基本信息
夏晓勤 男 博导 水生生物研究所
电子邮件:x q x i a @ i h b . a c . c n
通信地址:武汉市武昌区东湖南路7号水生生物研究所
邮政编码:430072

研究领域

基因组学与生物信息学

教育背景

1992-09--1997-07 中国科学院水生生物研究所 理学博士
1988-09--1992-07 武汉大学生物学系 理学学士
学历
研究生
学位
理学博士

工作经历

2011 –   
    中国科学院水生生物研究所    研究员(“****”)
2010 –2011  
    加州大学欧文分校病理学与检验医学系    Assistant Project Scientist step II
2009 –2011  
    美国加州圣迭戈疫苗研究所 Director of Bioinformatics Group and Genomics Core
2004 – 2009 
    美国加州 Sidney Kimmel 癌症研究中心 Director of Lechner-Haag Genomics Core
2000 – 2003 
    剑桥大学通信系统研究中心,剑桥大学遗传学系 Bioinformatics Research Associate
1997 – 2000 
    南京农业大学动物医学院农业部重点实验室    博士后,副教授 

出版信息

   
发表论文
[1] Cheng Guo, Weidong Ye, Mijuan Shi, You Duan, Wanting Zhang, Yingyin Cheng, Xiao-Qin Xia. FishSCT: a zebrafish-centric database for exploration and visualization of fish single-cell transcriptome. 中国科学:生命科学(英文版)[J]. 2023, [2] Gang, Ouyang, Yuan, Le, Xia, XiaoQin, Zhang, Wanting, Shi, Mijuan. Transcriptomes of Zebrafish in Early Stages of Multiple Viral Invasions Reveal the Role of Sterols in Innate Immune Switch-On. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES[J]. 2023, 24(5): http://dx.doi.org/10.3390/ijms24054427.
[3] Xuyang Zhao, Yuhang Liu, Jiayuan Xie, Lei Zhang, Qingsong Zhu, Lian Su, Cheng Guo, Heng Li, Guangxin Wang, Wanting Zhang, Yingyin Cheng, Nan Wu, XiaoQin Xia. The manipulation of cell suspensions from zebrafish intestinal mucosa contributes to understanding enteritis. FRONTIERS IN IMMUNOLOGY[J]. 2023, 14: https://doaj.org/article/df44bd2b540d43a183ee6860694c4e24.
[4] Junwei Shan, Guangxin Wang, Heng Li, Xuyang Zhao, Weidong Ye, Lian Su, Qingsong Zhu, Yuhang Liu, Yingyin Cheng, Wanting Zhang, Nan Wu, XiaoQin Xia. The immunoregulatory role of fish specific type II SOCS via inhibiting metaflammation in the gut-liver axis. WATER BIOLOGY AND SECURITY[J]. 2023, 2(2): 100131-, http://dx.doi.org/10.1016/j.watbs.2022.100131.
[5] Ye, Weidong, Shi, Mijuan, Ren, Keyi, Liu, Yuhang, Duan, You, Cheng, Yingyin, Zhang, Wanting, Xia, XiaoQin. Profiling the Spatial Expression Pattern and ceRNA Network of lncRNA, miRNA, and mRNA Associated with the Development of Intermuscular Bones in Zebrafish. BIOLOGY-BASEL[J]. 2023, 12(1): [6] Cheng Guo, You Duan, Weidong Ye, Wanting Zhang, Yingyin Cheng, Mijuan Shi, XiaoQin Xia. FishGET: A fish gene expression and transcriptome database with improved accuracy and visualization. ISCIENCE[J]. 2023, 26(4): 106539-, http://dx.doi.org/10.1016/j.isci.2023.106539.
