Genome-wide association analyses based on whole-genome sequencing of Protosalanx hyalocranius provide insights into sex determination of Salangid fishes, MOLECULAR ECOLOGY RESOURCES, 2020, 通讯作者
(8) Differences in reproductive effort and sexual recruitment of the seagrass Zostera japonica between two geographic populations in northern China, MARINE ECOLOGY PROGRESS SERIES, 2020, 第 10 作者
(9) Population genomic evidence for high genetic connectivity among populations of small yellow croaker (Larimichthys polyactis) in inshore waters of China, FISHERIES RESEARCH, 2020, 通讯作者
(10) Genome-Wide Discovery of Single-Nucleotide Polymorphisms and Their Application in Population Genetic Studies in the Endangered Japanese Eel (Anguilla japonica), FRONTIERS IN MARINE SCIENCE, 2020, 通讯作者
(11) Gene-associated microsatellite markers confi rm panmixia and indicate a diff erent pattern of spatially varying selection in the endangered Japanese eel Anguilla japonica, Gene-associated microsatellite markers confirm panmixia and indicate a different pattern of spatially varying selection in the endangered Japanese eel Anguilla japonica, JOURNAL OF OCEANOLOGY AND LIMNOLOGY, 2020, 通讯作者
(12) Population Genomics Reveals Shallow Genetic Structure in a Connected and Ecologically Important Fish From the Northwestern Pacific Ocean, FRONTIERS IN MARINE SCIENCE, 2020, 通讯作者
(13) Genetic variation within and among range-wide populations of three ecotypes of the Japanese grenadier anchovy Coilia nasus with implications to its conservation and management, Genetic variation within and among range-wide populations of three ecotypes of the Japanese grenadier anchovy Coilia nasus with implications to its conservation and management, JOURNAL OF OCEANOLOGY AND LIMNOLOGY, 2020, 通讯作者
(14) 历史DNA在鱼类群体遗传与进化研究中的应用, Application of historical DNA in study of fish population genetics and evolution, 海洋科学, 2020, 第 2 作者
(15) Development of microsatellite markers for the seagrass Zostera japonica using next-generation sequencing, MOLECULAR BIOLOGY REPORTS, 2019, 通讯作者
(16) First mitochondrial genome of a periwinkle from the genus Littoraria: Littoraria sinensis, MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 通讯作者
(17) Comprehensive assessment of population genetic structure of the overexploited Japanese grenadier anchovy (Coilia nasus): Implications for fisheries management and conservation, FISHERIES RESEARCH, 2019, 通讯作者
(18) Population Genomic Signatures of Genetic Structure and Environmental Selection in the Catadromous Roughskin Sculpin Trachidermus fasciatus, GENOME BIOLOGY AND EVOLUTION, 2019, 通讯作者
(19) RAD genotyping reveals fine-scale population structure and provides evidence for adaptive divergence in a commercially important fish from the northwestern Pacific Ocean, PEERJ, 2019, 通讯作者
(20) 日本鳗鲡离散SNP标记筛选及群体遗传多样性分析, Outlier SNPs Development and Preliminary Genetic Diversity Analysis of Japanese Eel(Anguilla japonica), 中国海洋大学学报:自然科学版, 2018, 第 3 作者
(21) STRUCTURESELECTOR:A web-based software to select and visualize the optimal number of clusters using multiple methods, MOLECULAR ECOLOGY RESOURCES, 2018, 通讯作者
(22) An optimized approach for local de novo assembly of overlapping paired-end RAD reads from multiple individuals, ROYAL SOCIETY OPEN SCIENCE, 2018, 通讯作者
(23) Successful worldwide invasion of the veined rapa whelk, Rapana venosa, despite a dramatic genetic bottleneck, BIOLOGICAL INVASIONS, 2018, 通讯作者