[7] He, Wenping, Shi, Mijuan, Xia, XiaoQin, Zhang, Wanting, Yao, Weizhi, Gao, Tianxiang. The chromosome-level genome assembly of goldstripe ponyfish (Karalla daura) reveals its similarity to Chinese sillago on contracted immune gene families. FRONTIERS IN MARINE SCIENCE[J]. 2022, 9: [8] Ming Li, Xuyang Zhao, Jiayuan Xie, Xinyu Tong, Junwei Shan, Mijuan Shi, Guangxin Wang, Weidong Ye, Yuhang Liu, Bruno Hamish Unger, Yingyin Cheng, Wanting Zhang, Nan Wu, XiaoQin Xia. Dietary Inclusion of Seabuckthorn (Hippophae rhamnoides) Mitigates Foodborne Enteritis in Zebrafish Through the Gut-Liver Immune Axis. FRONTIERS IN PHYSIOLOGY[J]. 2022, 13: [9] Zheng, Zhiyi, Gorden, Patrick J, Xia, Xiaoqin, Zheng, Ying, Li, Ganwu. Whole-genome analysis of Klebsiella pneumoniae from bovine mastitis milk in the US. ENVIRONMENTAL MICROBIOLOGY[J]. 2022, 24(3): 1183-1199, http://dx.doi.org/10.1111/1462-2920.15721.
[10] 石米娟, 张婉婷, 程莹寅, 夏晓勤. 基于全基因组分析技术的鱼类育种技术原理与应用. 中国农业科技导报[J]. 2022, 24(2): 33-41, http://lib.cqvip.com/Qikan/Article/Detail?id=7106891665.
[11] Li, Heng, Shi, Mijuan, Ren, Keyi, Zhang, Lei, Ye, Weidong, Zhang, Wanting, Cheng, Yingyin, Xia, XiaoQin. Visual Omics: a web-based platform for omics data analysis and visualization with rich graph-tuning capabilities. BIOINFORMATICS. 2022, 39(1): http://dx.doi.org/10.1093/bioinformatics/btac777.
[12] Duan, You, Zhang, Qiangxiang, Jiang, Yanxin, Zhang, Wanting, Cheng, Yingyin, Shi, Mijuan, Xia, XiaoQin. Dynamic Transcriptional Landscape of Grass Carp (Ctenopharyngodon idella) Reveals Key Transcriptional Features Involved in Fish Development. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES[J]. 2022, 23(19): http://dx.doi.org/10.3390/ijms231911547.
[13] 黎明, 谢家元, 赵旭阳, 李晓敏, 王锐, 单俊玮, 程莹寅, 张婉婷, 吴南, 夏晓勤. 斑马鱼食源性肠炎模型及其免疫细胞成像分析方法的建立. 水生生物学报[J]. 2022, 46(2): 226-237, http://ssswxb.ihb.ac.cn/article/doi/10.7541/2021.2021.104?viewType=HTML.
[14] Shi, Mijuan, Luo, Hongrui, Zhang, Wanting, Jiang, Yinjun, Chen, Ji, Cheng, Yingyin, Hu, Wei, Xia, XiaoQin. A genome-wide linkage map and QTL mapping for growth traits of Asian rice-field eel ( Monopterus albus ). AQUACULTURE[J]. 2021, 536: http://dx.doi.org/10.1016/j.aquaculture.2021.736394.
[15] Jiayuan Xie, Ming Li, Weidong Ye, Junwei Shan, Xuyang Zhao, You Duan, Yuhang Liu, Bruno Hamish Unger, Yingyin Cheng, Wanting Zhang, Nan Wu, XiaoQin Xia. Sinomenine Hydrochloride Ameliorates Fish Foodborne Enteritis via α7nAchR-Mediated Anti-Inflammatory Effect Whilst Altering Microbiota Composition. FRONTIERS IN IMMUNOLOGY[J]. 2021, 12: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8650311/.
[16] Huang, Rong, Shi, Mijuan, Luo, Lifei, Yang, Cheng, Ou, Mi, Zhang, Wanting, Liao, Lanjie, Li, Yongming, Xia, XiaoQin, Zhu, Zuoyan, Wang, Yaping. De novo screening of disease-resistant genes from the chromosome-level genome of rare minnow using CRISPR-cas9 random mutation. GIGASCIENCE. 2021, 10(11): http://dx.doi.org/10.1093/gigascience/giab075.
[17] Ye, Weidong, Duan, You, Zhang, Wanting, Cheng, Yingyin, Shi, Mijuan, Xia, XiaoQin. Comprehensive analysis of hub mRNA, lncRNA and miRNA, and associated ceRNA networks implicated in grass carp (Ctenopharyngodon idella) growth traits. GENOMICS[J]. 2021, 113(6): 4004-4014, http://dx.doi.org/10.1016/j.ygeno.2021.10.001.
[18] Jia, Zhiying, Wu, Nan, Jiang, Xiaona, Li, Heng, Sun, Jiaxin, Shi, Mijuan, Li, Chitao, Ge, Yanlong, Hu, Xuesong, Ye, Weidong, Tang, Ying, Shan, Junwei, Cheng, Yingyin, Xia, XiaoQin, Shi, Lianyu. Integrative Transcriptomic Analysis Reveals the Immune Mechanism for a CyHV-3-Resistant Common Carp Strain. FRONTIERS IN IMMUNOLOGY[J]. 2021, 12: http://dx.doi.org/10.3389/fimmu.2021.687151.
[19] Duan, You, Zhang, Wanting, Cheng, Yingyin, Shi, Mijuan, Xia, XiaoQin. A systematic evaluation of bioinformatics tools for identification of long noncoding RNAs. RNA[J]. 2021, 27(1): 80-98, http://dx.doi.org/10.1261/rna.074724.120.
[20] Huang, Xiaoli, Jiang, Yanxin, Zhang, Wanting, Cheng, Yingyin, Wang, Yaping, Ma, Xiaocui, Duan, You, Xia, Lei, Chen, Yaxin, Wu, Nan, Shi, Mijuan, Xia, XiaoQin. Construction of a high-density genetic map and mapping of growth related QTLs in the grass carp (Ctenopharyngodon idellus). BMC GENOMICS[J]. 2020, 21(1): http://dx.doi.org/10.1186/s12864-020-6730-x.
[21] Clifton, Bryan D, Jimenez, Jamie, Kimura, Ashlyn, Chahine, Zeinab, Librado, Pablo, SanchezGracia, Alejandro, Abbassi, Mashya, Carranza, Francisco, Chan, Carolus, Marchetti, Marcella, Zhang, Wanting, Shi, Mijuan, Vu, Christine, Yeh, Shudan, Fanti, Laura, Xia, XiaoQin, Rozas, Julio, Ranz, Jose M. Understanding the Early Evolutionary Stages of a Tandem Drosophila melanogaster-Specific Gene Family: A Structural and Functional Population Study. MOLECULAR BIOLOGY AND EVOLUTION[J]. 2020, 37(9): 2584-2600, https://www.webofscience.com/wos/woscc/full-record/WOS:000574386500010.
[22] Ma, Xiaocui, Zhang, Baolong, Miao, Rongli, Deng, Xuan, Duan, You, Cheng, Yingyin, Zhang, Wanting, Shi, Mijuan, Huang, Kaiyao, Xia, XiaoQin. Transcriptomic and Physiological Responses to Oxidative Stress in a Chlamydomonas reinhardtii Glutathione Peroxidase Mutant. GENES[J]. 2020, 11(4): http://apps.webofknowledge.com/CitedFullRecord.do?product=UA&colName=WOS&SID=5CCFccWmJJRAuMzNPjj&search_mode=CitedFullRecord&isickref=WOS:000537224600073.
[23] Shi, Mijuan, Zhang, Qiangxiang, Li, Yongming, Zhang, Wanting, Liao, Lanjie, Cheng, Yingyin, Jiang, Yanxin, Huang, Xiaoli, Duan, You, Xia, Lei, Ye, Weidong, Wang, Yaping, Xia, XiaoQin. Global gene expression profile under low-temperature conditions in the brain of the grass carp (Ctenopharyngodon idellus). PLOS ONE[J]. 2020, 15(9): https://doaj.org/article/0b05349e78c54eefa64eb5bafc25a785.