(24) Signatures of temporal genetic differentiation of the small yellow croaker (larimichthys polyactis) revealed by microsatellite markers, FISHERIES RESEARCH, 2017, 通讯作者
(25) A rapid and cost-effective approach for the development of polymorphic microsatellites in non-model species using paired-end RAD sequencing, MOLECULAR GENETICS AND GENOMICS, 2017, 通讯作者
(26) Genetic diversity and population structure of the veined rapa whelk Rapana venosa along the coast of China based on microsatellites, FISHERIES SCIENCE, 2017, 第 4 作者
(27) Genetic diversity and population structure of the veined rapa whelk rapana venosa along the coast of china based on microsatellites, FISHERIES SCIENCE, 2017, 通讯作者
(28) Genetic diversity and population structure of the roughskin sculpin (Trachidermus fasciatus Heckel) inferred from microsatellite analyses: implications for its conservation and management, CONSERVATION GENETICS, 2016, 通讯作者
(29) Development and preliminary evaluation of a genomewide single nucleotide polymorphisms resource generated by RAD-seq for the small yellow croaker (Larimichthys polyactis), MOLECULAR ECOLOGY RESOURCES, 2016, 通讯作者
(30) Genetic diversity and population structure of the roughskin sculpin ( Trachidermus fasciatus Heckel) inferred from microsatellite analyses: implications for its conservation and management, CONSERVATION GENETICS, 2016, 第 4 作者
(31) Genetic divergence of the endangered seagrass Zostera japonica Ascherson & Graebner between temperate and subtropical coasts of China based on partial sequences of matK and ITS, BIOCHEMICAL SYSTEMATICS AND ECOLOGY, 2016, 通讯作者
(32) Influences of population density on polyandry and patterns of sperm usage in the marine gastropod Rapana venosa, SCIENTIFIC REPORTS, 2016, 通讯作者
(33) Population Structure and Adaptive Divergence in a High Gene Flow Marine Fish: The Small Yellow Croaker ( Larimichthys polyactis ), PLOS ONE, 2016, 通讯作者
(34) Genome-Wide SNP Discovery, Genotyping and Their Preliminary Applications for Population Genetic Inference in Spotted Sea Bass ( Lateolabrax maculatus ), PLOS ONE, 2016, 通讯作者
(35) 中国北方沿海竿虾虎鱼(Luciogobius guttatus)隐存多样性与群体历史动态, CRYPTIC DIVERSITY AND DEMOGRAPHICAL HISTORY OF LUCIOGOBIUS GUTTATUS IN NORTHERN CHINA, 海洋与湖沼, 2016, 第 3 作者
(36) DEVELOPMENT OF MICROSATELLITE LOCI FOR THE ENDANGERED SEAGRASS ZOSTERA JAPONICA (ZOSTERACEAE), APPLICATIONS IN PLANT SCIENCES, 2015, 第 4 作者
(37) Isolation and characterization of 11 polymorphic microsatellite loci in the Japanese halfbeak, Hyporhamphus sajori, CONSERVATION GENETICS RESOURCES, 2015, 通讯作者
(38) Isolation and characterization of 20 polymorphic microsatellite loci in the dark sleeper (Odontobutis yaluensis), CONSERVATION GENETICS RESOURCES, 2015, 通讯作者
(39) Microsatellite Evidence for High Frequency of Multiple Paternity in the Marine Gastropod Rapana venosa, PLOS ONE, 2014, 通讯作者
(40) Population Genetic Structure and Demographic History of Atrina pectinata Based on Mitochondrial DNA and Microsatellite Markers, PLOS ONE, 2014, 第 4 作者
(41) Development and characterization of 17 microsatellite loci in an anadromous fish Coilia nasus, CONSERVATION GENETICS RESOURCES, 2014, 通讯作者
(42) Development of 17 novel polymorphic microsatellites in the small yellow croaker Larimichthys polyactis, CONSERVATION GENETICS RESOURCES, 2014, 通讯作者
(43) Isolation and characterization of 24 polymorphic microsatellite loci for the veined rapa whelk, Rapana venosa, CONSERVATION GENETICS RESOURCES, 2014, 通讯作者
(44) Molecular Evidence for Multiple Paternity in a Population of the Viviparous Tule Perch Hysterocarpus traski, JOURNAL OF HEREDITY, 2013, 通讯作者