[24] Ma, Xiaocui, Wei, Haiyan, Zhang, Yaodong, Duan, You, Zhang, Wanting, Cheng, Yingyin, Xia, XiaoQin, Shi, Mijuan. Glutathione peroxidase 5 deficiency induces lipid metabolism regulated by reactive oxygen species in Chlamydomonas reinhardtii. MICROBIAL PATHOGENESIS[J]. 2020, 147: http://dx.doi.org/10.1016/j.micpath.2020.104358.
[25] 夏晓勤. Understanding the early evolutionary stages of a tandem D. melanogaster-specific gene family: a structural and functional population study. Molecular Biology and Evolution. 2020, [26] Wu, Nan, Xu, Xuan, Wang, Biao, Li, XianMei, Cheng, YingYin, Li, Ming, Xia, XiaoQin, Zhang, YongAn. Anti-foodborne enteritis effect of galantamine potentially via acetylcholine anti-inflammatory pathway in fish. FISH & SHELLFISH IMMUNOLOGY[J]. 2020, 97: 204-215, http://dx.doi.org/10.1016/j.fsi.2019.12.028.
[27] 夏雷, 石米娟, 张婉婷, 段攸, 程莹寅, 吴南, 夏晓勤. 基于微单体型分子标记的草鱼亲子鉴定方法. 水生生物学报[J]. 2020, 44(3): 509-517, https://kns.cnki.net/KCMS/detail/detail.aspx?dbcode=CJFQ&dbname=CJFDLAST2020&filename=SSWX202003007&v=MjI0OTF1RnlqbFVydlBOajdjZHJHNEhOSE1ySTlGWTRSOGVYMUx1eFlTN0RoMVQzcVRyV00xRnJDVVI3cWVadWQ=.
[28] Lu, XiaoBing, Chen, YaXin, Cui, ZhengWei, Zhang, XiangYang, Lu, LongFeng, Li, Shun, Xia, XiaoQin, Nie, Pin, Zhang, YongAn. Characterization of grass carp CD40 and CD154 genes and the association between their polymorphisms and resistance to grass carp reovirus. FISH & SHELLFISH IMMUNOLOGY[J]. 2018, 81(1): 304-308, http://dx.doi.org/10.1016/j.fsi.2018.07.037.
[29] Chen, Yaxin, Shi, Mijuan, Cheng, Yingyin, Zhang, Wanting, Tang, Qin, Xia, XiaoQin. FVD: The fish-associated virus database. INFECTION GENETICS AND EVOLUTION[J]. 2018, 58: 23-26, http://dx.doi.org/10.1016/j.meegid.2017.11.004.
[30] Xia, Hui, Zhong, Chengrong, Wu, Xingxing, Chen, Ji, Tao, Binbin, Xia, Xiaoqin, Shi, Mijuan, Zhu, Zuoyan, Trudeau, Vance L, Hu, Wei. Mettl3 Mutation Disrupts Gamete Maturation and Reduces Fertility in Zebrafish. GENETICS[J]. 2018, 208(2): 729-743, http://www.irgrid.ac.cn/handle/1471x/1760665.
[31] 黄晓丽, 夏晓勤, 陆承平, 张婉婷, 程莹寅, 石米娟. 寄生于鲫的锚首虫一新种. 水生生物学报[J]. 2018, 42(2): 369-372, http://lib.cqvip.com/Qikan/Article/Detail?id=7000456165.
[32] Chen, Yaxin, Shi, Mijuan, Zhang, Wanting, Cheng, Yingyin, Wang, Yaping, Xia, XiaoQin. The Grass Carp Genome Database (GCGD): an online platform for genome features and annotations. DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION[J]. 2017, 2017(1): https://www.webofscience.com/wos/woscc/full-record/WOS:000407487700001.
[33] Zhang, Jianqiang, Zheng, Ying, Xia, XiaoQin, Chen, Qi, Bade, Sarah A, Yoon, KyoungJin, Harmon, Karen M, Gauger, Phillip C, Main, Rodger G, Li, Ganwu. High-throughput whole genome sequencing of Porcine reproductive and respiratory syndrome virus from cell culture materials and clinical specimens using next-generation sequencing technology. JOURNAL OF VETERINARY DIAGNOSTIC INVESTIGATION[J]. 2017, 29(1): 41-50, https://www.webofscience.com/wos/woscc/full-record/WOS:000394346700005.
[34] Clifton, Bryan D, Librado, Pablo, Yeh, ShuDan, Solares, Edwin S, Real, Daphne A, Jayasekera, Suvini U, Zhang, Wanting, Shi, Mijuan, Park, Ronni V, Magie, Robert D, Ma, HsiuChing, Xia, XiaoQin, Marco, Antonio, Rozas, Julio, Ranz, Jose M. Rapid Functional and Sequence Differentiation of a Tandemly Repeated Species-Specific Multigene Family in Drosophila. MOLECULAR BIOLOGY AND EVOLUTION[J]. 2017, 34(1): 51-65, http://dx.doi.org/10.1093/molbev/msw212.
[35] Yang, HeeJeong, Bogomolnaya, Lydia M, Elfenbein, Johanna R, EndicottYazdani, Tiana, Reynolds, M Megan, Porwollik, Steffen, Cheng, Pui, Xia, XiaoQin, McClelland, Michael, AndrewsPolymenis, Helene. Novel Two-Step Hierarchical Screening of Mutant Pools Reveals Mutants under Selection in Chicks. INFECTION AND IMMUNITY[J]. 2016, 84(4): 1226-1238, [36] 夏晓勤, 张婉婷, 程莹寅, 石米娟. 浅析基因组大小的进化机制. 科学通报[J]. 2016, 61(30): 3188-3195, http://www.irgrid.ac.cn/handle/1471x/1759990.
[37] Wu, Nan, Song, YuLong, Wang, Bei, Zhang, XiangYang, Zhang, XuJie, Wang, YaLi, Cheng, YingYin, Chen, DanDan, Xia, XiaoQin, Lu, YiShan, Zhang, YongAn. Fish gut-liver immunity during homeostasis or inflammation revealed by integrative transcriptome and proteome studies. SCIENTIFIC REPORTS[J]. 2016, 6: https://www.webofscience.com/wos/woscc/full-record/WOS:000386846400001.
[38] Zhang, Nu, Zhang, XuJie, Song, YuLong, Lu, XiaoBing, Chen, DanDan, Xia, XiaoQin, Sunyer, J Oriol, Zhang, YongAn. Preferential combination between the light and heavy chain isotypes of fish immunoglobulins. DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY[J]. 2016, 61: 169-179, http://dx.doi.org/10.1016/j.dci.2016.04.001.
[39] Wang, Yaping, Lu, Ying, Zhang, Yong, Ning, Zemin, Li, Yan, Zhao, Qiang, Lu, Hengyun, Huang, Rong, Xia, Xiaoqin, Feng, Qi, Liang, Xufang, Liu, Kunyan, Zhang, Lei, Lu, Tingting, Huang, Tao, Fan, Danlin, Weng, Qijun, Zhu, Chuanrang, Lu, Yiqi, Li, Wenjun, Wen, Ziruo, Zhou, Congcong, Tian, Qilin, Kang, Xiaojun, Shi, Mijuan, Zhang, Wanting, Jang, Songhun, Du, Fukuan, He, Shan, Liao, Lanjie, Li, Yongming, Gui, Bin, He, Huihui, Ning, Zhen, Yang, Cheng, He, Libo, Luo, Lifei, Yang, Rui, Luo, Qiong, Liu, Xiaochun, Li, Shuisheng, Huang, Wen, Xiao, Ling, Lin, Haoran, Han, Bin, Zhu, Zuoyan. The draft genome of the grass carp (Ctenopharyngodon idellus) provides insights into its evolution and vegetarian adaptation. NATURE GENETICS[J]. 2015, 47(6): 625-631, http://www.irgrid.ac.cn/handle/1471x/978707.