(45) Effects of Pleistocene climatic fluctuations on the phylogeographic and demographic histories of Pacific herring (Clupea pallasii), MOLECULAR ECOLOGY, 2011, 通讯作者
(46) High levels of multiple paternity in the viviparous shiner perch, Cymatogaster aggregata, a fish with long-term female sperm-storage, Marine Biology, 2011, 第 1 作者
(47) On the temporal inconsistency of Linnean taxonomic ranks, Biological Journal of the Linnean Society, 2011, 第 1 作者
(48) Multiple mating and its relationship to brood size in pregnant fishes versus pregnant mammals and other viviparous vertebrates, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2011, 第 2 作者
(49) Multiple Mating and its Relationship to Clutch Size in Invertebrate Brooders Versus Pregnant Vertebrates: An Alternative Null Perspective on Animal Mating Systems, Proceedings of the National Academy of Sciences of United States of America, 2011, 第 1 作者
(50) Multiple mating and its relationship to alternative modes of gestation in male-pregnant versus female-pregnant fish species, PROCEEDINGSOFTHENATIONALACADEMYOFSCIENCESOFTHEUNITEDSTATESOFAMERICA, 2010, 第 2 作者
(51) Evolution of an MHC class Ia gene fragment in four North American Morone species, JOURNAL OF FISH BIOLOGY, 2010, 
(52) Sibship reconstruction demonstrates the extremely low effective population size of striped bass Morone saxatilis in the Santee-Cooper system, South Carolina, USA, MOLECULAR ECOLOGY, 2009, 第 1 作者
(53) Complex evolution of a highly conserved microsatellite locus in several fish species, JOURNAL OF FISH BIOLOGY, 2009, 
(54) Pleistocene isolation in the Northwestern Pacific marginal seas and limited dispersal in a marine fishes, Chelon haematocheilus (Temminck and Schlegel, 1845), Molecular Ecology, 2007, 第 1 作者
(55) Late Pleistocene divergence and subsequent population expansion of two closely related fish species, Japanese anchovy (Engraulis japonicus) and Australian anchovy (Engraulis australis), MOLECULAR PHYLOGENETICS AND EVOLUTION, 2006, 第 1 作者
(56) Differential population structuring and demographic history of two closely related fish species, Japanese sea bass (Lateolabrax japonicus) and spotted sea bass (Lateolabrax maculatus) in Northwestern Pacific, MOLECULAR PHYLOGENETICS AND EVOLUTION, 2006, 第 1 作者
(57) Development of microsatellite loci for the endangered seagrass Zostera japonica (Zosteraceae) 1, APPLICATIONS IN PLANT SCIENCES, 第 4 作者
发表著作
The sea cucumber Apostichopus japonicus: history, biology and aquaculture, Academic Pres/Elsevier, 2015-07, 第 5 作者

科研活动

   
科研项目
( 1 ) 脉红螺Rapana venosa雌性多次交配行为和精子竞争研究, 负责人, 国家任务, 2013-01--2015-12
( 2 ) 中国科学院****人才项目-海洋生物分子生态学研究, 负责人, 中国科学院计划, 2013-01--2015-12
( 3 ) 海洋生态与环境科学研究中心, 参与, 国家任务, 2014-07--2018-06
( 4 ) 鳌山人才优秀青年学者项目-海洋鱼类分子生态学, 负责人, 国家任务, 2015-01--2017-12
( 5 ) 蓝色生物资源开发利用—近海生物资源养护技术, 参与, 国家任务, 2015-08--2016-09
( 6 ) 基于简化基因组测序的日本鳗鲡种群遗传结构及本地适应性进化研究, 负责人, 国家任务, 2017-01--2020-12
( 7 ) 全球变化背景下西北太平洋短滨螺群体遗传结构及适应性进化研究, 负责人, 国家任务, 2020-01--2023-12
( 8 ) 基于多组学解析松江鲈对环境变化的适应策略及机制, 参与, 国家任务, 2020-01--2023-12
( 9 ) 基于群体基因组学的中国沿海黑鲷群体遗传变异格局与本地适应性进 化研究, 参与, 国家任务, 2020-01--2022-12
( 10 ) 短吻新银鱼不同生态型适应性进化遗传机制的群体基因组学研究, 负责人, 国家任务, 2022-01--2025-12
参与会议
(1)Phylogeographic history and genomic architecture of rapid parallel adaptation to fresh water in a wild fish   2021 第二届亚洲演化生物学大会   2021-08-16
(2)Genetic diversity and population genetic structure of small yellow croaker (Larimichthys polyactis) and its implication for management and migratory pattern   2015-08-21