[40] Jia, Zhenyu, Rahmatpanah, Farah, Chen, Xin, Lernhardt, Waldemar, Wang, Yipeng, Xia, XiaoQin, Sawyers, Anne, McClelland, Michael, Mercola, Dan. A stroma-based 15 gene profile for prostate cancer suggests increased DNA methylation and senescence in the stroma of patients with poor prognosis. CANCER RESEARCH[J]. 2015, 75(1): https://www.webofscience.com/wos/woscc/full-record/WOS:000356630300045.
[41] Tang, Qin, Song, Yulong, Shi, Mijuan, Cheng, Yingyin, Zhang, Wanting, Xia, XiaoQin. Inferring the hosts of coronavirus using dual statistical models based on nucleotide composition. SCIENTIFIC REPORTS[J]. 2015, 5: http://www.irgrid.ac.cn/handle/1471x/1012146.
[42] Luo, Daji, Liu, Yun, Chen, Ji, Xia, Xiaoqin, Cao, Mengxi, Cheng, Bin, Wang, Xuejuan, Gong, Wuming, Qiu, Chao, Zhang, Yunsheng, Cheng, Christopher Hon Ki, Zhu, Zuoyan, Hu, Wei. Direct production of XYDMY- sex reversal female medaka (Oryzias latipes) by embryo microinjection of TALENs. SCIENTIFIC REPORTS[J]. 2015, 5: http://www.irgrid.ac.cn/handle/1471x/984772.
[43] Yeh, ShuDan, von Grotthuss, Marcin, Gandasetiawan, Kania A, Jayasekera, Suvini, Xia, XiaoQin, Chan, Carolus, Jayaswal, Vivek, Ranz, Jose M. Functional Divergence of the miRNA Transcriptome at the Onset of Drosophila Metamorphosis. MOLECULAR BIOLOGY AND EVOLUTION[J]. 2014, 31(10): 2557-2572, http://dx.doi.org/10.1093/molbev/msu195.
[44] Jia, Zhenyu, Lilly, Michael B, Koziol, James A, Chen, Xin, Xia, XiaoQin, Wang, Yipeng, Skarecky, Douglas, Sutton, Manuel, Sawyers, Anne, Ruckle, Herbert, Carpenter, Philip M, WangRodriguez, Jessica, Jiang, Jun, Deng, Mingsen, Pan, Cong, Zhu, Jianguo, McLaren, Christine E, Gurley, Michael J, Lee, Chung, McClelland, Michael, Ahlering, Thomas, Kattan, Michael W, Mercola, Dan. Generation of "Virtual" Control Groups for Single Arm Prostate Cancer Adjuvant Trials. PLOS ONE[J]. 2014, 9(1): https://doaj.org/article/5af32894460a47e58eb7a65777f2bdf3.
[45] Datta, Sujay, Xia, XiaoQin, Bhattacharjee, Samsiddhi, Jia, Zhenyu. Advances in Statistical Medicine. COMPUTATIONAL AND MATHEMATICAL METHODS IN MEDICINE[J]. 2014, 2014: http://www.irgrid.ac.cn/handle/1471x/929277.
[46] Jia, Zhenyu, Wang, Yipeng, Hu, Yuanjie, McLaren, Christine, Yu, Yingyan, Ye, Kai, Xia, XiaoQin, Koziol, James A, Lernhardt, Waldemar, McClelland, Michael, Mercola, Dan. A Sample Selection Strategy to Boost the Statistical Power of Signature Detection in Cancer Expression Profile Studies. ANTI-CANCER AGENTS IN MEDICINAL CHEMISTRY[J]. 2013, 13(2): 203-211, http://www.irgrid.ac.cn/handle/1471x/733515.
[47] DiazCastillo, Carlos, Xia, XiaoQin, Ranz, Jose M. Evaluation of the Role of Functional Constraints on the Integrity of an Ultraconserved Region in the Genus Drosophila. PLOS GENETICS[J]. 2012, 8(2): http://www.irgrid.ac.cn/handle/1471x/390468.
[48] Jia, Zhenyu, Rahmatpanah, Farah B, Chen, Xin, Lernhardt, Waldemar, Wang, Yipeng, Xia, XiaoQin, Sawyers, Anne, Sutton, Manuel, McClelland, Michael, Mercola, Dan. Expression Changes in the Stroma of Prostate Cancer Predict Subsequent Relapse. PLOS ONE[J]. 2012, 7(8): https://doaj.org/article/0990705d8f08431f9584763664402089.
[49] Canals, Rocio, Xia, XiaoQin, Fronick, Catrina, Clifton, Sandra W, Ahmer, Brian M M, AndrewsPolymenis, Helene L, Porwollik, Steffen, McClelland, Michael. High-throughput comparison of gene fitness among related bacteria. BMC GENOMICS[J]. 2012, 13(1): 212-212, http://www.irgrid.ac.cn/handle/1471x/533467.
[50] Bie, Li, Zhao, Gang, Cheng, Pui, Rondeau, Gaelle, Porwollik, Steffen, Ju, Yan, Xia, XiaoQin, McClelland, Michael. The Accuracy of Survival Time Prediction for Patients with Glioma Is Improved by Measuring Mitotic Spindle Checkpoint Gene Expression. PLOSONE[J]. 2011, 6(10): http://www.irgrid.ac.cn/handle/1471x/335933.
[51] 夏晓勤. PypeR, a Python package for using R in Python. Journal of Statistical Software. 2010, [52] Xia, XiaoQin, Jia, Zhenyu, Porwollik, Steffen, Long, Fred, Hoemme, Claudia, Ye, Kai, MullerTidow, Carsten, McClelland, Michael, Wang, Yipeng. Evaluating oligonucleotide properties for DNA microarray probe design. NUCLEIC ACIDS RESEARCH[J]. 2010, 38(11): e121-e121, https://www.webofscience.com/wos/woscc/full-record/WOS:000279188800003.
[53] Kucerova, Eva, Clifton, Sandra W, Xia, XiaoQin, Long, Fred, Porwollik, Steffen, Fulton, Lucinda, Fronick, Catrina, Minx, Patrick, Kyung, Kim, Warren, Wesley, Fulton, Robert, Feng, Dongyan, Wollam, Aye, Shah, Neha, Bhonagiri, Veena, Nash, William E, HallsworthPepin, Kymberlie, Wilson, Richard K, McClelland, Michael, Forsythe, Stephen J. Genome Sequence of Cronobacter sakazakii BAA-894 and Comparative Genomic Hybridization Analysis with Other Cronobacter Species. PLOS ONE[J]. 2010, 5(3): A51-A60, https://doaj.org/article/974008e5cb774faa9235f7196207b31c.
[54] Wang, Yipeng, Xia, XiaoQin, Jia, Zhenyu, Sawyers, Anne, Yao, Huazhen, WangRodriquez, Jessica, Mercola, Dan, McClelland, Michael. In silico Estimates of Tissue Components in Surgical Samples Based on Expression Profiling Data. CANCER RESEARCH[J]. 2010, 70(16): 6448-6455, http://dx.doi.org/10.1158/0008-5472.CAN-10-0021.
[55] 夏晓勤. TabSQL - a MySQL tools to facilitate data queries with public databases. BMC Bioinformatics. 2010, [56] Xia, XiaoQin, McClelland, Michael, Porwollik, Steffen, Song, Wenzhi, Cong, Xianling, Wang, Yipeng. WebArrayDB: cross-platform microarray data analysis and public data repository. BIOINFORMATICS[J]. 2009, 25(18): 2425-2429, https://www.webofscience.com/wos/woscc/full-record/WOS:000269607700020.
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